TACC: Starting up job 4154897 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186381.09 Mb (on task= 405), Smallest = 185939.55 Mb (on task= 162), Average = 186043.69 Mb Total Mem: Largest = 191386.89 Mb (on task= 54), Smallest = 191386.88 Mb (on task= 378), Average = 191386.89 Mb Committed_AS: Largest = 5447.34 Mb (on task= 162), Smallest = 5005.80 Mb (on task= 405), Average = 5343.20 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5447.34 Mb (on task= 162), Smallest = 5005.80 Mb (on task= 405), Average = 5343.20 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 373), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-027.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 18.6393 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_271.hdf5' contains: READIC: Type 0 (gas): 55952572 (tot= 55952572) masstab= 0 READIC: Type 1: 78148621 (tot= 78148621) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 1183 (tot= 1183) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_271.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.15428 sec, total size 6352.16 MB, corresponds to effective I/O rate of 1529.07 MB/sec READIC: Total number of particles : 134102376 INIT: Testing ID uniqueness... INIT: success. took=0.0697354 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=18096, determination of top-level tree involved 6 iterations and took 0.43727 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=190 for nextra=19, reaching maximum imbalance of 1.1234|1.1238 DOMAIN: combining multiple-domains took 0.0146656 sec DOMAIN: exchange of 78149804 particles DOMAIN: particle exchange done. (took 0.289208 sec) DOMAIN: domain decomposition done. (took in total 0.748313 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0426531 sec. INIT: Converting u -> entropy All.cf_a3inv=432.081 FOF: Begin to compute FoF group catalogue... (presently allocated=111.199 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0680119 sec =79921.9 NTopnodes=20681 NTopleaves=18096 FOF: Start linking particles (presently allocated=126.854 MB) FOF: linking of small cells took 0.000923023 sec FOF: local links done (took 0.105229 sec, avg-work=0.091624, imbalance=1.12771). FOF: Marked=220285 out of the 78148621 primaries which are linked FOF: begin linking across processors (presently allocated=128.151 MB) FOF: have done 23892 cross links (processed 220285, took 0.00522399 sec) FOF: have done 4448 cross links (processed 103213, took 0.00438507 sec) FOF: have done 686 cross links (processed 14421, took 0.0035603 sec) FOF: have done 99 cross links (processed 2193, took 0.00318201 sec) FOF: have done 7 cross links (processed 310, took 0.00311798 sec) FOF: have done 0 cross links (processed 17, took 0.00304076 sec) FOF: Local groups found. FOF: primary group finding took = 0.134508 sec FOF: Start finding nearest dm-particle (presently allocated=126.854 MB) FOF: fof-nearest iteration 1: need to repeat for 55297266 particles. (took = 0.0564561 sec) FOF: fof-nearest iteration 2: need to repeat for 51885162 particles. (took = 0.0598991 sec) FOF: fof-nearest iteration 3: need to repeat for 40548910 particles. (took = 0.0652866 sec) FOF: fof-nearest iteration 4: need to repeat for 21979093 particles. (took = 0.060188 sec) FOF: fof-nearest iteration 5: need to repeat for 5396094 particles. (took = 0.0403248 sec) FOF: fof-nearest iteration 6: need to repeat for 172447 particles. (took = 0.0148097 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.302905 sec FOF: compiling local group data and catalogue took = 0.0186084 sec FOF: Total number of FOF groups with at least 32 particles: 3461176 FOF: Largest FOF group has 78 particles. FOF: Total number of particles in FOF groups: 134102376 FOF: group properties are now allocated.. (presently allocated=116.338 MB) FOF: computation of group properties took = 0.0119397 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.22503 sec FOF: Finished computing FoF groups. Complete work took 0.883947 sec (presently allocated=113.082 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.015 MB) GRAVTREE: Tree construction done. took 0.284934 sec =99533.3 NTopnodes=20681 NTopleaves=18096 tree-build-scalability=0.792541 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 130146662 particles. (took 0.715382 sec) SUBFIND: ngb iteration 2: need to repeat for 124622344 particles. (took 0.551472 sec) SUBFIND: ngb iteration 3: need to repeat for 118597851 particles. (took 0.446548 sec) SUBFIND: ngb iteration 4: need to repeat for 112717837 particles. (took 0.379031 sec) SUBFIND: ngb iteration 5: need to repeat for 106722846 particles. (took 0.349707 sec) SUBFIND: ngb iteration 6: need to repeat for 99045776 particles. (took 0.329508 sec) SUBFIND: ngb iteration 7: need to repeat for 87751753 particles. (took 0.301043 sec) SUBFIND: ngb iteration 8: need to repeat for 74268300 particles. (took 0.253632 sec) SUBFIND: ngb iteration 9: need to repeat for 63924700 particles. (took 0.193523 sec) SUBFIND: ngb iteration 10: need to repeat for 58709134 particles. (took 0.151586 sec) SUBFIND: ngb iteration 11: need to repeat for 56763948 particles. (took 0.129899 sec) SUBFIND: ngb iteration 12: need to repeat for 56171487 particles. (took 0.120917 sec) SUBFIND: ngb iteration 13: need to repeat for 56011806 particles. (took 0.120097 sec) SUBFIND: ngb iteration 14: need to repeat for 55969365 particles. (took 0.121556 sec) SUBFIND: ngb iteration 15: need to repeat for 55957388 particles. (took 0.119441 sec) SUBFIND: ngb iteration 16: need to repeat for 55953920 particles. (took 0.11518 sec) SUBFIND: ngb iteration 17: need to repeat for 55952563 particles. (took 0.109354 sec) SUBFIND: ngb iteration 18: need to repeat for 55951275 particles. (took 0.101921 sec) SUBFIND: ngb iteration 19: need to repeat for 55948504 particles. (took 0.0952517 sec) SUBFIND: ngb iteration 20: need to repeat for 55942458 particles. (took 0.0919377 sec) SUBFIND: ngb iteration 21: need to repeat for 55929104 particles. (took 0.0924182 sec) SUBFIND: ngb iteration 22: need to repeat for 55900803 particles. (took 0.0949314 sec) SUBFIND: ngb iteration 23: need to repeat for 55838587 particles. (took 0.0981519 sec) SUBFIND: ngb iteration 24: need to repeat for 55700760 particles. (took 0.102631 sec) SUBFIND: ngb iteration 25: need to repeat for 55400498 particles. (took 0.109455 sec) SUBFIND: ngb iteration 26: need to repeat for 54768729 particles. (took 0.119 sec) SUBFIND: ngb iteration 27: need to repeat for 53538441 particles. (took 0.13211 sec) SUBFIND: ngb iteration 28: need to repeat for 51386415 particles. (took 0.149001 sec) SUBFIND: ngb iteration 29: need to repeat for 48106550 particles. (took 0.171535 sec) SUBFIND: ngb iteration 30: need to repeat for 43879246 particles. (took 0.193153 sec) SUBFIND: ngb iteration 31: need to repeat for 39152438 particles. (took 0.209538 sec) SUBFIND: ngb iteration 32: need to repeat for 34223800 particles. (took 0.211651 sec) SUBFIND: ngb iteration 33: need to repeat for 29059365 particles. (took 0.197319 sec) SUBFIND: ngb iteration 34: need to repeat for 23626060 particles. (took 0.172013 sec) SUBFIND: ngb iteration 35: need to repeat for 18059922 particles. (took 0.143811 sec) SUBFIND: ngb iteration 36: need to repeat for 12735384 particles. (took 0.115414 sec) SUBFIND: ngb iteration 37: need to repeat for 8120035 particles. (took 0.0886481 sec) SUBFIND: ngb iteration 38: need to repeat for 4567559 particles. (took 0.0627272 sec) SUBFIND: ngb iteration 39: need to repeat for 2209846 particles. (took 0.0409021 sec) SUBFIND: ngb iteration 40: need to repeat for 892920 particles. (took 0.0238945 sec) SUBFIND: ngb iteration 41: need to repeat for 291163 particles. (took 0.0127015 sec) SUBFIND: ngb iteration 42: need to repeat for 74327 particles. (took 0.00673325 sec) SUBFIND: ngb iteration 43: need to repeat for 13966 particles. (took 0.00316552 sec) SUBFIND: ngb iteration 44: need to repeat for 1877 particles. (took 0.00121312 sec) SUBFIND: ngb iteration 45: need to repeat for 198 particles. (took 0.000518801 sec) SUBFIND: ngb iteration 46: need to repeat for 10 particles. (took 0.00032559 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 7.35488 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134102376 particles, for threshold size factor 0.6) SUBFIND: The other 3461176 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.0078403 sec SUBFIND: particle balance=1.1234 SUBFIND: subfind_exchange() took 0.372707 sec SUBFIND: particle balance for processing=1.00031 SUBFIND: subdomain decomposition took 0.0691176 sec SUBFIND: serial subfind subdomain decomposition took 0.0685342 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=5342 took 82.1392 sec SUBFIND: root-task=0: Serial processing of halo 0 took 82.3071 SUBFIND: Processing overall took (total time=83.0579 sec) SUBFIND: 0 out of 0 decisions, fraction -nan, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344915 ALLOCATE: Changing to MaxPartSph = 143911 SUBFIND: subfind_exchange() (for return to original CPU) took 0.404308 sec TREE: Full tree construction for all particles. (presently allocated=103.529 MB) GRAVTREE: Tree construction done. took 1.08585 sec =99533.3 NTopnodes=20681 NTopleaves=18096 tree-build-scalability=0.792541 SUBFIND: SO iteration 1: need to repeat for 3459406 halo centers. (took 0.0374569 sec) SUBFIND: SO iteration 2: need to repeat for 3459406 halo centers. (took 0.036911 sec) SUBFIND: SO iteration 3: need to repeat for 3459406 halo centers. (took 0.0346284 sec) SUBFIND: SO iteration 4: need to repeat for 3459406 halo centers. (took 0.0334625 sec) SUBFIND: SO iteration 5: need to repeat for 3459406 halo centers. (took 0.031374 sec) SUBFIND: SO iteration 6: need to repeat for 3459406 halo centers. (took 0.0301257 sec) SUBFIND: SO iteration 7: need to repeat for 3459406 halo centers. (took 0.0286834 sec) SUBFIND: SO iteration 8: need to repeat for 3459406 halo centers. (took 0.0293452 sec) SUBFIND: SO iteration 9: need to repeat for 3459406 halo centers. (took 0.0316946 sec) SUBFIND: SO iteration 10: need to repeat for 3459406 halo centers. (took 0.0316224 sec) SUBFIND: SO iteration 11: need to repeat for 3459406 halo centers. (took 0.032986 sec) SUBFIND: SO iteration 12: need to repeat for 3459406 halo centers. (took 0.0324916 sec) SUBFIND: SO iteration 13: need to repeat for 3459406 halo centers. (took 0.0294264 sec) SUBFIND: SO iteration 14: need to repeat for 3459406 halo centers. (took 0.0293511 sec) SUBFIND: SO iteration 15: need to repeat for 3459406 halo centers. (took 0.0304017 sec) SUBFIND: SO iteration 16: need to repeat for 525420 halo centers. (took 0.0304973 sec) SUBFIND: SO iteration 17: need to repeat for 14417 halo centers. (took 0.0130303 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.00174767 sec) SUBFIND: SO iteration 1: need to repeat for 3459406 halo centers. (took 0.0309017 sec) SUBFIND: SO iteration 2: need to repeat for 3459406 halo centers. (took 0.0284263 sec) SUBFIND: SO iteration 3: need to repeat for 3459406 halo centers. (took 0.0289905 sec) SUBFIND: SO iteration 4: need to repeat for 3459406 halo centers. (took 0.028764 sec) SUBFIND: SO iteration 5: need to repeat for 3459406 halo centers. (took 0.0287711 sec) SUBFIND: SO iteration 6: need to repeat for 3459406 halo centers. (took 0.0287052 sec) SUBFIND: SO iteration 7: need to repeat for 3459406 halo centers. (took 0.0287945 sec) SUBFIND: SO iteration 8: need to repeat for 3459406 halo centers. (took 0.0288721 sec) SUBFIND: SO iteration 9: need to repeat for 3459406 halo centers. (took 0.0288331 sec) SUBFIND: SO iteration 10: need to repeat for 3459406 halo centers. (took 0.0287325 sec) SUBFIND: SO iteration 11: need to repeat for 3459406 halo centers. (took 0.0287763 sec) SUBFIND: SO iteration 12: need to repeat for 3459406 halo centers. (took 0.0289997 sec) SUBFIND: SO iteration 13: need to repeat for 3459406 halo centers. (took 0.0288387 sec) SUBFIND: SO iteration 14: need to repeat for 3459406 halo centers. (took 0.0287087 sec) SUBFIND: SO iteration 15: need to repeat for 3459406 halo centers. (took 0.0286977 sec) SUBFIND: SO iteration 16: need to repeat for 336460 halo centers. (took 0.0278801 sec) SUBFIND: SO iteration 17: need to repeat for 11003 halo centers. (took 0.0100053 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.00127216 sec) SUBFIND: SO iteration 1: need to repeat for 3459406 halo centers. (took 0.0292083 sec) SUBFIND: SO iteration 2: need to repeat for 3459406 halo centers. (took 0.0282923 sec) SUBFIND: SO iteration 3: need to repeat for 3459406 halo centers. (took 0.0287578 sec) SUBFIND: SO iteration 4: need to repeat for 3459406 halo centers. (took 0.0286498 sec) SUBFIND: SO iteration 5: need to repeat for 3459406 halo centers. (took 0.0286922 sec) SUBFIND: SO iteration 6: need to repeat for 3459406 halo centers. (took 0.0286718 sec) SUBFIND: SO iteration 7: need to repeat for 3459406 halo centers. (took 0.028983 sec) SUBFIND: SO iteration 8: need to repeat for 3459406 halo centers. (took 0.0287582 sec) SUBFIND: SO iteration 9: need to repeat for 3459406 halo centers. (took 0.0286609 sec) SUBFIND: SO iteration 10: need to repeat for 3459406 halo centers. (took 0.028699 sec) SUBFIND: SO iteration 11: need to repeat for 3459406 halo centers. (took 0.0287688 sec) SUBFIND: SO iteration 12: need to repeat for 3459406 halo centers. (took 0.0293112 sec) SUBFIND: SO iteration 13: need to repeat for 3459406 halo centers. (took 0.0312239 sec) SUBFIND: SO iteration 14: need to repeat for 3459406 halo centers. (took 0.0293843 sec) SUBFIND: SO iteration 15: need to repeat for 3459406 halo centers. (took 0.0312216 sec) SUBFIND: SO iteration 16: need to repeat for 531257 halo centers. (took 0.0320523 sec) SUBFIND: SO iteration 17: need to repeat for 14474 halo centers. (took 0.0196907 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.00178652 sec) SUBFIND: SO iteration 1: need to repeat for 3459406 halo centers. (took 0.0317518 sec) SUBFIND: SO iteration 2: need to repeat for 3459406 halo centers. (took 0.0351437 sec) SUBFIND: SO iteration 3: need to repeat for 3459406 halo centers. (took 0.0327836 sec) SUBFIND: SO iteration 4: need to repeat for 3459406 halo centers. (took 0.0331103 sec) SUBFIND: SO iteration 5: need to repeat for 3459406 halo centers. (took 0.0321741 sec) SUBFIND: SO iteration 6: need to repeat for 3459406 halo centers. (took 0.0348625 sec) SUBFIND: SO iteration 7: need to repeat for 3459406 halo centers. (took 0.0315148 sec) SUBFIND: SO iteration 8: need to repeat for 3459406 halo centers. (took 0.0293882 sec) SUBFIND: SO iteration 9: need to repeat for 3459406 halo centers. (took 0.0283363 sec) SUBFIND: SO iteration 10: need to repeat for 3459406 halo centers. (took 0.0318279 sec) SUBFIND: SO iteration 11: need to repeat for 3459406 halo centers. (took 0.0305799 sec) SUBFIND: SO iteration 12: need to repeat for 3459406 halo centers. (took 0.0302806 sec) SUBFIND: SO iteration 13: need to repeat for 3459406 halo centers. (took 0.0326703 sec) SUBFIND: SO iteration 14: need to repeat for 3459406 halo centers. (took 0.0335744 sec) SUBFIND: SO iteration 15: need to repeat for 3459406 halo centers. (took 0.0278968 sec) SUBFIND: SO iteration 16: need to repeat for 3213622 halo centers. (took 0.0277625 sec) SUBFIND: SO iteration 17: need to repeat for 372213 halo centers. (took 0.025678 sec) SUBFIND: SO iteration 18: need to repeat for 63458 halo centers. (took 0.0102402 sec) SUBFIND: determining spherical overdensity masses took 2.03988 sec SUBFIND: assembled and ordered groups and subhalos (took 0.203033 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_271' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 3.24923 sec, total size 1293.56 MB, corresponds to effective I/O rate of 398.113 MB/sec SUBFIND: Subgroup catalogues saved. took = 3.25153 sec SUBFIND: Finished with SUBFIND. (total time=98.1485 sec) SUBFIND: Total number of subhalos with at least 20 particles: 3459406 SUBFIND: Largest subhalo has 78 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134029725 FOF: preparing output order of particles took 1.28902 sec SNAPSHOT: writing snapshot file #271 @ time 0.132275 ... SNAPSHOT: writing snapshot file: 'output/snap_271' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_271.hdf5' to 'output/bak-snap_271.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.23116 sec, total size 5244.37 MB, corresponds to effective I/O rate of 637.136 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 156 (rank 156 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 155 (rank 155 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 187 (rank 187 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 157 (rank 157 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 166 (rank 166 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.