TACC: Starting up job 4153615 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186215.24 Mb (on task= 621), Smallest = 185784.77 Mb (on task= 243), Average = 185984.19 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5602.12 Mb (on task= 243), Smallest = 5171.65 Mb (on task= 621), Average = 5402.70 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5602.12 Mb (on task= 243), Smallest = 5171.65 Mb (on task= 621), Average = 5402.70 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 327), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c204-008.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.4108 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_271.hdf5' contains: READIC: Type 0 (gas): 56312871 (tot= 56312871) masstab= 0 READIC: Type 1: 77788415 (tot= 77788415) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 1102 (tot= 1102) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_271.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.28999 sec, total size 6353.54 MB, corresponds to effective I/O rate of 1481.02 MB/sec READIC: Total number of particles : 134102388 INIT: Testing ID uniqueness... INIT: success. took=0.0719648 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=18915, determination of top-level tree involved 6 iterations and took 0.450037 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=186 for nextra=117, reaching maximum imbalance of 1.12158|1.12178 DOMAIN: combining multiple-domains took 0.0144417 sec DOMAIN: exchange of 77789517 particles DOMAIN: particle exchange done. (took 0.292496 sec) DOMAIN: domain decomposition done. (took in total 0.764502 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0443905 sec. INIT: Converting u -> entropy All.cf_a3inv=432.081 FOF: Begin to compute FoF group catalogue... (presently allocated=111.393 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0675845 sec =79040.5 NTopnodes=21617 NTopleaves=18915 FOF: Start linking particles (presently allocated=127.101 MB) FOF: linking of small cells took 0.00108364 sec FOF: local links done (took 0.105353 sec, avg-work=0.0919154, imbalance=1.12802). FOF: Marked=208133 out of the 77788415 primaries which are linked FOF: begin linking across processors (presently allocated=128.406 MB) FOF: have done 22282 cross links (processed 208133, took 0.00515259 sec) FOF: have done 4230 cross links (processed 98709, took 0.00425354 sec) FOF: have done 678 cross links (processed 14064, took 0.00344292 sec) FOF: have done 108 cross links (processed 2090, took 0.00325753 sec) FOF: have done 14 cross links (processed 323, took 0.00311464 sec) FOF: have done 2 cross links (processed 33, took 0.00307986 sec) FOF: have done 0 cross links (processed 4, took 0.003078 sec) FOF: Local groups found. FOF: primary group finding took = 0.137892 sec FOF: Start finding nearest dm-particle (presently allocated=127.101 MB) FOF: fof-nearest iteration 1: need to repeat for 55635250 particles. (took = 0.0562047 sec) FOF: fof-nearest iteration 2: need to repeat for 52122650 particles. (took = 0.059492 sec) FOF: fof-nearest iteration 3: need to repeat for 40517032 particles. (took = 0.0646553 sec) FOF: fof-nearest iteration 4: need to repeat for 21652649 particles. (took = 0.0594562 sec) FOF: fof-nearest iteration 5: need to repeat for 5124953 particles. (took = 0.0393825 sec) FOF: fof-nearest iteration 6: need to repeat for 157110 particles. (took = 0.0137931 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.298732 sec FOF: compiling local group data and catalogue took = 0.0182386 sec FOF: Total number of FOF groups with at least 32 particles: 3192909 FOF: Largest FOF group has 84 particles. FOF: Total number of particles in FOF groups: 134102388 FOF: group properties are now allocated.. (presently allocated=116.443 MB) FOF: computation of group properties took = 0.0110418 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.205646 sec FOF: Finished computing FoF groups. Complete work took 0.848428 sec (presently allocated=113.16 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.081 MB) GRAVTREE: Tree construction done. took 0.27833 sec =98526.8 NTopnodes=21617 NTopleaves=18915 tree-build-scalability=0.780936 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 132872164 particles. (took 0.828654 sec) SUBFIND: ngb iteration 2: need to repeat for 130990514 particles. (took 0.596313 sec) SUBFIND: ngb iteration 3: need to repeat for 128587142 particles. (took 0.490401 sec) SUBFIND: ngb iteration 4: need to repeat for 125606165 particles. (took 0.43763 sec) SUBFIND: ngb iteration 5: need to repeat for 121377435 particles. (took 0.415229 sec) SUBFIND: ngb iteration 6: need to repeat for 114242349 particles. (took 0.403423 sec) SUBFIND: ngb iteration 7: need to repeat for 101783329 particles. (took 0.377268 sec) SUBFIND: ngb iteration 8: need to repeat for 84467745 particles. (took 0.325468 sec) SUBFIND: ngb iteration 9: need to repeat for 69317900 particles. (took 0.257703 sec) SUBFIND: ngb iteration 10: need to repeat for 61053259 particles. (took 0.199747 sec) SUBFIND: ngb iteration 11: need to repeat for 57789373 particles. (took 0.162543 sec) SUBFIND: ngb iteration 12: need to repeat for 56743892 particles. (took 0.145414 sec) SUBFIND: ngb iteration 13: need to repeat for 56443689 particles. (took 0.136241 sec) SUBFIND: ngb iteration 14: need to repeat for 56354941 particles. (took 0.129218 sec) SUBFIND: ngb iteration 15: need to repeat for 56326373 particles. (took 0.12481 sec) SUBFIND: ngb iteration 16: need to repeat for 56317106 particles. (took 0.120475 sec) SUBFIND: ngb iteration 17: need to repeat for 56313616 particles. (took 0.114101 sec) SUBFIND: ngb iteration 18: need to repeat for 56311649 particles. (took 0.105791 sec) SUBFIND: ngb iteration 19: need to repeat for 56309164 particles. (took 0.0984805 sec) SUBFIND: ngb iteration 20: need to repeat for 56304232 particles. (took 0.0950137 sec) SUBFIND: ngb iteration 21: need to repeat for 56294257 particles. (took 0.0951368 sec) SUBFIND: ngb iteration 22: need to repeat for 56274370 particles. (took 0.0973929 sec) SUBFIND: ngb iteration 23: need to repeat for 56232987 particles. (took 0.101014 sec) SUBFIND: ngb iteration 24: need to repeat for 56146492 particles. (took 0.10527 sec) SUBFIND: ngb iteration 25: need to repeat for 55965676 particles. (took 0.111846 sec) SUBFIND: ngb iteration 26: need to repeat for 55599622 particles. (took 0.120293 sec) SUBFIND: ngb iteration 27: need to repeat for 54911941 particles. (took 0.133089 sec) SUBFIND: ngb iteration 28: need to repeat for 53735603 particles. (took 0.1504 sec) SUBFIND: ngb iteration 29: need to repeat for 51947538 particles. (took 0.175973 sec) SUBFIND: ngb iteration 30: need to repeat for 49541867 particles. (took 0.204021 sec) SUBFIND: ngb iteration 31: need to repeat for 46530735 particles. (took 0.230786 sec) SUBFIND: ngb iteration 32: need to repeat for 42828531 particles. (took 0.245371 sec) SUBFIND: ngb iteration 33: need to repeat for 38241381 particles. (took 0.240018 sec) SUBFIND: ngb iteration 34: need to repeat for 32671973 particles. (took 0.221861 sec) SUBFIND: ngb iteration 35: need to repeat for 26311233 particles. (took 0.196718 sec) SUBFIND: ngb iteration 36: need to repeat for 19626651 particles. (took 0.166567 sec) SUBFIND: ngb iteration 37: need to repeat for 13286659 particles. (took 0.133797 sec) SUBFIND: ngb iteration 38: need to repeat for 7985986 particles. (took 0.10074 sec) SUBFIND: ngb iteration 39: need to repeat for 4151606 particles. (took 0.0691278 sec) SUBFIND: ngb iteration 40: need to repeat for 1803933 particles. (took 0.0426059 sec) SUBFIND: ngb iteration 41: need to repeat for 639753 particles. (took 0.0236327 sec) SUBFIND: ngb iteration 42: need to repeat for 178255 particles. (took 0.0115964 sec) SUBFIND: ngb iteration 43: need to repeat for 37330 particles. (took 0.00483671 sec) SUBFIND: ngb iteration 44: need to repeat for 5772 particles. (took 0.00166899 sec) SUBFIND: ngb iteration 45: need to repeat for 665 particles. (took 0.000590427 sec) SUBFIND: ngb iteration 46: need to repeat for 56 particles. (took 0.000267276 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 8.5536 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134102388 particles, for threshold size factor 0.6) SUBFIND: The other 3192909 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00607622 sec SUBFIND: particle balance=1.12158 SUBFIND: subfind_exchange() took 0.356063 sec SUBFIND: particle balance for processing=1.00034 SUBFIND: subdomain decomposition took 0.0692292 sec SUBFIND: serial subfind subdomain decomposition took 0.0686123 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=4928 took 76.0225 sec SUBFIND: root-task=0: Serial processing of halo 0 took 76.1908 SUBFIND: Processing overall took (total time=76.6512 sec) SUBFIND: 0 out of 59 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344915 ALLOCATE: Changing to MaxPartSph = 144838 SUBFIND: subfind_exchange() (for return to original CPU) took 0.389396 sec TREE: Full tree construction for all particles. (presently allocated=103.816 MB) GRAVTREE: Tree construction done. took 1.00094 sec =98526.8 NTopnodes=21617 NTopleaves=18915 tree-build-scalability=0.780936 SUBFIND: SO iteration 1: need to repeat for 3191648 halo centers. (took 0.0313852 sec) SUBFIND: SO iteration 2: need to repeat for 3191648 halo centers. (took 0.027286 sec) SUBFIND: SO iteration 3: need to repeat for 3191648 halo centers. (took 0.0274732 sec) SUBFIND: SO iteration 4: need to repeat for 3191648 halo centers. (took 0.0275382 sec) SUBFIND: SO iteration 5: need to repeat for 3191648 halo centers. (took 0.0274135 sec) SUBFIND: SO iteration 6: need to repeat for 3191648 halo centers. (took 0.0274758 sec) SUBFIND: SO iteration 7: need to repeat for 3191648 halo centers. (took 0.027371 sec) SUBFIND: SO iteration 8: need to repeat for 3191648 halo centers. (took 0.0276455 sec) SUBFIND: SO iteration 9: need to repeat for 3191648 halo centers. (took 0.027548 sec) SUBFIND: SO iteration 10: need to repeat for 3191648 halo centers. (took 0.0277238 sec) SUBFIND: SO iteration 11: need to repeat for 3191648 halo centers. (took 0.0276277 sec) SUBFIND: SO iteration 12: need to repeat for 3191648 halo centers. (took 0.0274323 sec) SUBFIND: SO iteration 13: need to repeat for 3191648 halo centers. (took 0.027564 sec) SUBFIND: SO iteration 14: need to repeat for 3191648 halo centers. (took 0.0274837 sec) SUBFIND: SO iteration 15: need to repeat for 3191648 halo centers. (took 0.0274764 sec) SUBFIND: SO iteration 16: need to repeat for 450240 halo centers. (took 0.0266269 sec) SUBFIND: SO iteration 17: need to repeat for 9899 halo centers. (took 0.011048 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.00113962 sec) SUBFIND: SO iteration 1: need to repeat for 3191648 halo centers. (took 0.0278202 sec) SUBFIND: SO iteration 2: need to repeat for 3191648 halo centers. (took 0.0270752 sec) SUBFIND: SO iteration 3: need to repeat for 3191648 halo centers. (took 0.027472 sec) SUBFIND: SO iteration 4: need to repeat for 3191648 halo centers. (took 0.0275027 sec) SUBFIND: SO iteration 5: need to repeat for 3191648 halo centers. (took 0.0274521 sec) SUBFIND: SO iteration 6: need to repeat for 3191648 halo centers. (took 0.0274514 sec) SUBFIND: SO iteration 7: need to repeat for 3191648 halo centers. (took 0.0279599 sec) SUBFIND: SO iteration 8: need to repeat for 3191648 halo centers. (took 0.0281011 sec) SUBFIND: SO iteration 9: need to repeat for 3191648 halo centers. (took 0.0283666 sec) SUBFIND: SO iteration 10: need to repeat for 3191648 halo centers. (took 0.0278075 sec) SUBFIND: SO iteration 11: need to repeat for 3191648 halo centers. (took 0.0275391 sec) SUBFIND: SO iteration 12: need to repeat for 3191648 halo centers. (took 0.0274051 sec) SUBFIND: SO iteration 13: need to repeat for 3191648 halo centers. (took 0.0275349 sec) SUBFIND: SO iteration 14: need to repeat for 3191648 halo centers. (took 0.0274398 sec) SUBFIND: SO iteration 15: need to repeat for 3191647 halo centers. (took 0.0273916 sec) SUBFIND: SO iteration 16: need to repeat for 283457 halo centers. (took 0.0267155 sec) SUBFIND: SO iteration 17: need to repeat for 6596 halo centers. (took 0.00948396 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000779016 sec) SUBFIND: SO iteration 1: need to repeat for 3191648 halo centers. (took 0.0278477 sec) SUBFIND: SO iteration 2: need to repeat for 3191648 halo centers. (took 0.027095 sec) SUBFIND: SO iteration 3: need to repeat for 3191648 halo centers. (took 0.0275637 sec) SUBFIND: SO iteration 4: need to repeat for 3191648 halo centers. (took 0.027387 sec) SUBFIND: SO iteration 5: need to repeat for 3191648 halo centers. (took 0.0274087 sec) SUBFIND: SO iteration 6: need to repeat for 3191648 halo centers. (took 0.0274418 sec) SUBFIND: SO iteration 7: need to repeat for 3191648 halo centers. (took 0.0273129 sec) SUBFIND: SO iteration 8: need to repeat for 3191648 halo centers. (took 0.027505 sec) SUBFIND: SO iteration 9: need to repeat for 3191648 halo centers. (took 0.0273589 sec) SUBFIND: SO iteration 10: need to repeat for 3191648 halo centers. (took 0.0274581 sec) SUBFIND: SO iteration 11: need to repeat for 3191648 halo centers. (took 0.0279172 sec) SUBFIND: SO iteration 12: need to repeat for 3191648 halo centers. (took 0.0285781 sec) SUBFIND: SO iteration 13: need to repeat for 3191648 halo centers. (took 0.028376 sec) SUBFIND: SO iteration 14: need to repeat for 3191648 halo centers. (took 0.0293279 sec) SUBFIND: SO iteration 15: need to repeat for 3191648 halo centers. (took 0.0281919 sec) SUBFIND: SO iteration 16: need to repeat for 464856 halo centers. (took 0.0276397 sec) SUBFIND: SO iteration 17: need to repeat for 9913 halo centers. (took 0.0114793 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.00115072 sec) SUBFIND: SO iteration 1: need to repeat for 3191648 halo centers. (took 0.0290103 sec) SUBFIND: SO iteration 2: need to repeat for 3191648 halo centers. (took 0.0277672 sec) SUBFIND: SO iteration 3: need to repeat for 3191648 halo centers. (took 0.0263056 sec) SUBFIND: SO iteration 4: need to repeat for 3191648 halo centers. (took 0.0267836 sec) SUBFIND: SO iteration 5: need to repeat for 3191648 halo centers. (took 0.0268223 sec) SUBFIND: SO iteration 6: need to repeat for 3191648 halo centers. (took 0.0267624 sec) SUBFIND: SO iteration 7: need to repeat for 3191648 halo centers. (took 0.0266958 sec) SUBFIND: SO iteration 8: need to repeat for 3191648 halo centers. (took 0.0267419 sec) SUBFIND: SO iteration 9: need to repeat for 3191648 halo centers. (took 0.0266829 sec) SUBFIND: SO iteration 10: need to repeat for 3191648 halo centers. (took 0.0267031 sec) SUBFIND: SO iteration 11: need to repeat for 3191648 halo centers. (took 0.0266751 sec) SUBFIND: SO iteration 12: need to repeat for 3191648 halo centers. (took 0.0267171 sec) SUBFIND: SO iteration 13: need to repeat for 3191648 halo centers. (took 0.0267214 sec) SUBFIND: SO iteration 14: need to repeat for 3191648 halo centers. (took 0.0266267 sec) SUBFIND: SO iteration 15: need to repeat for 3191648 halo centers. (took 0.0267402 sec) SUBFIND: SO iteration 16: need to repeat for 2952052 halo centers. (took 0.0266625 sec) SUBFIND: SO iteration 17: need to repeat for 294735 halo centers. (took 0.0246828 sec) SUBFIND: SO iteration 18: need to repeat for 54469 halo centers. (took 0.00950758 sec) SUBFIND: determining spherical overdensity masses took 1.8387 sec SUBFIND: assembled and ordered groups and subhalos (took 0.206174 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_271' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.92202 sec, total size 1193.39 MB, corresponds to effective I/O rate of 408.413 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.92379 sec SUBFIND: Finished with SUBFIND. (total time=92.2846 sec) SUBFIND: Total number of subhalos with at least 20 particles: 3191707 SUBFIND: Largest subhalo has 84 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134045948 FOF: preparing output order of particles took 1.25462 sec SNAPSHOT: writing snapshot file #271 @ time 0.132275 ... SNAPSHOT: writing snapshot file: 'output/snap_271' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_271.hdf5' to 'output/bak-snap_271.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.12957 sec, total size 5248.49 MB, corresponds to effective I/O rate of 645.605 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 578 (rank 578 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 562 (rank 562 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 571 (rank 571 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 579 (rank 579 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 583 (rank 583 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.