TACC: Starting up job 4153614 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186324.44 Mb (on task= 243), Smallest = 185660.36 Mb (on task= 621), Average = 186014.33 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.88 Mb (on task= 378), Average = 191386.89 Mb Committed_AS: Largest = 5726.54 Mb (on task= 621), Smallest = 5062.45 Mb (on task= 243), Average = 5372.56 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5726.54 Mb (on task= 621), Smallest = 5062.45 Mb (on task= 243), Average = 5372.56 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 581), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c208-001.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 14.1449 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_271.hdf5' contains: READIC: Type 0 (gas): 65319048 (tot= 65319048) masstab= 0 READIC: Type 1: 68720273 (tot= 68720273) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 62914 (tot= 62914) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_271.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.65731 sec, total size 6387.89 MB, corresponds to effective I/O rate of 1371.58 MB/sec READIC: Total number of particles : 134102235 INIT: Testing ID uniqueness... INIT: success. took=0.058953 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=30115, determination of top-level tree involved 5 iterations and took 0.459001 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=166 for nextra=75, reaching maximum imbalance of 1.10278|1.1043 DOMAIN: combining multiple-domains took 0.0171288 sec DOMAIN: exchange of 68783187 particles DOMAIN: particle exchange done. (took 0.309533 sec) DOMAIN: domain decomposition done. (took in total 0.793188 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0469728 sec. INIT: Converting u -> entropy All.cf_a3inv=432.081 FOF: Begin to compute FoF group catalogue... (presently allocated=116.082 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.108377 sec =66832.8 NTopnodes=34417 NTopleaves=30115 FOF: Start linking particles (presently allocated=128.766 MB) FOF: linking of small cells took 0.00131463 sec FOF: local links done (took 0.109815 sec, avg-work=0.0984452, imbalance=1.10717). FOF: Marked=175226 out of the 68720273 primaries which are linked FOF: begin linking across processors (presently allocated=130.052 MB) FOF: have done 11321 cross links (processed 175226, took 0.0046494 sec) FOF: have done 2550 cross links (processed 83541, took 0.00386221 sec) FOF: have done 411 cross links (processed 11166, took 0.00334243 sec) FOF: have done 60 cross links (processed 1786, took 0.00314868 sec) FOF: have done 5 cross links (processed 230, took 0.003074 sec) FOF: have done 0 cross links (processed 12, took 0.00299869 sec) FOF: Local groups found. FOF: primary group finding took = 0.138374 sec FOF: Start finding nearest dm-particle (presently allocated=128.766 MB) FOF: fof-nearest iteration 1: need to repeat for 63208436 particles. (took = 0.0693475 sec) FOF: fof-nearest iteration 2: need to repeat for 52884746 particles. (took = 0.0794482 sec) FOF: fof-nearest iteration 3: need to repeat for 29623725 particles. (took = 0.0857618 sec) FOF: fof-nearest iteration 4: need to repeat for 9911446 particles. (took = 0.059355 sec) FOF: fof-nearest iteration 5: need to repeat for 1356834 particles. (took = 0.0254899 sec) FOF: fof-nearest iteration 6: need to repeat for 39782 particles. (took = 0.00648487 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.33172 sec FOF: compiling local group data and catalogue took = 0.0168959 sec FOF: Total number of FOF groups with at least 32 particles: 788505 FOF: Largest FOF group has 171 particles. FOF: Total number of particles in FOF groups: 134102235 FOF: group properties are now allocated.. (presently allocated=119.831 MB) FOF: computation of group properties took = 0.00619725 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.164818 sec FOF: Finished computing FoF groups. Complete work took 0.858738 sec (presently allocated=116.529 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.487 MB) GRAVTREE: Tree construction done. took 0.3557 sec =86170.6 NTopnodes=34417 NTopleaves=30115 tree-build-scalability=0.601211 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 134002795 particles. (took 0.636389 sec) SUBFIND: ngb iteration 2: need to repeat for 133950446 particles. (took 0.527804 sec) SUBFIND: ngb iteration 3: need to repeat for 133904537 particles. (took 0.47155 sec) SUBFIND: ngb iteration 4: need to repeat for 133871061 particles. (took 0.444457 sec) SUBFIND: ngb iteration 5: need to repeat for 133843885 particles. (took 0.433772 sec) SUBFIND: ngb iteration 6: need to repeat for 133820473 particles. (took 0.436068 sec) SUBFIND: ngb iteration 7: need to repeat for 133798612 particles. (took 0.445627 sec) SUBFIND: ngb iteration 8: need to repeat for 133776036 particles. (took 0.465301 sec) SUBFIND: ngb iteration 9: need to repeat for 133755949 particles. (took 0.489218 sec) SUBFIND: ngb iteration 10: need to repeat for 133739195 particles. (took 0.516017 sec) SUBFIND: ngb iteration 11: need to repeat for 133368500 particles. (took 0.545254 sec) SUBFIND: ngb iteration 12: need to repeat for 128566990 particles. (took 0.572906 sec) SUBFIND: ngb iteration 13: need to repeat for 118399417 particles. (took 0.576357 sec) SUBFIND: ngb iteration 14: need to repeat for 105540420 particles. (took 0.552604 sec) SUBFIND: ngb iteration 15: need to repeat for 93052739 particles. (took 0.511563 sec) SUBFIND: ngb iteration 16: need to repeat for 82080031 particles. (took 0.466041 sec) SUBFIND: ngb iteration 17: need to repeat for 71576842 particles. (took 0.423229 sec) SUBFIND: ngb iteration 18: need to repeat for 60026148 particles. (took 0.384292 sec) SUBFIND: ngb iteration 19: need to repeat for 46391110 particles. (took 0.340218 sec) SUBFIND: ngb iteration 20: need to repeat for 31517832 particles. (took 0.286412 sec) SUBFIND: ngb iteration 21: need to repeat for 18046037 particles. (took 0.222864 sec) SUBFIND: ngb iteration 22: need to repeat for 8273379 particles. (took 0.145634 sec) SUBFIND: ngb iteration 23: need to repeat for 2933511 particles. (took 0.0798609 sec) SUBFIND: ngb iteration 24: need to repeat for 807609 particles. (took 0.0341162 sec) SUBFIND: ngb iteration 25: need to repeat for 252230 particles. (took 0.0109583 sec) SUBFIND: ngb iteration 26: need to repeat for 162975 particles. (took 0.00361845 sec) SUBFIND: ngb iteration 27: need to repeat for 152531 particles. (took 0.00243069 sec) SUBFIND: ngb iteration 28: need to repeat for 149500 particles. (took 0.00296283 sec) SUBFIND: ngb iteration 29: need to repeat for 145896 particles. (took 0.00259874 sec) SUBFIND: ngb iteration 30: need to repeat for 141174 particles. (took 0.00287069 sec) SUBFIND: ngb iteration 31: need to repeat for 134726 particles. (took 0.00377836 sec) SUBFIND: ngb iteration 32: need to repeat for 125687 particles. (took 0.00384504 sec) SUBFIND: ngb iteration 33: need to repeat for 114188 particles. (took 0.00413475 sec) SUBFIND: ngb iteration 34: need to repeat for 100825 particles. (took 0.00469434 sec) SUBFIND: ngb iteration 35: need to repeat for 85540 particles. (took 0.00418603 sec) SUBFIND: ngb iteration 36: need to repeat for 68630 particles. (took 0.00339513 sec) SUBFIND: ngb iteration 37: need to repeat for 52326 particles. (took 0.00262844 sec) SUBFIND: ngb iteration 38: need to repeat for 37025 particles. (took 0.00233038 sec) SUBFIND: ngb iteration 39: need to repeat for 23385 particles. (took 0.00191137 sec) SUBFIND: ngb iteration 40: need to repeat for 13836 particles. (took 0.0018091 sec) SUBFIND: ngb iteration 41: need to repeat for 7538 particles. (took 0.00155617 sec) SUBFIND: ngb iteration 42: need to repeat for 3423 particles. (took 0.00126229 sec) SUBFIND: ngb iteration 43: need to repeat for 1130 particles. (took 0.000815982 sec) SUBFIND: ngb iteration 44: need to repeat for 201 particles. (took 0.000636688 sec) SUBFIND: ngb iteration 45: need to repeat for 23 particles. (took 0.000473501 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 10.0756 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134102235 particles, for threshold size factor 0.6) SUBFIND: The other 788505 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00299098 sec SUBFIND: particle balance=1.10278 SUBFIND: subfind_exchange() took 0.368499 sec SUBFIND: particle balance for processing=1.00015 SUBFIND: subdomain decomposition took 0.0693053 sec SUBFIND: serial subfind subdomain decomposition took 0.0687146 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1217 took 18.776 sec SUBFIND: root-task=0: Serial processing of halo 0 took 18.9452 SUBFIND: Processing overall took (total time=19.3225 sec) SUBFIND: 0 out of 13635 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344915 ALLOCATE: Changing to MaxPartSph = 168001 SUBFIND: subfind_exchange() (for return to original CPU) took 0.403898 sec TREE: Full tree construction for all particles. (presently allocated=107.674 MB) GRAVTREE: Tree construction done. took 1.03832 sec =86170.6 NTopnodes=34417 NTopleaves=30115 tree-build-scalability=0.601211 SUBFIND: SO iteration 1: need to repeat for 788505 halo centers. (took 0.018854 sec) SUBFIND: SO iteration 2: need to repeat for 788505 halo centers. (took 0.0171622 sec) SUBFIND: SO iteration 3: need to repeat for 788505 halo centers. (took 0.0170263 sec) SUBFIND: SO iteration 4: need to repeat for 788505 halo centers. (took 0.0168445 sec) SUBFIND: SO iteration 5: need to repeat for 788505 halo centers. (took 0.0165537 sec) SUBFIND: SO iteration 6: need to repeat for 788505 halo centers. (took 0.0165542 sec) SUBFIND: SO iteration 7: need to repeat for 788505 halo centers. (took 0.0165539 sec) SUBFIND: SO iteration 8: need to repeat for 788505 halo centers. (took 0.0165257 sec) SUBFIND: SO iteration 9: need to repeat for 788505 halo centers. (took 0.0165412 sec) SUBFIND: SO iteration 10: need to repeat for 788505 halo centers. (took 0.0165154 sec) SUBFIND: SO iteration 11: need to repeat for 788505 halo centers. (took 0.0165319 sec) SUBFIND: SO iteration 12: need to repeat for 788505 halo centers. (took 0.0165412 sec) SUBFIND: SO iteration 13: need to repeat for 788505 halo centers. (took 0.0166927 sec) SUBFIND: SO iteration 14: need to repeat for 788505 halo centers. (took 0.0167359 sec) SUBFIND: SO iteration 15: need to repeat for 788505 halo centers. (took 0.0169704 sec) SUBFIND: SO iteration 16: need to repeat for 15594 halo centers. (took 0.0166895 sec) SUBFIND: SO iteration 17: need to repeat for 204 halo centers. (took 0.0019273 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.000208694 sec) SUBFIND: SO iteration 1: need to repeat for 788505 halo centers. (took 0.0179714 sec) SUBFIND: SO iteration 2: need to repeat for 788505 halo centers. (took 0.0173712 sec) SUBFIND: SO iteration 3: need to repeat for 788505 halo centers. (took 0.0167965 sec) SUBFIND: SO iteration 4: need to repeat for 788505 halo centers. (took 0.0170486 sec) SUBFIND: SO iteration 5: need to repeat for 788505 halo centers. (took 0.0166263 sec) SUBFIND: SO iteration 6: need to repeat for 788505 halo centers. (took 0.0165784 sec) SUBFIND: SO iteration 7: need to repeat for 788505 halo centers. (took 0.016651 sec) SUBFIND: SO iteration 8: need to repeat for 788505 halo centers. (took 0.0166648 sec) SUBFIND: SO iteration 9: need to repeat for 788505 halo centers. (took 0.0164532 sec) SUBFIND: SO iteration 10: need to repeat for 788505 halo centers. (took 0.0165359 sec) SUBFIND: SO iteration 11: need to repeat for 788505 halo centers. (took 0.0164834 sec) SUBFIND: SO iteration 12: need to repeat for 788505 halo centers. (took 0.0164508 sec) SUBFIND: SO iteration 13: need to repeat for 788505 halo centers. (took 0.0164373 sec) SUBFIND: SO iteration 14: need to repeat for 788505 halo centers. (took 0.016451 sec) SUBFIND: SO iteration 15: need to repeat for 788505 halo centers. (took 0.0164451 sec) SUBFIND: SO iteration 16: need to repeat for 8181 halo centers. (took 0.0162804 sec) SUBFIND: SO iteration 17: need to repeat for 81 halo centers. (took 0.00112512 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000187084 sec) SUBFIND: SO iteration 1: need to repeat for 788505 halo centers. (took 0.0165083 sec) SUBFIND: SO iteration 2: need to repeat for 788505 halo centers. (took 0.0169958 sec) SUBFIND: SO iteration 3: need to repeat for 788505 halo centers. (took 0.0169076 sec) SUBFIND: SO iteration 4: need to repeat for 788505 halo centers. (took 0.0166512 sec) SUBFIND: SO iteration 5: need to repeat for 788505 halo centers. (took 0.0165173 sec) SUBFIND: SO iteration 6: need to repeat for 788505 halo centers. (took 0.0165538 sec) SUBFIND: SO iteration 7: need to repeat for 788505 halo centers. (took 0.016609 sec) SUBFIND: SO iteration 8: need to repeat for 788505 halo centers. (took 0.0165858 sec) SUBFIND: SO iteration 9: need to repeat for 788505 halo centers. (took 0.0165218 sec) SUBFIND: SO iteration 10: need to repeat for 788505 halo centers. (took 0.0165002 sec) SUBFIND: SO iteration 11: need to repeat for 788505 halo centers. (took 0.0165291 sec) SUBFIND: SO iteration 12: need to repeat for 788505 halo centers. (took 0.0165219 sec) SUBFIND: SO iteration 13: need to repeat for 788505 halo centers. (took 0.0164668 sec) SUBFIND: SO iteration 14: need to repeat for 788505 halo centers. (took 0.0165216 sec) SUBFIND: SO iteration 15: need to repeat for 788505 halo centers. (took 0.0165388 sec) SUBFIND: SO iteration 16: need to repeat for 16095 halo centers. (took 0.0163339 sec) SUBFIND: SO iteration 17: need to repeat for 213 halo centers. (took 0.00174621 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.000203034 sec) SUBFIND: SO iteration 1: need to repeat for 788505 halo centers. (took 0.016887 sec) SUBFIND: SO iteration 2: need to repeat for 788505 halo centers. (took 0.0173049 sec) SUBFIND: SO iteration 3: need to repeat for 788505 halo centers. (took 0.0172951 sec) SUBFIND: SO iteration 4: need to repeat for 788505 halo centers. (took 0.0180606 sec) SUBFIND: SO iteration 5: need to repeat for 788505 halo centers. (took 0.0189215 sec) SUBFIND: SO iteration 6: need to repeat for 788505 halo centers. (took 0.0176289 sec) SUBFIND: SO iteration 7: need to repeat for 788505 halo centers. (took 0.0182931 sec) SUBFIND: SO iteration 8: need to repeat for 788505 halo centers. (took 0.0180258 sec) SUBFIND: SO iteration 9: need to repeat for 788505 halo centers. (took 0.0181992 sec) SUBFIND: SO iteration 10: need to repeat for 788505 halo centers. (took 0.0176356 sec) SUBFIND: SO iteration 11: need to repeat for 788505 halo centers. (took 0.0175899 sec) SUBFIND: SO iteration 12: need to repeat for 788505 halo centers. (took 0.0178509 sec) SUBFIND: SO iteration 13: need to repeat for 788505 halo centers. (took 0.0177912 sec) SUBFIND: SO iteration 14: need to repeat for 788505 halo centers. (took 0.0176906 sec) SUBFIND: SO iteration 15: need to repeat for 788505 halo centers. (took 0.0172188 sec) SUBFIND: SO iteration 16: need to repeat for 431005 halo centers. (took 0.0169335 sec) SUBFIND: SO iteration 17: need to repeat for 18448 halo centers. (took 0.0132383 sec) SUBFIND: SO iteration 18: need to repeat for 665 halo centers. (took 0.00194086 sec) SUBFIND: SO iteration 19: need to repeat for 1 halo centers. (took 0.000245476 sec) SUBFIND: determining spherical overdensity masses took 1.10898 sec SUBFIND: assembled and ordered groups and subhalos (took 0.177309 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_271' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.82975 sec, total size 297.563 MB, corresponds to effective I/O rate of 105.155 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.83078 sec SUBFIND: Finished with SUBFIND. (total time=35.7535 sec) SUBFIND: Total number of subhalos with at least 20 particles: 802040 SUBFIND: Largest subhalo has 171 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134102096 FOF: preparing output order of particles took 1.26824 sec SNAPSHOT: writing snapshot file #271 @ time 0.132275 ... SNAPSHOT: writing snapshot file: 'output/snap_271' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_271.hdf5' to 'output/bak-snap_271.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 9.39986 sec, total size 5351.55 MB, corresponds to effective I/O rate of 569.323 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 211 (rank 211 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 331 (rank 331 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 219 (rank 219 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 314 (rank 314 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 221 (rank 221 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.