TACC: Starting up job 4153614 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186326.48 Mb (on task= 243), Smallest = 185658.60 Mb (on task= 621), Average = 186014.91 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.88 Mb (on task= 378), Average = 191386.89 Mb Committed_AS: Largest = 5728.29 Mb (on task= 621), Smallest = 5060.41 Mb (on task= 243), Average = 5371.98 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5728.29 Mb (on task= 621), Smallest = 5060.41 Mb (on task= 243), Average = 5371.98 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 92), Smallest = 95257.20 Mb (on task= 368), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c208-001.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.1854 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_271.hdf5' contains: READIC: Type 0 (gas): 65696430 (tot= 65696430) masstab= 0 READIC: Type 1: 68295430 (tot= 68295430) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 110452 (tot= 110452) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_271.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.62692 sec, total size 6389.33 MB, corresponds to effective I/O rate of 1380.9 MB/sec READIC: Total number of particles : 134102312 INIT: Testing ID uniqueness... INIT: success. took=0.0620815 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=30633, determination of top-level tree involved 5 iterations and took 0.485087 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=166 for nextra=75, reaching maximum imbalance of 1.10336|1.1043 DOMAIN: combining multiple-domains took 0.0171108 sec DOMAIN: exchange of 68405882 particles DOMAIN: particle exchange done. (took 0.306928 sec) DOMAIN: domain decomposition done. (took in total 0.816474 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0468235 sec. INIT: Converting u -> entropy All.cf_a3inv=432.081 FOF: Begin to compute FoF group catalogue... (presently allocated=116.28 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.108971 sec =65402.3 NTopnodes=35009 NTopleaves=30633 FOF: Start linking particles (presently allocated=128.647 MB) FOF: linking of small cells took 0.00111416 sec FOF: local links done (took 0.113906 sec, avg-work=0.101567, imbalance=1.11092). FOF: Marked=170366 out of the 68295430 primaries which are linked FOF: begin linking across processors (presently allocated=129.923 MB) FOF: have done 10308 cross links (processed 170366, took 0.00539853 sec) FOF: have done 2445 cross links (processed 80958, took 0.00447495 sec) FOF: have done 388 cross links (processed 10291, took 0.00328147 sec) FOF: have done 65 cross links (processed 1562, took 0.00311217 sec) FOF: have done 7 cross links (processed 294, took 0.00308576 sec) FOF: have done 1 cross links (processed 18, took 0.00381275 sec) FOF: have done 0 cross links (processed 2, took 0.00300575 sec) FOF: Local groups found. FOF: primary group finding took = 0.147417 sec FOF: Start finding nearest dm-particle (presently allocated=128.647 MB) FOF: fof-nearest iteration 1: need to repeat for 63408118 particles. (took = 0.0707645 sec) FOF: fof-nearest iteration 2: need to repeat for 52194555 particles. (took = 0.0809323 sec) FOF: fof-nearest iteration 3: need to repeat for 27972789 particles. (took = 0.0871024 sec) FOF: fof-nearest iteration 4: need to repeat for 8904486 particles. (took = 0.0584749 sec) FOF: fof-nearest iteration 5: need to repeat for 1159220 particles. (took = 0.0239537 sec) FOF: fof-nearest iteration 6: need to repeat for 33795 particles. (took = 0.00607836 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.333057 sec FOF: compiling local group data and catalogue took = 0.0166035 sec FOF: Total number of FOF groups with at least 32 particles: 640541 FOF: Largest FOF group has 211 particles. FOF: Total number of particles in FOF groups: 134102312 FOF: group properties are now allocated.. (presently allocated=119.927 MB) FOF: computation of group properties took = 0.00627601 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.159092 sec FOF: Finished computing FoF groups. Complete work took 0.858457 sec (presently allocated=116.642 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.33 MB) GRAVTREE: Tree construction done. took 0.349638 sec =84488.2 NTopnodes=35009 NTopleaves=30633 tree-build-scalability=0.586274 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 134098117 particles. (took 0.674244 sec) SUBFIND: ngb iteration 2: need to repeat for 134094885 particles. (took 0.573164 sec) SUBFIND: ngb iteration 3: need to repeat for 134093328 particles. (took 0.526227 sec) SUBFIND: ngb iteration 4: need to repeat for 134091237 particles. (took 0.500832 sec) SUBFIND: ngb iteration 5: need to repeat for 134089967 particles. (took 0.492322 sec) SUBFIND: ngb iteration 6: need to repeat for 134088731 particles. (took 0.498889 sec) SUBFIND: ngb iteration 7: need to repeat for 134087281 particles. (took 0.511629 sec) SUBFIND: ngb iteration 8: need to repeat for 134086100 particles. (took 0.53457 sec) SUBFIND: ngb iteration 9: need to repeat for 134085049 particles. (took 0.563108 sec) SUBFIND: ngb iteration 10: need to repeat for 134039116 particles. (took 0.594951 sec) SUBFIND: ngb iteration 11: need to repeat for 132221628 particles. (took 0.630041 sec) SUBFIND: ngb iteration 12: need to repeat for 124452491 particles. (took 0.65467 sec) SUBFIND: ngb iteration 13: need to repeat for 114142758 particles. (took 0.64337 sec) SUBFIND: ngb iteration 14: need to repeat for 102225769 particles. (took 0.617237 sec) SUBFIND: ngb iteration 15: need to repeat for 91373871 particles. (took 0.579327 sec) SUBFIND: ngb iteration 16: need to repeat for 82305322 particles. (took 0.540331 sec) SUBFIND: ngb iteration 17: need to repeat for 73983854 particles. (took 0.503577 sec) SUBFIND: ngb iteration 18: need to repeat for 65327876 particles. (took 0.462822 sec) SUBFIND: ngb iteration 19: need to repeat for 55160283 particles. (took 0.422504 sec) SUBFIND: ngb iteration 20: need to repeat for 42677666 particles. (took 0.371658 sec) SUBFIND: ngb iteration 21: need to repeat for 28924220 particles. (took 0.308761 sec) SUBFIND: ngb iteration 22: need to repeat for 16216579 particles. (took 0.226963 sec) SUBFIND: ngb iteration 23: need to repeat for 7123526 particles. (took 0.144546 sec) SUBFIND: ngb iteration 24: need to repeat for 2266149 particles. (took 0.0759773 sec) SUBFIND: ngb iteration 25: need to repeat for 486636 particles. (took 0.0308963 sec) SUBFIND: ngb iteration 26: need to repeat for 74770 particles. (took 0.00902476 sec) SUBFIND: ngb iteration 27: need to repeat for 17615 particles. (took 0.00231391 sec) SUBFIND: ngb iteration 28: need to repeat for 12639 particles. (took 0.00110883 sec) SUBFIND: ngb iteration 29: need to repeat for 12124 particles. (took 0.00126571 sec) SUBFIND: ngb iteration 30: need to repeat for 11861 particles. (took 0.00167724 sec) SUBFIND: ngb iteration 31: need to repeat for 11436 particles. (took 0.00182228 sec) SUBFIND: ngb iteration 32: need to repeat for 10939 particles. (took 0.00183754 sec) SUBFIND: ngb iteration 33: need to repeat for 9531 particles. (took 0.00329461 sec) SUBFIND: ngb iteration 34: need to repeat for 8269 particles. (took 0.00283234 sec) SUBFIND: ngb iteration 35: need to repeat for 6564 particles. (took 0.00189059 sec) SUBFIND: ngb iteration 36: need to repeat for 5268 particles. (took 0.00235775 sec) SUBFIND: ngb iteration 37: need to repeat for 4064 particles. (took 0.00132506 sec) SUBFIND: ngb iteration 38: need to repeat for 2835 particles. (took 0.00151077 sec) SUBFIND: ngb iteration 39: need to repeat for 1918 particles. (took 0.00104549 sec) SUBFIND: ngb iteration 40: need to repeat for 1181 particles. (took 0.00100099 sec) SUBFIND: ngb iteration 41: need to repeat for 600 particles. (took 0.00103073 sec) SUBFIND: ngb iteration 42: need to repeat for 178 particles. (took 0.000917785 sec) SUBFIND: ngb iteration 43: need to repeat for 78 particles. (took 0.000721851 sec) SUBFIND: ngb iteration 44: need to repeat for 21 particles. (took 0.000555651 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 11.7248 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134102312 particles, for threshold size factor 0.6) SUBFIND: The other 640541 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00278028 sec SUBFIND: particle balance=1.10336 SUBFIND: subfind_exchange() took 0.371521 sec SUBFIND: particle balance for processing=1.00052 SUBFIND: subdomain decomposition took 0.0697122 sec SUBFIND: serial subfind subdomain decomposition took 0.0687728 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=989 took 16.1597 sec SUBFIND: root-task=0: Serial processing of halo 0 took 16.3293 SUBFIND: Processing overall took (total time=16.4759 sec) SUBFIND: 0 out of 32584 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344916 ALLOCATE: Changing to MaxPartSph = 168973 SUBFIND: subfind_exchange() (for return to original CPU) took 0.408062 sec TREE: Full tree construction for all particles. (presently allocated=107.699 MB) GRAVTREE: Tree construction done. took 0.959278 sec =84488.2 NTopnodes=35009 NTopleaves=30633 tree-build-scalability=0.586274 SUBFIND: SO iteration 1: need to repeat for 640541 halo centers. (took 0.0179699 sec) SUBFIND: SO iteration 2: need to repeat for 640541 halo centers. (took 0.0167508 sec) SUBFIND: SO iteration 3: need to repeat for 640541 halo centers. (took 0.0162414 sec) SUBFIND: SO iteration 4: need to repeat for 640541 halo centers. (took 0.0159508 sec) SUBFIND: SO iteration 5: need to repeat for 640541 halo centers. (took 0.0158763 sec) SUBFIND: SO iteration 6: need to repeat for 640541 halo centers. (took 0.0160764 sec) SUBFIND: SO iteration 7: need to repeat for 640541 halo centers. (took 0.0158235 sec) SUBFIND: SO iteration 8: need to repeat for 640541 halo centers. (took 0.0156666 sec) SUBFIND: SO iteration 9: need to repeat for 640541 halo centers. (took 0.0156524 sec) SUBFIND: SO iteration 10: need to repeat for 640541 halo centers. (took 0.0155696 sec) SUBFIND: SO iteration 11: need to repeat for 640541 halo centers. (took 0.0159245 sec) SUBFIND: SO iteration 12: need to repeat for 640541 halo centers. (took 0.0155656 sec) SUBFIND: SO iteration 13: need to repeat for 640541 halo centers. (took 0.0156031 sec) SUBFIND: SO iteration 14: need to repeat for 640541 halo centers. (took 0.0158488 sec) SUBFIND: SO iteration 15: need to repeat for 640541 halo centers. (took 0.015643 sec) SUBFIND: SO iteration 16: need to repeat for 9395 halo centers. (took 0.0154597 sec) SUBFIND: SO iteration 17: need to repeat for 92 halo centers. (took 0.00121633 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000183474 sec) SUBFIND: SO iteration 1: need to repeat for 640541 halo centers. (took 0.0156129 sec) SUBFIND: SO iteration 2: need to repeat for 640541 halo centers. (took 0.0152016 sec) SUBFIND: SO iteration 3: need to repeat for 640541 halo centers. (took 0.015413 sec) SUBFIND: SO iteration 4: need to repeat for 640541 halo centers. (took 0.0154865 sec) SUBFIND: SO iteration 5: need to repeat for 640541 halo centers. (took 0.0154439 sec) SUBFIND: SO iteration 6: need to repeat for 640541 halo centers. (took 0.0155316 sec) SUBFIND: SO iteration 7: need to repeat for 640541 halo centers. (took 0.0155029 sec) SUBFIND: SO iteration 8: need to repeat for 640541 halo centers. (took 0.0155132 sec) SUBFIND: SO iteration 9: need to repeat for 640541 halo centers. (took 0.015499 sec) SUBFIND: SO iteration 10: need to repeat for 640541 halo centers. (took 0.015549 sec) SUBFIND: SO iteration 11: need to repeat for 640541 halo centers. (took 0.0155508 sec) SUBFIND: SO iteration 12: need to repeat for 640541 halo centers. (took 0.0154676 sec) SUBFIND: SO iteration 13: need to repeat for 640541 halo centers. (took 0.0157453 sec) SUBFIND: SO iteration 14: need to repeat for 640541 halo centers. (took 0.0155283 sec) SUBFIND: SO iteration 15: need to repeat for 640541 halo centers. (took 0.0159083 sec) SUBFIND: SO iteration 16: need to repeat for 4742 halo centers. (took 0.0153491 sec) SUBFIND: SO iteration 17: need to repeat for 42 halo centers. (took 0.00073114 sec) SUBFIND: SO iteration 1: need to repeat for 640541 halo centers. (took 0.0155467 sec) SUBFIND: SO iteration 2: need to repeat for 640541 halo centers. (took 0.0164752 sec) SUBFIND: SO iteration 3: need to repeat for 640541 halo centers. (took 0.0159423 sec) SUBFIND: SO iteration 4: need to repeat for 640541 halo centers. (took 0.0157201 sec) SUBFIND: SO iteration 5: need to repeat for 640541 halo centers. (took 0.0156375 sec) SUBFIND: SO iteration 6: need to repeat for 640541 halo centers. (took 0.0155114 sec) SUBFIND: SO iteration 7: need to repeat for 640541 halo centers. (took 0.0156076 sec) SUBFIND: SO iteration 8: need to repeat for 640541 halo centers. (took 0.0155319 sec) SUBFIND: SO iteration 9: need to repeat for 640541 halo centers. (took 0.0156006 sec) SUBFIND: SO iteration 10: need to repeat for 640541 halo centers. (took 0.0157375 sec) SUBFIND: SO iteration 11: need to repeat for 640541 halo centers. (took 0.0155597 sec) SUBFIND: SO iteration 12: need to repeat for 640541 halo centers. (took 0.0155988 sec) SUBFIND: SO iteration 13: need to repeat for 640541 halo centers. (took 0.0155709 sec) SUBFIND: SO iteration 14: need to repeat for 640541 halo centers. (took 0.0155587 sec) SUBFIND: SO iteration 15: need to repeat for 640541 halo centers. (took 0.0155308 sec) SUBFIND: SO iteration 16: need to repeat for 9690 halo centers. (took 0.0153906 sec) SUBFIND: SO iteration 17: need to repeat for 98 halo centers. (took 0.00122833 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000192799 sec) SUBFIND: SO iteration 1: need to repeat for 640541 halo centers. (took 0.0155841 sec) SUBFIND: SO iteration 2: need to repeat for 640541 halo centers. (took 0.0162791 sec) SUBFIND: SO iteration 3: need to repeat for 640541 halo centers. (took 0.0157514 sec) SUBFIND: SO iteration 4: need to repeat for 640541 halo centers. (took 0.0162414 sec) SUBFIND: SO iteration 5: need to repeat for 640541 halo centers. (took 0.016119 sec) SUBFIND: SO iteration 6: need to repeat for 640541 halo centers. (took 0.016106 sec) SUBFIND: SO iteration 7: need to repeat for 640541 halo centers. (took 0.0162996 sec) SUBFIND: SO iteration 8: need to repeat for 640541 halo centers. (took 0.016258 sec) SUBFIND: SO iteration 9: need to repeat for 640541 halo centers. (took 0.0166226 sec) SUBFIND: SO iteration 10: need to repeat for 640541 halo centers. (took 0.0169314 sec) SUBFIND: SO iteration 11: need to repeat for 640541 halo centers. (took 0.017967 sec) SUBFIND: SO iteration 12: need to repeat for 640541 halo centers. (took 0.0177894 sec) SUBFIND: SO iteration 13: need to repeat for 640541 halo centers. (took 0.0174332 sec) SUBFIND: SO iteration 14: need to repeat for 640541 halo centers. (took 0.0173281 sec) SUBFIND: SO iteration 15: need to repeat for 640541 halo centers. (took 0.0174135 sec) SUBFIND: SO iteration 16: need to repeat for 329656 halo centers. (took 0.0170649 sec) SUBFIND: SO iteration 17: need to repeat for 10684 halo centers. (took 0.0127036 sec) SUBFIND: SO iteration 18: need to repeat for 252 halo centers. (took 0.00139103 sec) SUBFIND: determining spherical overdensity masses took 1.04222 sec SUBFIND: assembled and ordered groups and subhalos (took 0.183833 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_271' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.81886 sec, total size 246.145 MB, corresponds to effective I/O rate of 87.3206 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.81984 sec SUBFIND: Finished with SUBFIND. (total time=34.4074 sec) SUBFIND: Total number of subhalos with at least 20 particles: 672991 SUBFIND: Largest subhalo has 211 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134102312 FOF: preparing output order of particles took 1.26289 sec SNAPSHOT: writing snapshot file #271 @ time 0.132275 ... SNAPSHOT: writing snapshot file: 'output/snap_271' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_271.hdf5' to 'output/bak-snap_271.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.37359 sec, total size 5355.87 MB, corresponds to effective I/O rate of 639.615 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 268 (rank 268 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 269 (rank 269 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 272 (rank 272 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 278 (rank 278 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 258 (rank 258 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 263 (rank 263 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 265 (rank 265 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.