TACC: Starting up job 4242146 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186446.61 Mb (on task= 108), Smallest = 186412.97 Mb (on task= 0), Average = 186433.46 Mb Total Mem: Largest = 191515.35 Mb (on task= 297), Smallest = 191515.33 Mb (on task= 27), Average = 191515.34 Mb Committed_AS: Largest = 5102.36 Mb (on task= 0), Smallest = 5068.73 Mb (on task= 108), Average = 5081.87 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5102.36 Mb (on task= 0), Smallest = 5068.73 Mb (on task= 108), Average = 5081.87 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 297), Smallest = 95321.47 Mb (on task= 50), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c152-032.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.3033 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 58381977 (tot= 58381977) masstab= 0 READIC: Type 1: 75614778 (tot= 75614778) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 705 (tot= 705) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 7.10246 sec, total size 6356.63 MB, corresponds to effective I/O rate of 894.99 MB/sec READIC: Total number of particles : 133997460 INIT: Testing ID uniqueness... INIT: success. took=0.0785401 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=20476, determination of top-level tree involved 5 iterations and took 0.688931 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=158 for nextra=62, reaching maximum imbalance of 1.09665|1.09682 DOMAIN: combining multiple-domains took 0.0144707 sec DOMAIN: exchange of 75615483 particles DOMAIN: particle exchange done. (took 0.338126 sec) DOMAIN: domain decomposition done. (took in total 1.05199 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0691517 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=168.405 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0914479 sec =107975 NTopnodes=23401 NTopleaves=20476 FOF: Start linking particles (presently allocated=191.61 MB) FOF: linking of small cells took 0.00205289 sec FOF: local links done (took 0.147573 sec, avg-work=0.132794, imbalance=1.10352). FOF: Marked=274038 out of the 75614778 primaries which are linked FOF: begin linking across processors (presently allocated=193.537 MB) FOF: have done 17954 cross links (processed 274038, took 0.0228117 sec) FOF: have done 3302 cross links (processed 80543, took 0.0055006 sec) FOF: have done 457 cross links (processed 10882, took 0.00482697 sec) FOF: have done 56 cross links (processed 1465, took 0.00443857 sec) FOF: have done 5 cross links (processed 175, took 0.00444617 sec) FOF: have done 0 cross links (processed 13, took 0.0044607 sec) FOF: Local groups found. FOF: primary group finding took = 0.205459 sec FOF: Start finding nearest dm-particle (presently allocated=191.61 MB) FOF: fof-nearest iteration 1: need to repeat for 57551999 particles. (took = 0.0830318 sec) FOF: fof-nearest iteration 2: need to repeat for 53465055 particles. (took = 0.0884694 sec) FOF: fof-nearest iteration 3: need to repeat for 41051128 particles. (took = 0.0952287 sec) FOF: fof-nearest iteration 4: need to repeat for 21335464 particles. (took = 0.0866287 sec) FOF: fof-nearest iteration 5: need to repeat for 4639716 particles. (took = 0.055947 sec) FOF: fof-nearest iteration 6: need to repeat for 130024 particles. (took = 0.0179973 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.435638 sec FOF: compiling local group data and catalogue took = 0.0282594 sec FOF: Total number of FOF groups with at least 32 particles: 3116218 FOF: Largest FOF group has 86 particles. FOF: Total number of particles in FOF groups: 133997460 FOF: group properties are now allocated.. (presently allocated=175.91 MB) FOF: computation of group properties took = 0.0169955 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.128853 sec FOF: Finished computing FoF groups. Complete work took 0.981182 sec (presently allocated=170.987 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=181.12 MB) GRAVTREE: Tree construction done. took 0.397161 sec =138514 NTopnodes=23401 NTopleaves=20476 tree-build-scalability=0.831448 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 132840250 particles. (took 0.860061 sec) SUBFIND: ngb iteration 2: need to repeat for 131076454 particles. (took 0.711915 sec) SUBFIND: ngb iteration 3: need to repeat for 128860929 particles. (took 0.649703 sec) SUBFIND: ngb iteration 4: need to repeat for 126091726 particles. (took 0.604118 sec) SUBFIND: ngb iteration 5: need to repeat for 122130068 particles. (took 0.58177 sec) SUBFIND: ngb iteration 6: need to repeat for 115414589 particles. (took 0.567819 sec) SUBFIND: ngb iteration 7: need to repeat for 103598785 particles. (took 0.538418 sec) SUBFIND: ngb iteration 8: need to repeat for 86907162 particles. (took 0.468601 sec) SUBFIND: ngb iteration 9: need to repeat for 71874542 particles. (took 0.36238 sec) SUBFIND: ngb iteration 10: need to repeat for 63403028 particles. (took 0.265279 sec) SUBFIND: ngb iteration 11: need to repeat for 59963142 particles. (took 0.213374 sec) SUBFIND: ngb iteration 12: need to repeat for 58844266 particles. (took 0.196254 sec) SUBFIND: ngb iteration 13: need to repeat for 58520289 particles. (took 0.193164 sec) SUBFIND: ngb iteration 14: need to repeat for 58426523 particles. (took 0.192539 sec) SUBFIND: ngb iteration 15: need to repeat for 58396582 particles. (took 0.188824 sec) SUBFIND: ngb iteration 16: need to repeat for 58386572 particles. (took 0.18166 sec) SUBFIND: ngb iteration 17: need to repeat for 58382769 particles. (took 0.171156 sec) SUBFIND: ngb iteration 18: need to repeat for 58380598 particles. (took 0.159686 sec) SUBFIND: ngb iteration 19: need to repeat for 58377902 particles. (took 0.148724 sec) SUBFIND: ngb iteration 20: need to repeat for 58373145 particles. (took 0.143944 sec) SUBFIND: ngb iteration 21: need to repeat for 58364140 particles. (took 0.144194 sec) SUBFIND: ngb iteration 22: need to repeat for 58345598 particles. (took 0.146894 sec) SUBFIND: ngb iteration 23: need to repeat for 58307744 particles. (took 0.150896 sec) SUBFIND: ngb iteration 24: need to repeat for 58227763 particles. (took 0.15651 sec) SUBFIND: ngb iteration 25: need to repeat for 58061183 particles. (took 0.165127 sec) SUBFIND: ngb iteration 26: need to repeat for 57731100 particles. (took 0.177985 sec) SUBFIND: ngb iteration 27: need to repeat for 57113042 particles. (took 0.194952 sec) SUBFIND: ngb iteration 28: need to repeat for 56032893 particles. (took 0.217538 sec) SUBFIND: ngb iteration 29: need to repeat for 54371607 particles. (took 0.250697 sec) SUBFIND: ngb iteration 30: need to repeat for 52075993 particles. (took 0.292144 sec) SUBFIND: ngb iteration 31: need to repeat for 49151793 particles. (took 0.330393 sec) SUBFIND: ngb iteration 32: need to repeat for 45518766 particles. (took 0.355674 sec) SUBFIND: ngb iteration 33: need to repeat for 40990806 particles. (took 0.358003 sec) SUBFIND: ngb iteration 34: need to repeat for 35463093 particles. (took 0.335845 sec) SUBFIND: ngb iteration 35: need to repeat for 29030128 particles. (took 0.298172 sec) SUBFIND: ngb iteration 36: need to repeat for 22120082 particles. (took 0.25166 sec) SUBFIND: ngb iteration 37: need to repeat for 15382301 particles. (took 0.203347 sec) SUBFIND: ngb iteration 38: need to repeat for 9556780 particles. (took 0.156038 sec) SUBFIND: ngb iteration 39: need to repeat for 5182720 particles. (took 0.110661 sec) SUBFIND: ngb iteration 40: need to repeat for 2377018 particles. (took 0.0719123 sec) SUBFIND: ngb iteration 41: need to repeat for 896662 particles. (took 0.0415185 sec) SUBFIND: ngb iteration 42: need to repeat for 267167 particles. (took 0.02006 sec) SUBFIND: ngb iteration 43: need to repeat for 60908 particles. (took 0.00843607 sec) SUBFIND: ngb iteration 44: need to repeat for 10416 particles. (took 0.0031261 sec) SUBFIND: ngb iteration 45: need to repeat for 1208 particles. (took 0.000914963 sec) SUBFIND: ngb iteration 46: need to repeat for 95 particles. (took 0.000326226 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 11.8483 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997460 particles, for threshold size factor 0.6) SUBFIND: The other 3116218 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00873743 sec SUBFIND: particle balance=1.09665 SUBFIND: subfind_exchange() took 0.44766 sec SUBFIND: particle balance for processing=1.00021 SUBFIND: subdomain decomposition took 0.104771 sec SUBFIND: serial subfind subdomain decomposition took 0.103507 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=7214 took 171.867 sec SUBFIND: root-task=0: Serial processing of halo 0 took 172.121 SUBFIND: Processing overall took (total time=173.978 sec) SUBFIND: 0 out of 151 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 225240 SUBFIND: subfind_exchange() (for return to original CPU) took 0.504023 sec TREE: Full tree construction for all particles. (presently allocated=156.987 MB) GRAVTREE: Tree construction done. took 1.42858 sec =138514 NTopnodes=23401 NTopleaves=20476 tree-build-scalability=0.831448 SUBFIND: SO iteration 1: need to repeat for 3115681 halo centers. (took 0.0396119 sec) SUBFIND: SO iteration 2: need to repeat for 3115681 halo centers. (took 0.0324557 sec) SUBFIND: SO iteration 3: need to repeat for 3115681 halo centers. (took 0.0340261 sec) SUBFIND: SO iteration 4: need to repeat for 3115681 halo centers. (took 0.0356862 sec) SUBFIND: SO iteration 5: need to repeat for 3115681 halo centers. (took 0.0355341 sec) SUBFIND: SO iteration 6: need to repeat for 3115681 halo centers. (took 0.0345002 sec) SUBFIND: SO iteration 7: need to repeat for 3115681 halo centers. (took 0.036032 sec) SUBFIND: SO iteration 8: need to repeat for 3115681 halo centers. (took 0.035525 sec) SUBFIND: SO iteration 9: need to repeat for 3115681 halo centers. (took 0.0338504 sec) SUBFIND: SO iteration 10: need to repeat for 3115681 halo centers. (took 0.0335359 sec) SUBFIND: SO iteration 11: need to repeat for 3115681 halo centers. (took 0.0369255 sec) SUBFIND: SO iteration 12: need to repeat for 3115681 halo centers. (took 0.035209 sec) SUBFIND: SO iteration 13: need to repeat for 3115681 halo centers. (took 0.033751 sec) SUBFIND: SO iteration 14: need to repeat for 3115681 halo centers. (took 0.03535 sec) SUBFIND: SO iteration 15: need to repeat for 3115681 halo centers. (took 0.0340391 sec) SUBFIND: SO iteration 16: need to repeat for 419102 halo centers. (took 0.0316374 sec) SUBFIND: SO iteration 17: need to repeat for 7101 halo centers. (took 0.00894297 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000978701 sec) SUBFIND: SO iteration 1: need to repeat for 3115681 halo centers. (took 0.0362445 sec) SUBFIND: SO iteration 2: need to repeat for 3115681 halo centers. (took 0.0327375 sec) SUBFIND: SO iteration 3: need to repeat for 3115681 halo centers. (took 0.0329187 sec) SUBFIND: SO iteration 4: need to repeat for 3115681 halo centers. (took 0.0339909 sec) SUBFIND: SO iteration 5: need to repeat for 3115681 halo centers. (took 0.0328506 sec) SUBFIND: SO iteration 6: need to repeat for 3115681 halo centers. (took 0.0330701 sec) SUBFIND: SO iteration 7: need to repeat for 3115681 halo centers. (took 0.0328373 sec) SUBFIND: SO iteration 8: need to repeat for 3115681 halo centers. (took 0.0334161 sec) SUBFIND: SO iteration 9: need to repeat for 3115681 halo centers. (took 0.0328752 sec) SUBFIND: SO iteration 10: need to repeat for 3115681 halo centers. (took 0.0328126 sec) SUBFIND: SO iteration 11: need to repeat for 3115681 halo centers. (took 0.0340226 sec) SUBFIND: SO iteration 12: need to repeat for 3115681 halo centers. (took 0.0328131 sec) SUBFIND: SO iteration 13: need to repeat for 3115681 halo centers. (took 0.0330163 sec) SUBFIND: SO iteration 14: need to repeat for 3115681 halo centers. (took 0.033364 sec) SUBFIND: SO iteration 15: need to repeat for 3115681 halo centers. (took 0.0328481 sec) SUBFIND: SO iteration 16: need to repeat for 254626 halo centers. (took 0.0316144 sec) SUBFIND: SO iteration 17: need to repeat for 4444 halo centers. (took 0.00708367 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000691419 sec) SUBFIND: SO iteration 1: need to repeat for 3115681 halo centers. (took 0.0332675 sec) SUBFIND: SO iteration 2: need to repeat for 3115681 halo centers. (took 0.0322778 sec) SUBFIND: SO iteration 3: need to repeat for 3115681 halo centers. (took 0.0329583 sec) SUBFIND: SO iteration 4: need to repeat for 3115681 halo centers. (took 0.0329214 sec) SUBFIND: SO iteration 5: need to repeat for 3115681 halo centers. (took 0.0328217 sec) SUBFIND: SO iteration 6: need to repeat for 3115681 halo centers. (took 0.0329872 sec) SUBFIND: SO iteration 7: need to repeat for 3115681 halo centers. (took 0.0340368 sec) SUBFIND: SO iteration 8: need to repeat for 3115681 halo centers. (took 0.0329421 sec) SUBFIND: SO iteration 9: need to repeat for 3115681 halo centers. (took 0.0336189 sec) SUBFIND: SO iteration 10: need to repeat for 3115681 halo centers. (took 0.0326779 sec) SUBFIND: SO iteration 11: need to repeat for 3115681 halo centers. (took 0.0327056 sec) SUBFIND: SO iteration 12: need to repeat for 3115681 halo centers. (took 0.0327039 sec) SUBFIND: SO iteration 13: need to repeat for 3115681 halo centers. (took 0.0327103 sec) SUBFIND: SO iteration 14: need to repeat for 3115681 halo centers. (took 0.0326861 sec) SUBFIND: SO iteration 15: need to repeat for 3115681 halo centers. (took 0.0326794 sec) SUBFIND: SO iteration 16: need to repeat for 427363 halo centers. (took 0.0333252 sec) SUBFIND: SO iteration 17: need to repeat for 7459 halo centers. (took 0.00882796 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.00111498 sec) SUBFIND: SO iteration 1: need to repeat for 3115681 halo centers. (took 0.0343288 sec) SUBFIND: SO iteration 2: need to repeat for 3115681 halo centers. (took 0.0336369 sec) SUBFIND: SO iteration 3: need to repeat for 3115681 halo centers. (took 0.0317788 sec) SUBFIND: SO iteration 4: need to repeat for 3115681 halo centers. (took 0.0326123 sec) SUBFIND: SO iteration 5: need to repeat for 3115681 halo centers. (took 0.0328628 sec) SUBFIND: SO iteration 6: need to repeat for 3115681 halo centers. (took 0.0358826 sec) SUBFIND: SO iteration 7: need to repeat for 3115681 halo centers. (took 0.0326122 sec) SUBFIND: SO iteration 8: need to repeat for 3115681 halo centers. (took 0.0327399 sec) SUBFIND: SO iteration 9: need to repeat for 3115681 halo centers. (took 0.0321625 sec) SUBFIND: SO iteration 10: need to repeat for 3115681 halo centers. (took 0.0324735 sec) SUBFIND: SO iteration 11: need to repeat for 3115681 halo centers. (took 0.0318023 sec) SUBFIND: SO iteration 12: need to repeat for 3115681 halo centers. (took 0.0315661 sec) SUBFIND: SO iteration 13: need to repeat for 3115681 halo centers. (took 0.0319007 sec) SUBFIND: SO iteration 14: need to repeat for 3115681 halo centers. (took 0.0317501 sec) SUBFIND: SO iteration 15: need to repeat for 3115681 halo centers. (took 0.0321232 sec) SUBFIND: SO iteration 16: need to repeat for 2839765 halo centers. (took 0.031485 sec) SUBFIND: SO iteration 17: need to repeat for 249411 halo centers. (took 0.031704 sec) SUBFIND: SO iteration 18: need to repeat for 41613 halo centers. (took 0.0111752 sec) SUBFIND: determining spherical overdensity masses took 2.2216 sec SUBFIND: assembled and ordered groups and subhalos (took 0.129082 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.91419 sec, total size 1164.89 MB, corresponds to effective I/O rate of 608.555 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.9168 sec SUBFIND: Finished with SUBFIND. (total time=192.964 sec) SUBFIND: Total number of subhalos with at least 20 particles: 3115832 SUBFIND: Largest subhalo has 86 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133972813 FOF: preparing output order of particles took 1.40595 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.35927 sec, total size 5268.57 MB, corresponds to effective I/O rate of 715.908 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 201 (rank 201 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 203 (rank 203 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 206 (rank 206 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 222 (rank 222 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.