TACC: Starting up job 4242146 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186454.68 Mb (on task= 297), Smallest = 186399.86 Mb (on task= 0), Average = 186434.06 Mb Total Mem: Largest = 191515.35 Mb (on task= 297), Smallest = 191515.33 Mb (on task= 27), Average = 191515.34 Mb Committed_AS: Largest = 5115.47 Mb (on task= 0), Smallest = 5060.66 Mb (on task= 297), Average = 5081.27 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5115.47 Mb (on task= 0), Smallest = 5060.66 Mb (on task= 297), Average = 5081.27 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 297), Smallest = 95321.46 Mb (on task= 407), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c152-032.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.4465 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 58611061 (tot= 58611061) masstab= 0 READIC: Type 1: 75385744 (tot= 75385744) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 690 (tot= 690) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 8.53453 sec, total size 6357.5 MB, corresponds to effective I/O rate of 744.915 MB/sec READIC: Total number of particles : 133997495 INIT: Testing ID uniqueness... INIT: success. took=0.0770227 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=21855, determination of top-level tree involved 5 iterations and took 0.682819 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=158 for nextra=62, reaching maximum imbalance of 1.09679|1.09682 DOMAIN: combining multiple-domains took 0.014267 sec DOMAIN: exchange of 75386434 particles DOMAIN: particle exchange done. (took 0.344957 sec) DOMAIN: domain decomposition done. (took in total 1.05274 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0675982 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=168.599 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.096076 sec =107657 NTopnodes=24977 NTopleaves=21855 FOF: Start linking particles (presently allocated=191.849 MB) FOF: linking of small cells took 0.00188012 sec FOF: local links done (took 0.147709 sec, avg-work=0.133207, imbalance=1.10263). FOF: Marked=160640 out of the 75385744 primaries which are linked FOF: begin linking across processors (presently allocated=193.777 MB) FOF: have done 16875 cross links (processed 160640, took 0.0064949 sec) FOF: have done 3258 cross links (processed 77513, took 0.00554706 sec) FOF: have done 523 cross links (processed 10781, took 0.00487634 sec) FOF: have done 85 cross links (processed 1704, took 0.004579 sec) FOF: have done 13 cross links (processed 232, took 0.00438435 sec) FOF: have done 0 cross links (processed 28, took 0.00440557 sec) FOF: Local groups found. FOF: primary group finding took = 0.18975 sec FOF: Start finding nearest dm-particle (presently allocated=191.849 MB) FOF: fof-nearest iteration 1: need to repeat for 57759870 particles. (took = 0.0830435 sec) FOF: fof-nearest iteration 2: need to repeat for 53575335 particles. (took = 0.0894162 sec) FOF: fof-nearest iteration 3: need to repeat for 40918377 particles. (took = 0.0957641 sec) FOF: fof-nearest iteration 4: need to repeat for 20997908 particles. (took = 0.0874307 sec) FOF: fof-nearest iteration 5: need to repeat for 4441139 particles. (took = 0.055397 sec) FOF: fof-nearest iteration 6: need to repeat for 121893 particles. (took = 0.0172617 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.436486 sec FOF: compiling local group data and catalogue took = 0.0277659 sec FOF: Total number of FOF groups with at least 32 particles: 2940627 FOF: Largest FOF group has 46 particles. FOF: Total number of particles in FOF groups: 133997495 FOF: group properties are now allocated.. (presently allocated=175.981 MB) FOF: computation of group properties took = 0.0163165 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.1281 sec FOF: Finished computing FoF groups. Complete work took 0.970186 sec (presently allocated=171.044 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=181.176 MB) GRAVTREE: Tree construction done. took 0.417938 sec =138062 NTopnodes=24977 NTopleaves=21855 tree-build-scalability=0.819507 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133478229 particles. (took 0.81119 sec) SUBFIND: ngb iteration 2: need to repeat for 132614600 particles. (took 0.697714 sec) SUBFIND: ngb iteration 3: need to repeat for 131350654 particles. (took 0.654695 sec) SUBFIND: ngb iteration 4: need to repeat for 129406063 particles. (took 0.627737 sec) SUBFIND: ngb iteration 5: need to repeat for 126047881 particles. (took 0.611719 sec) SUBFIND: ngb iteration 6: need to repeat for 119792345 particles. (took 0.597361 sec) SUBFIND: ngb iteration 7: need to repeat for 108175134 particles. (took 0.571627 sec) SUBFIND: ngb iteration 8: need to repeat for 90809150 particles. (took 0.50286 sec) SUBFIND: ngb iteration 9: need to repeat for 74237855 particles. (took 0.392681 sec) SUBFIND: ngb iteration 10: need to repeat for 64530656 particles. (took 0.285012 sec) SUBFIND: ngb iteration 11: need to repeat for 60476155 particles. (took 0.223225 sec) SUBFIND: ngb iteration 12: need to repeat for 59136892 particles. (took 0.201541 sec) SUBFIND: ngb iteration 13: need to repeat for 58753263 particles. (took 0.19838 sec) SUBFIND: ngb iteration 14: need to repeat for 58650845 particles. (took 0.198306 sec) SUBFIND: ngb iteration 15: need to repeat for 58622452 particles. (took 0.195035 sec) SUBFIND: ngb iteration 16: need to repeat for 58614216 particles. (took 0.187483 sec) SUBFIND: ngb iteration 17: need to repeat for 58611567 particles. (took 0.176281 sec) SUBFIND: ngb iteration 18: need to repeat for 58609862 particles. (took 0.162989 sec) SUBFIND: ngb iteration 19: need to repeat for 58607672 particles. (took 0.151978 sec) SUBFIND: ngb iteration 20: need to repeat for 58603650 particles. (took 0.14583 sec) SUBFIND: ngb iteration 21: need to repeat for 58596588 particles. (took 0.145041 sec) SUBFIND: ngb iteration 22: need to repeat for 58582378 particles. (took 0.147698 sec) SUBFIND: ngb iteration 23: need to repeat for 58554598 particles. (took 0.151378 sec) SUBFIND: ngb iteration 24: need to repeat for 58498890 particles. (took 0.156762 sec) SUBFIND: ngb iteration 25: need to repeat for 58389360 particles. (took 0.164351 sec) SUBFIND: ngb iteration 26: need to repeat for 58177176 particles. (took 0.175268 sec) SUBFIND: ngb iteration 27: need to repeat for 57785528 particles. (took 0.191775 sec) SUBFIND: ngb iteration 28: need to repeat for 57105084 particles. (took 0.215592 sec) SUBFIND: ngb iteration 29: need to repeat for 56022881 particles. (took 0.250823 sec) SUBFIND: ngb iteration 30: need to repeat for 54437217 particles. (took 0.293949 sec) SUBFIND: ngb iteration 31: need to repeat for 52225969 particles. (took 0.337808 sec) SUBFIND: ngb iteration 32: need to repeat for 49197017 particles. (took 0.371743 sec) SUBFIND: ngb iteration 33: need to repeat for 45109479 particles. (took 0.382294 sec) SUBFIND: ngb iteration 34: need to repeat for 39818266 particles. (took 0.362178 sec) SUBFIND: ngb iteration 35: need to repeat for 33368040 particles. (took 0.324845 sec) SUBFIND: ngb iteration 36: need to repeat for 26103204 particles. (took 0.278001 sec) SUBFIND: ngb iteration 37: need to repeat for 18704626 particles. (took 0.226302 sec) SUBFIND: ngb iteration 38: need to repeat for 12014376 particles. (took 0.173179 sec) SUBFIND: ngb iteration 39: need to repeat for 6751188 particles. (took 0.121737 sec) SUBFIND: ngb iteration 40: need to repeat for 3219653 particles. (took 0.07884 sec) SUBFIND: ngb iteration 41: need to repeat for 1270778 particles. (took 0.0456809 sec) SUBFIND: ngb iteration 42: need to repeat for 399255 particles. (took 0.023356 sec) SUBFIND: ngb iteration 43: need to repeat for 95154 particles. (took 0.0099531 sec) SUBFIND: ngb iteration 44: need to repeat for 16580 particles. (took 0.00380033 sec) SUBFIND: ngb iteration 45: need to repeat for 1806 particles. (took 0.00142344 sec) SUBFIND: ngb iteration 46: need to repeat for 121 particles. (took 0.000430774 sec) SUBFIND: ngb iteration 47: need to repeat for 4 particles. (took 0.000175303 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 12.2352 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997495 particles, for threshold size factor 0.6) SUBFIND: The other 2940627 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00825772 sec SUBFIND: particle balance=1.09652 SUBFIND: subfind_exchange() took 0.448661 sec SUBFIND: particle balance for processing=1.00015 SUBFIND: subdomain decomposition took 0.105193 sec SUBFIND: serial subfind subdomain decomposition took 0.103694 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=6808 took 162.461 sec SUBFIND: root-task=0: Serial processing of halo 0 took 162.716 SUBFIND: Processing overall took (total time=164.084 sec) SUBFIND: 0 out of 469 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 226123 SUBFIND: subfind_exchange() (for return to original CPU) took 0.500491 sec TREE: Full tree construction for all particles. (presently allocated=157.175 MB) GRAVTREE: Tree construction done. took 1.46975 sec =138062 NTopnodes=24977 NTopleaves=21855 tree-build-scalability=0.819507 SUBFIND: SO iteration 1: need to repeat for 2940182 halo centers. (took 0.0386148 sec) SUBFIND: SO iteration 2: need to repeat for 2940182 halo centers. (took 0.0316906 sec) SUBFIND: SO iteration 3: need to repeat for 2940182 halo centers. (took 0.0324557 sec) SUBFIND: SO iteration 4: need to repeat for 2940182 halo centers. (took 0.0323824 sec) SUBFIND: SO iteration 5: need to repeat for 2940182 halo centers. (took 0.0328079 sec) SUBFIND: SO iteration 6: need to repeat for 2940182 halo centers. (took 0.0317932 sec) SUBFIND: SO iteration 7: need to repeat for 2940182 halo centers. (took 0.0334158 sec) SUBFIND: SO iteration 8: need to repeat for 2940182 halo centers. (took 0.0335919 sec) SUBFIND: SO iteration 9: need to repeat for 2940182 halo centers. (took 0.0318432 sec) SUBFIND: SO iteration 10: need to repeat for 2940182 halo centers. (took 0.0317479 sec) SUBFIND: SO iteration 11: need to repeat for 2940182 halo centers. (took 0.0316381 sec) SUBFIND: SO iteration 12: need to repeat for 2940182 halo centers. (took 0.0316252 sec) SUBFIND: SO iteration 13: need to repeat for 2940182 halo centers. (took 0.0318395 sec) SUBFIND: SO iteration 14: need to repeat for 2940182 halo centers. (took 0.0316787 sec) SUBFIND: SO iteration 15: need to repeat for 2940182 halo centers. (took 0.0317453 sec) SUBFIND: SO iteration 16: need to repeat for 371568 halo centers. (took 0.0307573 sec) SUBFIND: SO iteration 17: need to repeat for 5861 halo centers. (took 0.00836782 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000848811 sec) SUBFIND: SO iteration 1: need to repeat for 2940182 halo centers. (took 0.0323597 sec) SUBFIND: SO iteration 2: need to repeat for 2940182 halo centers. (took 0.0312281 sec) SUBFIND: SO iteration 3: need to repeat for 2940182 halo centers. (took 0.0318299 sec) SUBFIND: SO iteration 4: need to repeat for 2940182 halo centers. (took 0.0324418 sec) SUBFIND: SO iteration 5: need to repeat for 2940182 halo centers. (took 0.031615 sec) SUBFIND: SO iteration 6: need to repeat for 2940182 halo centers. (took 0.0317731 sec) SUBFIND: SO iteration 7: need to repeat for 2940182 halo centers. (took 0.0318885 sec) SUBFIND: SO iteration 8: need to repeat for 2940182 halo centers. (took 0.0326201 sec) SUBFIND: SO iteration 9: need to repeat for 2940182 halo centers. (took 0.0340298 sec) SUBFIND: SO iteration 10: need to repeat for 2940182 halo centers. (took 0.0318292 sec) SUBFIND: SO iteration 11: need to repeat for 2940182 halo centers. (took 0.0318235 sec) SUBFIND: SO iteration 12: need to repeat for 2940182 halo centers. (took 0.0318373 sec) SUBFIND: SO iteration 13: need to repeat for 2940182 halo centers. (took 0.0331644 sec) SUBFIND: SO iteration 14: need to repeat for 2940182 halo centers. (took 0.0318427 sec) SUBFIND: SO iteration 15: need to repeat for 2940182 halo centers. (took 0.031948 sec) SUBFIND: SO iteration 16: need to repeat for 227051 halo centers. (took 0.0306548 sec) SUBFIND: SO iteration 17: need to repeat for 3204 halo centers. (took 0.00681717 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000539858 sec) SUBFIND: SO iteration 1: need to repeat for 2940182 halo centers. (took 0.0330263 sec) SUBFIND: SO iteration 2: need to repeat for 2940182 halo centers. (took 0.0312511 sec) SUBFIND: SO iteration 3: need to repeat for 2940182 halo centers. (took 0.0317586 sec) SUBFIND: SO iteration 4: need to repeat for 2940182 halo centers. (took 0.031815 sec) SUBFIND: SO iteration 5: need to repeat for 2940182 halo centers. (took 0.0316508 sec) SUBFIND: SO iteration 6: need to repeat for 2940182 halo centers. (took 0.0316968 sec) SUBFIND: SO iteration 7: need to repeat for 2940182 halo centers. (took 0.0318523 sec) SUBFIND: SO iteration 8: need to repeat for 2940182 halo centers. (took 0.031772 sec) SUBFIND: SO iteration 9: need to repeat for 2940182 halo centers. (took 0.0316745 sec) SUBFIND: SO iteration 10: need to repeat for 2940182 halo centers. (took 0.031767 sec) SUBFIND: SO iteration 11: need to repeat for 2940182 halo centers. (took 0.0316901 sec) SUBFIND: SO iteration 12: need to repeat for 2940182 halo centers. (took 0.0318386 sec) SUBFIND: SO iteration 13: need to repeat for 2940182 halo centers. (took 0.0320743 sec) SUBFIND: SO iteration 14: need to repeat for 2940182 halo centers. (took 0.0318876 sec) SUBFIND: SO iteration 15: need to repeat for 2940182 halo centers. (took 0.0324091 sec) SUBFIND: SO iteration 16: need to repeat for 378438 halo centers. (took 0.0310452 sec) SUBFIND: SO iteration 17: need to repeat for 5930 halo centers. (took 0.00856254 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000889713 sec) SUBFIND: SO iteration 1: need to repeat for 2940182 halo centers. (took 0.0325 sec) SUBFIND: SO iteration 2: need to repeat for 2940182 halo centers. (took 0.0317841 sec) SUBFIND: SO iteration 3: need to repeat for 2940182 halo centers. (took 0.0300613 sec) SUBFIND: SO iteration 4: need to repeat for 2940182 halo centers. (took 0.0308848 sec) SUBFIND: SO iteration 5: need to repeat for 2940182 halo centers. (took 0.0308231 sec) SUBFIND: SO iteration 6: need to repeat for 2940182 halo centers. (took 0.0308877 sec) SUBFIND: SO iteration 7: need to repeat for 2940182 halo centers. (took 0.0307017 sec) SUBFIND: SO iteration 8: need to repeat for 2940182 halo centers. (took 0.0307148 sec) SUBFIND: SO iteration 9: need to repeat for 2940182 halo centers. (took 0.0306573 sec) SUBFIND: SO iteration 10: need to repeat for 2940182 halo centers. (took 0.0310076 sec) SUBFIND: SO iteration 11: need to repeat for 2940182 halo centers. (took 0.0306406 sec) SUBFIND: SO iteration 12: need to repeat for 2940182 halo centers. (took 0.0306639 sec) SUBFIND: SO iteration 13: need to repeat for 2940182 halo centers. (took 0.0307229 sec) SUBFIND: SO iteration 14: need to repeat for 2940182 halo centers. (took 0.0307314 sec) SUBFIND: SO iteration 15: need to repeat for 2940182 halo centers. (took 0.0306595 sec) SUBFIND: SO iteration 16: need to repeat for 2666704 halo centers. (took 0.0305878 sec) SUBFIND: SO iteration 17: need to repeat for 220404 halo centers. (took 0.0273884 sec) SUBFIND: SO iteration 18: need to repeat for 34668 halo centers. (took 0.00672275 sec) SUBFIND: determining spherical overdensity masses took 2.10653 sec SUBFIND: assembled and ordered groups and subhalos (took 0.113069 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.00099 sec, total size 1099.33 MB, corresponds to effective I/O rate of 549.393 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.00328 sec SUBFIND: Finished with SUBFIND. (total time=183.468 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2940650 SUBFIND: Largest subhalo has 46 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133975855 FOF: preparing output order of particles took 1.40561 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.84229 sec, total size 5271.19 MB, corresponds to effective I/O rate of 596.134 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 423 (rank 423 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 436 (rank 436 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 442 (rank 442 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.