TACC: Starting up job 4242146 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186456.23 Mb (on task= 216), Smallest = 186403.41 Mb (on task= 0), Average = 186435.00 Mb Total Mem: Largest = 191515.35 Mb (on task= 297), Smallest = 191515.33 Mb (on task= 27), Average = 191515.34 Mb Committed_AS: Largest = 5111.92 Mb (on task= 0), Smallest = 5059.11 Mb (on task= 216), Average = 5080.33 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5111.92 Mb (on task= 0), Smallest = 5059.11 Mb (on task= 216), Average = 5080.33 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 297), Smallest = 95321.47 Mb (on task= 49), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c152-032.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.8589 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 59140654 (tot= 59140654) masstab= 0 READIC: Type 1: 74856099 (tot= 74856099) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 754 (tot= 754) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 5.14331 sec, total size 6359.52 MB, corresponds to effective I/O rate of 1236.46 MB/sec READIC: Total number of particles : 133997507 INIT: Testing ID uniqueness... INIT: success. took=0.0764177 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=23024, determination of top-level tree involved 5 iterations and took 0.687055 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=158 for nextra=62, reaching maximum imbalance of 1.09552|1.09682 DOMAIN: combining multiple-domains took 0.0144958 sec DOMAIN: exchange of 74856853 particles DOMAIN: particle exchange done. (took 0.355998 sec) DOMAIN: domain decomposition done. (took in total 1.06822 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0686092 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=169.016 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0919039 sec =105536 NTopnodes=26313 NTopleaves=23024 FOF: Start linking particles (presently allocated=192.495 MB) FOF: linking of small cells took 0.0021033 sec FOF: local links done (took 0.148023 sec, avg-work=0.133863, imbalance=1.09676). FOF: Marked=156099 out of the 74856099 primaries which are linked FOF: begin linking across processors (presently allocated=194.458 MB) FOF: have done 15844 cross links (processed 156099, took 0.00651075 sec) FOF: have done 3036 cross links (processed 75198, took 0.0056549 sec) FOF: have done 450 cross links (processed 10294, took 0.00479214 sec) FOF: have done 59 cross links (processed 1447, took 0.00447744 sec) FOF: have done 8 cross links (processed 172, took 0.00442428 sec) FOF: have done 1 cross links (processed 26, took 0.00437277 sec) FOF: have done 1 cross links (processed 4, took 0.00439501 sec) FOF: have done 0 cross links (processed 2, took 0.00434684 sec) FOF: Local groups found. FOF: primary group finding took = 0.199389 sec FOF: Start finding nearest dm-particle (presently allocated=192.495 MB) FOF: fof-nearest iteration 1: need to repeat for 58239908 particles. (took = 0.0843522 sec) FOF: fof-nearest iteration 2: need to repeat for 53836198 particles. (took = 0.0908738 sec) FOF: fof-nearest iteration 3: need to repeat for 40670277 particles. (took = 0.0983554 sec) FOF: fof-nearest iteration 4: need to repeat for 20308748 particles. (took = 0.0884588 sec) FOF: fof-nearest iteration 5: need to repeat for 4069435 particles. (took = 0.0550401 sec) FOF: fof-nearest iteration 6: need to repeat for 110332 particles. (took = 0.0165567 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.441993 sec FOF: compiling local group data and catalogue took = 0.0277217 sec FOF: Total number of FOF groups with at least 32 particles: 2638588 FOF: Largest FOF group has 100 particles. FOF: Total number of particles in FOF groups: 133997507 FOF: group properties are now allocated.. (presently allocated=176.306 MB) FOF: computation of group properties took = 0.0153269 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.121788 sec FOF: Finished computing FoF groups. Complete work took 0.971842 sec (presently allocated=171.259 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=181.382 MB) GRAVTREE: Tree construction done. took 0.411322 sec =135735 NTopnodes=26313 NTopleaves=23024 tree-build-scalability=0.806594 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 131348967 particles. (took 0.947154 sec) SUBFIND: ngb iteration 2: need to repeat for 128396706 particles. (took 0.774776 sec) SUBFIND: ngb iteration 3: need to repeat for 125447686 particles. (took 0.690224 sec) SUBFIND: ngb iteration 4: need to repeat for 122352650 particles. (took 0.623192 sec) SUBFIND: ngb iteration 5: need to repeat for 118351295 particles. (took 0.587171 sec) SUBFIND: ngb iteration 6: need to repeat for 111843105 particles. (took 0.563881 sec) SUBFIND: ngb iteration 7: need to repeat for 100534051 particles. (took 0.536886 sec) SUBFIND: ngb iteration 8: need to repeat for 84992962 particles. (took 0.470739 sec) SUBFIND: ngb iteration 9: need to repeat for 71454315 particles. (took 0.37002 sec) SUBFIND: ngb iteration 10: need to repeat for 63821529 particles. (took 0.276951 sec) SUBFIND: ngb iteration 11: need to repeat for 60658558 particles. (took 0.225899 sec) SUBFIND: ngb iteration 12: need to repeat for 59595298 particles. (took 0.212058 sec) SUBFIND: ngb iteration 13: need to repeat for 59278074 particles. (took 0.212045 sec) SUBFIND: ngb iteration 14: need to repeat for 59185781 particles. (took 0.213335 sec) SUBFIND: ngb iteration 15: need to repeat for 59156479 particles. (took 0.209334 sec) SUBFIND: ngb iteration 16: need to repeat for 59145940 particles. (took 0.201211 sec) SUBFIND: ngb iteration 17: need to repeat for 59139931 particles. (took 0.188712 sec) SUBFIND: ngb iteration 18: need to repeat for 59131877 particles. (took 0.173805 sec) SUBFIND: ngb iteration 19: need to repeat for 59118886 particles. (took 0.161535 sec) SUBFIND: ngb iteration 20: need to repeat for 59098741 particles. (took 0.154333 sec) SUBFIND: ngb iteration 21: need to repeat for 59066503 particles. (took 0.153444 sec) SUBFIND: ngb iteration 22: need to repeat for 59014311 particles. (took 0.154877 sec) SUBFIND: ngb iteration 23: need to repeat for 58932705 particles. (took 0.158742 sec) SUBFIND: ngb iteration 24: need to repeat for 58801494 particles. (took 0.162513 sec) SUBFIND: ngb iteration 25: need to repeat for 58584528 particles. (took 0.169555 sec) SUBFIND: ngb iteration 26: need to repeat for 58222712 particles. (took 0.178793 sec) SUBFIND: ngb iteration 27: need to repeat for 57633445 particles. (took 0.193132 sec) SUBFIND: ngb iteration 28: need to repeat for 56710838 particles. (took 0.215712 sec) SUBFIND: ngb iteration 29: need to repeat for 55326246 particles. (took 0.247947 sec) SUBFIND: ngb iteration 30: need to repeat for 53372959 particles. (took 0.289162 sec) SUBFIND: ngb iteration 31: need to repeat for 50805971 particles. (took 0.331774 sec) SUBFIND: ngb iteration 32: need to repeat for 47581739 particles. (took 0.364873 sec) SUBFIND: ngb iteration 33: need to repeat for 43611603 particles. (took 0.376131 sec) SUBFIND: ngb iteration 34: need to repeat for 38675221 particles. (took 0.364211 sec) SUBFIND: ngb iteration 35: need to repeat for 32692690 particles. (took 0.328767 sec) SUBFIND: ngb iteration 36: need to repeat for 25889569 particles. (took 0.282457 sec) SUBFIND: ngb iteration 37: need to repeat for 18813486 particles. (took 0.231055 sec) SUBFIND: ngb iteration 38: need to repeat for 12258952 particles. (took 0.178015 sec) SUBFIND: ngb iteration 39: need to repeat for 6993349 particles. (took 0.124576 sec) SUBFIND: ngb iteration 40: need to repeat for 3387381 particles. (took 0.079741 sec) SUBFIND: ngb iteration 41: need to repeat for 1350303 particles. (took 0.0453265 sec) SUBFIND: ngb iteration 42: need to repeat for 427874 particles. (took 0.0220658 sec) SUBFIND: ngb iteration 43: need to repeat for 104890 particles. (took 0.00943846 sec) SUBFIND: ngb iteration 44: need to repeat for 18893 particles. (took 0.0034958 sec) SUBFIND: ngb iteration 45: need to repeat for 2326 particles. (took 0.0011849 sec) SUBFIND: ngb iteration 46: need to repeat for 213 particles. (took 0.000409972 sec) SUBFIND: ngb iteration 47: need to repeat for 7 particles. (took 0.000233287 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 12.4687 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997507 particles, for threshold size factor 0.6) SUBFIND: The other 2638588 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00744178 sec SUBFIND: particle balance=1.09552 SUBFIND: subfind_exchange() took 0.445917 sec SUBFIND: particle balance for processing=1.00019 SUBFIND: subdomain decomposition took 0.104542 sec SUBFIND: serial subfind subdomain decomposition took 0.102935 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=6108 took 145.844 sec SUBFIND: root-task=0: Serial processing of halo 0 took 146.098 SUBFIND: Processing overall took (total time=147.985 sec) SUBFIND: 0 out of 1537 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 228166 SUBFIND: subfind_exchange() (for return to original CPU) took 0.504627 sec TREE: Full tree construction for all particles. (presently allocated=158.161 MB) GRAVTREE: Tree construction done. took 1.48781 sec =135735 NTopnodes=26313 NTopleaves=23024 tree-build-scalability=0.806594 SUBFIND: SO iteration 1: need to repeat for 2638298 halo centers. (took 0.0358476 sec) SUBFIND: SO iteration 2: need to repeat for 2638298 halo centers. (took 0.0303859 sec) SUBFIND: SO iteration 3: need to repeat for 2638298 halo centers. (took 0.0318088 sec) SUBFIND: SO iteration 4: need to repeat for 2638298 halo centers. (took 0.0313158 sec) SUBFIND: SO iteration 5: need to repeat for 2638298 halo centers. (took 0.0297103 sec) SUBFIND: SO iteration 6: need to repeat for 2638298 halo centers. (took 0.0316879 sec) SUBFIND: SO iteration 7: need to repeat for 2638298 halo centers. (took 0.0297262 sec) SUBFIND: SO iteration 8: need to repeat for 2638298 halo centers. (took 0.0296557 sec) SUBFIND: SO iteration 9: need to repeat for 2638298 halo centers. (took 0.0295284 sec) SUBFIND: SO iteration 10: need to repeat for 2638298 halo centers. (took 0.0296296 sec) SUBFIND: SO iteration 11: need to repeat for 2638298 halo centers. (took 0.0301491 sec) SUBFIND: SO iteration 12: need to repeat for 2638298 halo centers. (took 0.0296959 sec) SUBFIND: SO iteration 13: need to repeat for 2638298 halo centers. (took 0.0295953 sec) SUBFIND: SO iteration 14: need to repeat for 2638298 halo centers. (took 0.0296822 sec) SUBFIND: SO iteration 15: need to repeat for 2638298 halo centers. (took 0.0305605 sec) SUBFIND: SO iteration 16: need to repeat for 297703 halo centers. (took 0.0287428 sec) SUBFIND: SO iteration 17: need to repeat for 3446 halo centers. (took 0.00787772 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000574516 sec) SUBFIND: SO iteration 1: need to repeat for 2638298 halo centers. (took 0.0301619 sec) SUBFIND: SO iteration 2: need to repeat for 2638298 halo centers. (took 0.0291567 sec) SUBFIND: SO iteration 3: need to repeat for 2638298 halo centers. (took 0.0304866 sec) SUBFIND: SO iteration 4: need to repeat for 2638298 halo centers. (took 0.0296852 sec) SUBFIND: SO iteration 5: need to repeat for 2638298 halo centers. (took 0.0298581 sec) SUBFIND: SO iteration 6: need to repeat for 2638298 halo centers. (took 0.0297017 sec) SUBFIND: SO iteration 7: need to repeat for 2638298 halo centers. (took 0.0296851 sec) SUBFIND: SO iteration 8: need to repeat for 2638298 halo centers. (took 0.0297276 sec) SUBFIND: SO iteration 9: need to repeat for 2638298 halo centers. (took 0.0299199 sec) SUBFIND: SO iteration 10: need to repeat for 2638298 halo centers. (took 0.0301016 sec) SUBFIND: SO iteration 11: need to repeat for 2638298 halo centers. (took 0.0297548 sec) SUBFIND: SO iteration 12: need to repeat for 2638298 halo centers. (took 0.029758 sec) SUBFIND: SO iteration 13: need to repeat for 2638298 halo centers. (took 0.0296271 sec) SUBFIND: SO iteration 14: need to repeat for 2638298 halo centers. (took 0.0296179 sec) SUBFIND: SO iteration 15: need to repeat for 2638297 halo centers. (took 0.0297075 sec) SUBFIND: SO iteration 16: need to repeat for 181582 halo centers. (took 0.0286366 sec) SUBFIND: SO iteration 17: need to repeat for 2047 halo centers. (took 0.00642678 sec) SUBFIND: SO iteration 1: need to repeat for 2638298 halo centers. (took 0.0301002 sec) SUBFIND: SO iteration 2: need to repeat for 2638298 halo centers. (took 0.0292611 sec) SUBFIND: SO iteration 3: need to repeat for 2638298 halo centers. (took 0.0304352 sec) SUBFIND: SO iteration 4: need to repeat for 2638298 halo centers. (took 0.0299729 sec) SUBFIND: SO iteration 5: need to repeat for 2638298 halo centers. (took 0.0296382 sec) SUBFIND: SO iteration 6: need to repeat for 2638298 halo centers. (took 0.0295645 sec) SUBFIND: SO iteration 7: need to repeat for 2638298 halo centers. (took 0.0295786 sec) SUBFIND: SO iteration 8: need to repeat for 2638298 halo centers. (took 0.0299691 sec) SUBFIND: SO iteration 9: need to repeat for 2638298 halo centers. (took 0.0295442 sec) SUBFIND: SO iteration 10: need to repeat for 2638298 halo centers. (took 0.0297765 sec) SUBFIND: SO iteration 11: need to repeat for 2638298 halo centers. (took 0.0298426 sec) SUBFIND: SO iteration 12: need to repeat for 2638298 halo centers. (took 0.0295985 sec) SUBFIND: SO iteration 13: need to repeat for 2638298 halo centers. (took 0.0295309 sec) SUBFIND: SO iteration 14: need to repeat for 2638298 halo centers. (took 0.0296416 sec) SUBFIND: SO iteration 15: need to repeat for 2638298 halo centers. (took 0.0296167 sec) SUBFIND: SO iteration 16: need to repeat for 304370 halo centers. (took 0.0287776 sec) SUBFIND: SO iteration 17: need to repeat for 3580 halo centers. (took 0.00775378 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000569336 sec) SUBFIND: SO iteration 1: need to repeat for 2638298 halo centers. (took 0.0319997 sec) SUBFIND: SO iteration 2: need to repeat for 2638298 halo centers. (took 0.0293787 sec) SUBFIND: SO iteration 3: need to repeat for 2638298 halo centers. (took 0.0280857 sec) SUBFIND: SO iteration 4: need to repeat for 2638298 halo centers. (took 0.0286962 sec) SUBFIND: SO iteration 5: need to repeat for 2638298 halo centers. (took 0.0287319 sec) SUBFIND: SO iteration 6: need to repeat for 2638298 halo centers. (took 0.0287191 sec) SUBFIND: SO iteration 7: need to repeat for 2638298 halo centers. (took 0.0289479 sec) SUBFIND: SO iteration 8: need to repeat for 2638298 halo centers. (took 0.0291941 sec) SUBFIND: SO iteration 9: need to repeat for 2638298 halo centers. (took 0.0286932 sec) SUBFIND: SO iteration 10: need to repeat for 2638298 halo centers. (took 0.0288952 sec) SUBFIND: SO iteration 11: need to repeat for 2638298 halo centers. (took 0.0288845 sec) SUBFIND: SO iteration 12: need to repeat for 2638298 halo centers. (took 0.0286469 sec) SUBFIND: SO iteration 13: need to repeat for 2638298 halo centers. (took 0.0291848 sec) SUBFIND: SO iteration 14: need to repeat for 2638298 halo centers. (took 0.0293674 sec) SUBFIND: SO iteration 15: need to repeat for 2638298 halo centers. (took 0.029242 sec) SUBFIND: SO iteration 16: need to repeat for 2363245 halo centers. (took 0.0291864 sec) SUBFIND: SO iteration 17: need to repeat for 242319 halo centers. (took 0.0259941 sec) SUBFIND: SO iteration 18: need to repeat for 33277 halo centers. (took 0.00738776 sec) SUBFIND: determining spherical overdensity masses took 1.97181 sec SUBFIND: assembled and ordered groups and subhalos (took 0.106647 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.82585 sec, total size 986.665 MB, corresponds to effective I/O rate of 540.387 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.82786 sec SUBFIND: Finished with SUBFIND. (total time=167.303 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2639822 SUBFIND: Largest subhalo has 100 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133981642 FOF: preparing output order of particles took 1.42241 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.36391 sec, total size 5277.25 MB, corresponds to effective I/O rate of 716.637 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 31 (rank 31 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 28 (rank 28 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 48 (rank 48 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 50 (rank 50 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.