TACC: Starting up job 4243127 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186331.99 Mb (on task= 756), Smallest = 186186.12 Mb (on task= 648), Average = 186286.75 Mb Total Mem: Largest = 191386.89 Mb (on task= 837), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5200.77 Mb (on task= 648), Smallest = 5054.90 Mb (on task= 756), Average = 5100.14 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5200.77 Mb (on task= 648), Smallest = 5054.90 Mb (on task= 756), Average = 5100.14 Mb avail /dev/shm: Largest = 95257.22 Mb (on task= 513), Smallest = 95257.16 Mb (on task= 739), Average = 95257.20 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c203-034.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.2584 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 60164817 (tot= 60164817) masstab= 0 READIC: Type 1: 73831687 (tot= 73831687) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 990 (tot= 990) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.11811 sec, total size 6363.43 MB, corresponds to effective I/O rate of 1545.23 MB/sec READIC: Total number of particles : 133997494 INIT: Testing ID uniqueness... INIT: success. took=0.0668125 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=31039, determination of top-level tree involved 5 iterations and took 0.372464 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=175 for nextra=125, reaching maximum imbalance of 1.11188|1.11203 DOMAIN: combining multiple-domains took 0.0153391 sec DOMAIN: exchange of 73832677 particles DOMAIN: particle exchange done. (took 0.202252 sec) DOMAIN: domain decomposition done. (took in total 0.595776 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0326267 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=85.2247 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0526524 sec =72389.2 NTopnodes=35473 NTopleaves=31039 FOF: Start linking particles (presently allocated=96.9922 MB) FOF: linking of small cells took 0.000764348 sec FOF: local links done (took 0.0757389 sec, avg-work=0.0672416, imbalance=1.12175). FOF: Marked=188547 out of the 73831687 primaries which are linked FOF: begin linking across processors (presently allocated=98.0182 MB) FOF: have done 18143 cross links (processed 188547, took 0.00384734 sec) FOF: have done 3492 cross links (processed 91633, took 0.00315338 sec) FOF: have done 552 cross links (processed 12471, took 0.00266022 sec) FOF: have done 77 cross links (processed 1820, took 0.00240502 sec) FOF: have done 9 cross links (processed 213, took 0.00236103 sec) FOF: have done 1 cross links (processed 23, took 0.00236842 sec) FOF: have done 0 cross links (processed 2, took 0.00236524 sec) FOF: Local groups found. FOF: primary group finding took = 0.100189 sec FOF: Start finding nearest dm-particle (presently allocated=96.9922 MB) FOF: fof-nearest iteration 1: need to repeat for 59164684 particles. (took = 0.0447862 sec) FOF: fof-nearest iteration 2: need to repeat for 54302683 particles. (took = 0.0479515 sec) FOF: fof-nearest iteration 3: need to repeat for 40097206 particles. (took = 0.0521314 sec) FOF: fof-nearest iteration 4: need to repeat for 18963884 particles. (took = 0.0470155 sec) FOF: fof-nearest iteration 5: need to repeat for 3485665 particles. (took = 0.0282874 sec) FOF: fof-nearest iteration 6: need to repeat for 93314 particles. (took = 0.00800966 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.232367 sec FOF: compiling local group data and catalogue took = 0.0130255 sec FOF: Total number of FOF groups with at least 32 particles: 2223354 FOF: Largest FOF group has 61 particles. FOF: Total number of particles in FOF groups: 133997494 FOF: group properties are now allocated.. (presently allocated=88.582 MB) FOF: computation of group properties took = 0.00646555 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.230319 sec FOF: Finished computing FoF groups. Complete work took 0.752419 sec (presently allocated=86.1467 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=91.295 MB) GRAVTREE: Tree construction done. took 0.149829 sec =87424.3 NTopnodes=35473 NTopleaves=31039 tree-build-scalability=0.594713 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 126473418 particles. (took 0.423599 sec) SUBFIND: ngb iteration 2: need to repeat for 118615691 particles. (took 0.330661 sec) SUBFIND: ngb iteration 3: need to repeat for 111624915 particles. (took 0.274911 sec) SUBFIND: ngb iteration 4: need to repeat for 105995325 particles. (took 0.23316 sec) SUBFIND: ngb iteration 5: need to repeat for 101269086 particles. (took 0.215593 sec) SUBFIND: ngb iteration 6: need to repeat for 96287474 particles. (took 0.203387 sec) SUBFIND: ngb iteration 7: need to repeat for 89421405 particles. (took 0.194637 sec) SUBFIND: ngb iteration 8: need to repeat for 80459105 particles. (took 0.179699 sec) SUBFIND: ngb iteration 9: need to repeat for 72034100 particles. (took 0.159266 sec) SUBFIND: ngb iteration 10: need to repeat for 66294572 particles. (took 0.138459 sec) SUBFIND: ngb iteration 11: need to repeat for 63146438 particles. (took 0.126123 sec) SUBFIND: ngb iteration 12: need to repeat for 61605449 particles. (took 0.121285 sec) SUBFIND: ngb iteration 13: need to repeat for 60875530 particles. (took 0.120799 sec) SUBFIND: ngb iteration 14: need to repeat for 60519593 particles. (took 0.120816 sec) SUBFIND: ngb iteration 15: need to repeat for 60334118 particles. (took 0.119217 sec) SUBFIND: ngb iteration 16: need to repeat for 60224178 particles. (took 0.113804 sec) SUBFIND: ngb iteration 17: need to repeat for 60137840 particles. (took 0.106556 sec) SUBFIND: ngb iteration 18: need to repeat for 60047263 particles. (took 0.0980194 sec) SUBFIND: ngb iteration 19: need to repeat for 59941166 particles. (took 0.0907079 sec) SUBFIND: ngb iteration 20: need to repeat for 59810461 particles. (took 0.0863193 sec) SUBFIND: ngb iteration 21: need to repeat for 59636107 particles. (took 0.0851718 sec) SUBFIND: ngb iteration 22: need to repeat for 59385446 particles. (took 0.0857762 sec) SUBFIND: ngb iteration 23: need to repeat for 59019409 particles. (took 0.087016 sec) SUBFIND: ngb iteration 24: need to repeat for 58468103 particles. (took 0.088302 sec) SUBFIND: ngb iteration 25: need to repeat for 57630069 particles. (took 0.0904307 sec) SUBFIND: ngb iteration 26: need to repeat for 56367656 particles. (took 0.0932509 sec) SUBFIND: ngb iteration 27: need to repeat for 54500111 particles. (took 0.0971615 sec) SUBFIND: ngb iteration 28: need to repeat for 51795714 particles. (took 0.10158 sec) SUBFIND: ngb iteration 29: need to repeat for 48096597 particles. (took 0.108499 sec) SUBFIND: ngb iteration 30: need to repeat for 43375921 particles. (took 0.115289 sec) SUBFIND: ngb iteration 31: need to repeat for 38000519 particles. (took 0.120712 sec) SUBFIND: ngb iteration 32: need to repeat for 32538903 particles. (took 0.125551 sec) SUBFIND: ngb iteration 33: need to repeat for 27428657 particles. (took 0.122553 sec) SUBFIND: ngb iteration 34: need to repeat for 22719679 particles. (took 0.112318 sec) SUBFIND: ngb iteration 35: need to repeat for 18187449 particles. (took 0.0941017 sec) SUBFIND: ngb iteration 36: need to repeat for 13808598 particles. (took 0.0773648 sec) SUBFIND: ngb iteration 37: need to repeat for 9768015 particles. (took 0.0619268 sec) SUBFIND: ngb iteration 38: need to repeat for 6307811 particles. (took 0.0472162 sec) SUBFIND: ngb iteration 39: need to repeat for 3628629 particles. (took 0.0338742 sec) SUBFIND: ngb iteration 40: need to repeat for 1822318 particles. (took 0.0223973 sec) SUBFIND: ngb iteration 41: need to repeat for 775871 particles. (took 0.0135204 sec) SUBFIND: ngb iteration 42: need to repeat for 275900 particles. (took 0.00734276 sec) SUBFIND: ngb iteration 43: need to repeat for 78911 particles. (took 0.00369938 sec) SUBFIND: ngb iteration 44: need to repeat for 17874 particles. (took 0.00184134 sec) SUBFIND: ngb iteration 45: need to repeat for 3241 particles. (took 0.00082125 sec) SUBFIND: ngb iteration 46: need to repeat for 468 particles. (took 0.000393843 sec) SUBFIND: ngb iteration 47: need to repeat for 50 particles. (took 0.000291003 sec) SUBFIND: ngb iteration 48: need to repeat for 5 particles. (took 0.000239406 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 5.25934 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997494 particles, for threshold size factor 0.6) SUBFIND: The other 2223354 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00442049 sec SUBFIND: particle balance=1.11165 SUBFIND: subfind_exchange() took 0.231727 sec SUBFIND: particle balance for processing=1.00027 SUBFIND: subdomain decomposition took 0.0516295 sec SUBFIND: serial subfind subdomain decomposition took 0.0509065 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2574 took 26.5725 sec SUBFIND: root-task=0: Serial processing of halo 0 took 26.6973 SUBFIND: Processing overall took (total time=27.545 sec) SUBFIND: 0 out of 2313 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258486 ALLOCATE: Changing to MaxPartSph = 116060 SUBFIND: subfind_exchange() (for return to original CPU) took 0.257597 sec TREE: Full tree construction for all particles. (presently allocated=79.0982 MB) GRAVTREE: Tree construction done. took 0.804934 sec =87424.3 NTopnodes=35473 NTopleaves=31039 tree-build-scalability=0.594713 SUBFIND: SO iteration 1: need to repeat for 2223250 halo centers. (took 0.0214729 sec) SUBFIND: SO iteration 2: need to repeat for 2223250 halo centers. (took 0.0192737 sec) SUBFIND: SO iteration 3: need to repeat for 2223250 halo centers. (took 0.0194978 sec) SUBFIND: SO iteration 4: need to repeat for 2223250 halo centers. (took 0.0193295 sec) SUBFIND: SO iteration 5: need to repeat for 2223250 halo centers. (took 0.0194588 sec) SUBFIND: SO iteration 6: need to repeat for 2223250 halo centers. (took 0.0194396 sec) SUBFIND: SO iteration 7: need to repeat for 2223250 halo centers. (took 0.0195867 sec) SUBFIND: SO iteration 8: need to repeat for 2223250 halo centers. (took 0.0194356 sec) SUBFIND: SO iteration 9: need to repeat for 2223250 halo centers. (took 0.019349 sec) SUBFIND: SO iteration 10: need to repeat for 2223250 halo centers. (took 0.019316 sec) SUBFIND: SO iteration 11: need to repeat for 2223250 halo centers. (took 0.0193548 sec) SUBFIND: SO iteration 12: need to repeat for 2223250 halo centers. (took 0.0195809 sec) SUBFIND: SO iteration 13: need to repeat for 2223250 halo centers. (took 0.0192498 sec) SUBFIND: SO iteration 14: need to repeat for 2223250 halo centers. (took 0.019331 sec) SUBFIND: SO iteration 15: need to repeat for 2223250 halo centers. (took 0.019212 sec) SUBFIND: SO iteration 16: need to repeat for 206407 halo centers. (took 0.0188632 sec) SUBFIND: SO iteration 17: need to repeat for 1439 halo centers. (took 0.00684342 sec) SUBFIND: SO iteration 1: need to repeat for 2223250 halo centers. (took 0.0193434 sec) SUBFIND: SO iteration 2: need to repeat for 2223250 halo centers. (took 0.018974 sec) SUBFIND: SO iteration 3: need to repeat for 2223250 halo centers. (took 0.0192643 sec) SUBFIND: SO iteration 4: need to repeat for 2223250 halo centers. (took 0.0192901 sec) SUBFIND: SO iteration 5: need to repeat for 2223250 halo centers. (took 0.0192516 sec) SUBFIND: SO iteration 6: need to repeat for 2223250 halo centers. (took 0.0192829 sec) SUBFIND: SO iteration 7: need to repeat for 2223250 halo centers. (took 0.0192324 sec) SUBFIND: SO iteration 8: need to repeat for 2223250 halo centers. (took 0.0192773 sec) SUBFIND: SO iteration 9: need to repeat for 2223250 halo centers. (took 0.0192931 sec) SUBFIND: SO iteration 10: need to repeat for 2223250 halo centers. (took 0.0193435 sec) SUBFIND: SO iteration 11: need to repeat for 2223250 halo centers. (took 0.019264 sec) SUBFIND: SO iteration 12: need to repeat for 2223250 halo centers. (took 0.0193039 sec) SUBFIND: SO iteration 13: need to repeat for 2223250 halo centers. (took 0.0193045 sec) SUBFIND: SO iteration 14: need to repeat for 2223250 halo centers. (took 0.0193019 sec) SUBFIND: SO iteration 15: need to repeat for 2223250 halo centers. (took 0.0193193 sec) SUBFIND: SO iteration 16: need to repeat for 122245 halo centers. (took 0.0188133 sec) SUBFIND: SO iteration 17: need to repeat for 882 halo centers. (took 0.00510739 sec) SUBFIND: SO iteration 1: need to repeat for 2223250 halo centers. (took 0.0194179 sec) SUBFIND: SO iteration 2: need to repeat for 2223250 halo centers. (took 0.0190702 sec) SUBFIND: SO iteration 3: need to repeat for 2223250 halo centers. (took 0.0193897 sec) SUBFIND: SO iteration 4: need to repeat for 2223250 halo centers. (took 0.0192618 sec) SUBFIND: SO iteration 5: need to repeat for 2223250 halo centers. (took 0.0192557 sec) SUBFIND: SO iteration 6: need to repeat for 2223250 halo centers. (took 0.0192569 sec) SUBFIND: SO iteration 7: need to repeat for 2223250 halo centers. (took 0.0192325 sec) SUBFIND: SO iteration 8: need to repeat for 2223250 halo centers. (took 0.0192728 sec) SUBFIND: SO iteration 9: need to repeat for 2223250 halo centers. (took 0.0192532 sec) SUBFIND: SO iteration 10: need to repeat for 2223250 halo centers. (took 0.019264 sec) SUBFIND: SO iteration 11: need to repeat for 2223250 halo centers. (took 0.0192702 sec) SUBFIND: SO iteration 12: need to repeat for 2223250 halo centers. (took 0.0191961 sec) SUBFIND: SO iteration 13: need to repeat for 2223250 halo centers. (took 0.0192606 sec) SUBFIND: SO iteration 14: need to repeat for 2223250 halo centers. (took 0.0192989 sec) SUBFIND: SO iteration 15: need to repeat for 2223250 halo centers. (took 0.0192029 sec) SUBFIND: SO iteration 16: need to repeat for 210344 halo centers. (took 0.018884 sec) SUBFIND: SO iteration 17: need to repeat for 1477 halo centers. (took 0.00691856 sec) SUBFIND: SO iteration 1: need to repeat for 2223250 halo centers. (took 0.0192899 sec) SUBFIND: SO iteration 2: need to repeat for 2223250 halo centers. (took 0.0190305 sec) SUBFIND: SO iteration 3: need to repeat for 2223250 halo centers. (took 0.0186608 sec) SUBFIND: SO iteration 4: need to repeat for 2223250 halo centers. (took 0.0189729 sec) SUBFIND: SO iteration 5: need to repeat for 2223250 halo centers. (took 0.0191611 sec) SUBFIND: SO iteration 6: need to repeat for 2223250 halo centers. (took 0.0193156 sec) SUBFIND: SO iteration 7: need to repeat for 2223250 halo centers. (took 0.0200886 sec) SUBFIND: SO iteration 8: need to repeat for 2223250 halo centers. (took 0.0197692 sec) SUBFIND: SO iteration 9: need to repeat for 2223250 halo centers. (took 0.0196942 sec) SUBFIND: SO iteration 10: need to repeat for 2223250 halo centers. (took 0.0202159 sec) SUBFIND: SO iteration 11: need to repeat for 2223250 halo centers. (took 0.01949 sec) SUBFIND: SO iteration 12: need to repeat for 2223250 halo centers. (took 0.0194422 sec) SUBFIND: SO iteration 13: need to repeat for 2223250 halo centers. (took 0.0194761 sec) SUBFIND: SO iteration 14: need to repeat for 2223250 halo centers. (took 0.0193419 sec) SUBFIND: SO iteration 15: need to repeat for 2223250 halo centers. (took 0.0190628 sec) SUBFIND: SO iteration 16: need to repeat for 1937212 halo centers. (took 0.019166 sec) SUBFIND: SO iteration 17: need to repeat for 207659 halo centers. (took 0.0172963 sec) SUBFIND: SO iteration 18: need to repeat for 20545 halo centers. (took 0.00689031 sec) SUBFIND: determining spherical overdensity masses took 1.28647 sec SUBFIND: assembled and ordered groups and subhalos (took 0.251872 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 4.2606 sec, total size 831.63 MB, corresponds to effective I/O rate of 195.191 MB/sec SUBFIND: Subgroup catalogues saved. took = 4.26195 sec SUBFIND: Finished with SUBFIND. (total time=40.0964 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2225540 SUBFIND: Largest subhalo has 61 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133990421 FOF: preparing output order of particles took 0.956538 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.64132 sec, total size 5288.97 MB, corresponds to effective I/O rate of 612.056 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 506 (rank 506 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 241 (rank 241 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 251 (rank 251 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 227 (rank 227 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 243 (rank 243 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 539 (rank 539 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 547 (rank 547 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.