TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186498.54 Mb (on task= 189), Smallest = 186388.45 Mb (on task= 0), Average = 186450.49 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5126.89 Mb (on task= 0), Smallest = 5016.79 Mb (on task= 189), Average = 5064.84 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5126.89 Mb (on task= 0), Smallest = 5016.79 Mb (on task= 189), Average = 5064.84 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.41 Mb (on task= 105), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.5833 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 61552910 (tot= 61552910) masstab= 0 READIC: Type 1: 72442321 (tot= 72442321) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 2236 (tot= 2236) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.22328 sec, total size 6368.72 MB, corresponds to effective I/O rate of 1508.01 MB/sec READIC: Total number of particles : 133997467 INIT: Testing ID uniqueness... INIT: success. took=0.0734792 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=16143, determination of top-level tree involved 5 iterations and took 0.637123 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=190 for nextra=122, reaching maximum imbalance of 1.12299|1.12365 DOMAIN: combining multiple-domains took 0.0134309 sec DOMAIN: exchange of 72444557 particles DOMAIN: particle exchange done. (took 0.375107 sec) DOMAIN: domain decomposition done. (took in total 1.03617 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0741517 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=170.714 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0912433 sec =85726.3 NTopnodes=18449 NTopleaves=16143 FOF: Start linking particles (presently allocated=194.831 MB) FOF: linking of small cells took 0.00182586 sec FOF: local links done (took 0.153907 sec, avg-work=0.13567, imbalance=1.12949). FOF: Marked=149801 out of the 72442321 primaries which are linked FOF: begin linking across processors (presently allocated=196.777 MB) FOF: have done 12976 cross links (processed 149801, took 0.00635718 sec) FOF: have done 2652 cross links (processed 71671, took 0.00545116 sec) FOF: have done 449 cross links (processed 9746, took 0.00484418 sec) FOF: have done 82 cross links (processed 1552, took 0.00461717 sec) FOF: have done 10 cross links (processed 280, took 0.00455789 sec) FOF: have done 2 cross links (processed 45, took 0.00444331 sec) FOF: have done 0 cross links (processed 8, took 0.00440769 sec) FOF: Local groups found. FOF: primary group finding took = 0.200966 sec FOF: Start finding nearest dm-particle (presently allocated=194.831 MB) FOF: fof-nearest iteration 1: need to repeat for 60365956 particles. (took = 0.0901824 sec) FOF: fof-nearest iteration 2: need to repeat for 54662710 particles. (took = 0.100298 sec) FOF: fof-nearest iteration 3: need to repeat for 38766430 particles. (took = 0.108923 sec) FOF: fof-nearest iteration 4: need to repeat for 16917246 particles. (took = 0.0941954 sec) FOF: fof-nearest iteration 5: need to repeat for 2837374 particles. (took = 0.0521787 sec) FOF: fof-nearest iteration 6: need to repeat for 75722 particles. (took = 0.0137432 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.468151 sec FOF: compiling local group data and catalogue took = 0.027406 sec FOF: Total number of FOF groups with at least 32 particles: 1805681 FOF: Largest FOF group has 75 particles. FOF: Total number of particles in FOF groups: 133997467 FOF: group properties are now allocated.. (presently allocated=177.492 MB) FOF: computation of group properties took = 0.0122774 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.109309 sec FOF: Finished computing FoF groups. Complete work took 0.973306 sec (presently allocated=172.311 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=182.687 MB) GRAVTREE: Tree construction done. took 0.301409 sec =115705 NTopnodes=18449 NTopleaves=16143 tree-build-scalability=0.840921 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133740986 particles. (took 0.811638 sec) SUBFIND: ngb iteration 2: need to repeat for 133366964 particles. (took 0.695735 sec) SUBFIND: ngb iteration 3: need to repeat for 132808120 particles. (took 0.640403 sec) SUBFIND: ngb iteration 4: need to repeat for 131890633 particles. (took 0.60936 sec) SUBFIND: ngb iteration 5: need to repeat for 130244884 particles. (took 0.593691 sec) SUBFIND: ngb iteration 6: need to repeat for 127076091 particles. (took 0.597474 sec) SUBFIND: ngb iteration 7: need to repeat for 120938002 particles. (took 0.598088 sec) SUBFIND: ngb iteration 8: need to repeat for 110043590 particles. (took 0.581839 sec) SUBFIND: ngb iteration 9: need to repeat for 94928507 particles. (took 0.528363 sec) SUBFIND: ngb iteration 10: need to repeat for 80867263 particles. (took 0.448231 sec) SUBFIND: ngb iteration 11: need to repeat for 71641772 particles. (took 0.369141 sec) SUBFIND: ngb iteration 12: need to repeat for 66650291 particles. (took 0.324169 sec) SUBFIND: ngb iteration 13: need to repeat for 64164327 particles. (took 0.306807 sec) SUBFIND: ngb iteration 14: need to repeat for 62929187 particles. (took 0.296348 sec) SUBFIND: ngb iteration 15: need to repeat for 62279177 particles. (took 0.285841 sec) SUBFIND: ngb iteration 16: need to repeat for 61905433 particles. (took 0.269941 sec) SUBFIND: ngb iteration 17: need to repeat for 61665938 particles. (took 0.250422 sec) SUBFIND: ngb iteration 18: need to repeat for 61495455 particles. (took 0.229492 sec) SUBFIND: ngb iteration 19: need to repeat for 61362062 particles. (took 0.212062 sec) SUBFIND: ngb iteration 20: need to repeat for 61239103 particles. (took 0.201609 sec) SUBFIND: ngb iteration 21: need to repeat for 61103308 particles. (took 0.198523 sec) SUBFIND: ngb iteration 22: need to repeat for 60932420 particles. (took 0.198904 sec) SUBFIND: ngb iteration 23: need to repeat for 60708674 particles. (took 0.200821 sec) SUBFIND: ngb iteration 24: need to repeat for 60407113 particles. (took 0.204242 sec) SUBFIND: ngb iteration 25: need to repeat for 59992240 particles. (took 0.208335 sec) SUBFIND: ngb iteration 26: need to repeat for 59427640 particles. (took 0.215256 sec) SUBFIND: ngb iteration 27: need to repeat for 58653406 particles. (took 0.227502 sec) SUBFIND: ngb iteration 28: need to repeat for 57601597 particles. (took 0.244015 sec) SUBFIND: ngb iteration 29: need to repeat for 56197549 particles. (took 0.26647 sec) SUBFIND: ngb iteration 30: need to repeat for 54344730 particles. (took 0.291158 sec) SUBFIND: ngb iteration 31: need to repeat for 51952268 particles. (took 0.316563 sec) SUBFIND: ngb iteration 32: need to repeat for 48932015 particles. (took 0.335302 sec) SUBFIND: ngb iteration 33: need to repeat for 45174411 particles. (took 0.343447 sec) SUBFIND: ngb iteration 34: need to repeat for 40629466 particles. (took 0.343757 sec) SUBFIND: ngb iteration 35: need to repeat for 35293284 particles. (took 0.324397 sec) SUBFIND: ngb iteration 36: need to repeat for 29302704 particles. (took 0.293367 sec) SUBFIND: ngb iteration 37: need to repeat for 22986328 particles. (took 0.253263 sec) SUBFIND: ngb iteration 38: need to repeat for 16779942 particles. (took 0.210535 sec) SUBFIND: ngb iteration 39: need to repeat for 11194871 particles. (took 0.166822 sec) SUBFIND: ngb iteration 40: need to repeat for 6689629 particles. (took 0.121809 sec) SUBFIND: ngb iteration 41: need to repeat for 3492751 particles. (took 0.0801671 sec) SUBFIND: ngb iteration 42: need to repeat for 1543476 particles. (took 0.0477291 sec) SUBFIND: ngb iteration 43: need to repeat for 561368 particles. (took 0.0252785 sec) SUBFIND: ngb iteration 44: need to repeat for 159802 particles. (took 0.0111631 sec) SUBFIND: ngb iteration 45: need to repeat for 33080 particles. (took 0.00431145 sec) SUBFIND: ngb iteration 46: need to repeat for 4905 particles. (took 0.00155068 sec) SUBFIND: ngb iteration 47: need to repeat for 579 particles. (took 0.00057606 sec) SUBFIND: ngb iteration 48: need to repeat for 35 particles. (took 0.000269243 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 13.9952 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997467 particles, for threshold size factor 0.6) SUBFIND: The other 1805681 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00510974 sec SUBFIND: particle balance=1.12299 SUBFIND: subfind_exchange() took 0.451203 sec SUBFIND: particle balance for processing=1.00004 SUBFIND: subdomain decomposition took 0.104571 sec SUBFIND: serial subfind subdomain decomposition took 0.103429 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=4180 took 99.4183 sec SUBFIND: root-task=0: Serial processing of halo 0 took 99.6726 SUBFIND: Processing overall took (total time=100.243 sec) SUBFIND: 0 out of 6503 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 237473 SUBFIND: subfind_exchange() (for return to original CPU) took 0.514982 sec TREE: Full tree construction for all particles. (presently allocated=160.291 MB) GRAVTREE: Tree construction done. took 1.47373 sec =115705 NTopnodes=18449 NTopleaves=16143 tree-build-scalability=0.840921 SUBFIND: SO iteration 1: need to repeat for 1805631 halo centers. (took 0.0292928 sec) SUBFIND: SO iteration 2: need to repeat for 1805631 halo centers. (took 0.0243126 sec) SUBFIND: SO iteration 3: need to repeat for 1805631 halo centers. (took 0.0252052 sec) SUBFIND: SO iteration 4: need to repeat for 1805631 halo centers. (took 0.0244265 sec) SUBFIND: SO iteration 5: need to repeat for 1805631 halo centers. (took 0.0243551 sec) SUBFIND: SO iteration 6: need to repeat for 1805631 halo centers. (took 0.0243453 sec) SUBFIND: SO iteration 7: need to repeat for 1805631 halo centers. (took 0.0249643 sec) SUBFIND: SO iteration 8: need to repeat for 1805631 halo centers. (took 0.0242542 sec) SUBFIND: SO iteration 9: need to repeat for 1805631 halo centers. (took 0.0243136 sec) SUBFIND: SO iteration 10: need to repeat for 1805631 halo centers. (took 0.0242999 sec) SUBFIND: SO iteration 11: need to repeat for 1805631 halo centers. (took 0.0243054 sec) SUBFIND: SO iteration 12: need to repeat for 1805631 halo centers. (took 0.0243668 sec) SUBFIND: SO iteration 13: need to repeat for 1805631 halo centers. (took 0.0243497 sec) SUBFIND: SO iteration 14: need to repeat for 1805631 halo centers. (took 0.0242238 sec) SUBFIND: SO iteration 15: need to repeat for 1805631 halo centers. (took 0.0242463 sec) SUBFIND: SO iteration 16: need to repeat for 128409 halo centers. (took 0.0236129 sec) SUBFIND: SO iteration 17: need to repeat for 1518 halo centers. (took 0.00586319 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.000361755 sec) SUBFIND: SO iteration 1: need to repeat for 1805631 halo centers. (took 0.024634 sec) SUBFIND: SO iteration 2: need to repeat for 1805631 halo centers. (took 0.0242002 sec) SUBFIND: SO iteration 3: need to repeat for 1805631 halo centers. (took 0.0246837 sec) SUBFIND: SO iteration 4: need to repeat for 1805631 halo centers. (took 0.0256915 sec) SUBFIND: SO iteration 5: need to repeat for 1805631 halo centers. (took 0.0249102 sec) SUBFIND: SO iteration 6: need to repeat for 1805631 halo centers. (took 0.0246236 sec) SUBFIND: SO iteration 7: need to repeat for 1805631 halo centers. (took 0.0246546 sec) SUBFIND: SO iteration 8: need to repeat for 1805631 halo centers. (took 0.0248196 sec) SUBFIND: SO iteration 9: need to repeat for 1805631 halo centers. (took 0.0242326 sec) SUBFIND: SO iteration 10: need to repeat for 1805631 halo centers. (took 0.0243197 sec) SUBFIND: SO iteration 11: need to repeat for 1805631 halo centers. (took 0.0242003 sec) SUBFIND: SO iteration 12: need to repeat for 1805631 halo centers. (took 0.0243753 sec) SUBFIND: SO iteration 13: need to repeat for 1805631 halo centers. (took 0.0242782 sec) SUBFIND: SO iteration 14: need to repeat for 1805631 halo centers. (took 0.0243275 sec) SUBFIND: SO iteration 15: need to repeat for 1805631 halo centers. (took 0.0242639 sec) SUBFIND: SO iteration 16: need to repeat for 73980 halo centers. (took 0.0235959 sec) SUBFIND: SO iteration 17: need to repeat for 350 halo centers. (took 0.00473662 sec) SUBFIND: SO iteration 1: need to repeat for 1805631 halo centers. (took 0.024459 sec) SUBFIND: SO iteration 2: need to repeat for 1805631 halo centers. (took 0.0240482 sec) SUBFIND: SO iteration 3: need to repeat for 1805631 halo centers. (took 0.0245993 sec) SUBFIND: SO iteration 4: need to repeat for 1805631 halo centers. (took 0.0243681 sec) SUBFIND: SO iteration 5: need to repeat for 1805631 halo centers. (took 0.0243092 sec) SUBFIND: SO iteration 6: need to repeat for 1805631 halo centers. (took 0.0243858 sec) SUBFIND: SO iteration 7: need to repeat for 1805631 halo centers. (took 0.0244406 sec) SUBFIND: SO iteration 8: need to repeat for 1805631 halo centers. (took 0.0242087 sec) SUBFIND: SO iteration 9: need to repeat for 1805631 halo centers. (took 0.0242439 sec) SUBFIND: SO iteration 10: need to repeat for 1805631 halo centers. (took 0.0244872 sec) SUBFIND: SO iteration 11: need to repeat for 1805631 halo centers. (took 0.0243296 sec) SUBFIND: SO iteration 12: need to repeat for 1805631 halo centers. (took 0.0243398 sec) SUBFIND: SO iteration 13: need to repeat for 1805631 halo centers. (took 0.0243008 sec) SUBFIND: SO iteration 14: need to repeat for 1805631 halo centers. (took 0.0243592 sec) SUBFIND: SO iteration 15: need to repeat for 1805631 halo centers. (took 0.0245689 sec) SUBFIND: SO iteration 16: need to repeat for 130609 halo centers. (took 0.0237065 sec) SUBFIND: SO iteration 17: need to repeat for 1679 halo centers. (took 0.00596022 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.000365179 sec) SUBFIND: SO iteration 1: need to repeat for 1805631 halo centers. (took 0.0243473 sec) SUBFIND: SO iteration 2: need to repeat for 1805631 halo centers. (took 0.0241421 sec) SUBFIND: SO iteration 3: need to repeat for 1805631 halo centers. (took 0.0234693 sec) SUBFIND: SO iteration 4: need to repeat for 1805631 halo centers. (took 0.0238812 sec) SUBFIND: SO iteration 5: need to repeat for 1805631 halo centers. (took 0.0238979 sec) SUBFIND: SO iteration 6: need to repeat for 1805631 halo centers. (took 0.0238649 sec) SUBFIND: SO iteration 7: need to repeat for 1805631 halo centers. (took 0.0238858 sec) SUBFIND: SO iteration 8: need to repeat for 1805631 halo centers. (took 0.0238922 sec) SUBFIND: SO iteration 9: need to repeat for 1805631 halo centers. (took 0.0238883 sec) SUBFIND: SO iteration 10: need to repeat for 1805631 halo centers. (took 0.0238653 sec) SUBFIND: SO iteration 11: need to repeat for 1805631 halo centers. (took 0.0239207 sec) SUBFIND: SO iteration 12: need to repeat for 1805631 halo centers. (took 0.0239102 sec) SUBFIND: SO iteration 13: need to repeat for 1805631 halo centers. (took 0.0242498 sec) SUBFIND: SO iteration 14: need to repeat for 1805631 halo centers. (took 0.0239221 sec) SUBFIND: SO iteration 15: need to repeat for 1805631 halo centers. (took 0.0240069 sec) SUBFIND: SO iteration 16: need to repeat for 1485096 halo centers. (took 0.0239614 sec) SUBFIND: SO iteration 17: need to repeat for 120235 halo centers. (took 0.019972 sec) SUBFIND: SO iteration 18: need to repeat for 15907 halo centers. (took 0.00572619 sec) SUBFIND: determining spherical overdensity masses took 1.60893 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0985355 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.57938 sec, total size 676.356 MB, corresponds to effective I/O rate of 428.242 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.58115 sec SUBFIND: Finished with SUBFIND. (total time=120.35 sec) SUBFIND: Total number of subhalos with at least 20 particles: 1812087 SUBFIND: Largest subhalo has 75 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133993363 FOF: preparing output order of particles took 1.48145 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.29983 sec, total size 5304.86 MB, corresponds to effective I/O rate of 726.71 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 117 (rank 117 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 127 (rank 127 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 139 (rank 139 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 128 (rank 128 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.