TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186504.84 Mb (on task= 108), Smallest = 186398.78 Mb (on task= 0), Average = 186448.39 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5116.55 Mb (on task= 0), Smallest = 5010.50 Mb (on task= 108), Average = 5066.93 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5116.55 Mb (on task= 0), Smallest = 5010.50 Mb (on task= 108), Average = 5066.93 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.40 Mb (on task= 98), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 14.3091 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 62625562 (tot= 62625562) masstab= 0 READIC: Type 1: 71366751 (tot= 71366751) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 5156 (tot= 5156) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.30021 sec, total size 6372.81 MB, corresponds to effective I/O rate of 1481.98 MB/sec READIC: Total number of particles : 133997469 INIT: Testing ID uniqueness... INIT: success. took=0.0738207 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=17158, determination of top-level tree involved 5 iterations and took 0.627741 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=174 for nextra=62, reaching maximum imbalance of 1.1113|1.11172 DOMAIN: combining multiple-domains took 0.0140565 sec DOMAIN: exchange of 71371907 particles DOMAIN: particle exchange done. (took 0.390456 sec) DOMAIN: domain decomposition done. (took in total 1.0427 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0714176 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=171.535 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0896292 sec =82334.9 NTopnodes=19609 NTopleaves=17158 FOF: Start linking particles (presently allocated=195.115 MB) FOF: linking of small cells took 0.00179782 sec FOF: local links done (took 0.154719 sec, avg-work=0.136633, imbalance=1.1262). FOF: Marked=146973 out of the 71366751 primaries which are linked FOF: begin linking across processors (presently allocated=196.977 MB) FOF: have done 12042 cross links (processed 146973, took 0.006198 sec) FOF: have done 2552 cross links (processed 70094, took 0.00531539 sec) FOF: have done 449 cross links (processed 9754, took 0.00476639 sec) FOF: have done 75 cross links (processed 1485, took 0.00462087 sec) FOF: have done 17 cross links (processed 283, took 0.00438058 sec) FOF: have done 3 cross links (processed 71, took 0.00434718 sec) FOF: have done 0 cross links (processed 7, took 0.00430306 sec) FOF: Local groups found. FOF: primary group finding took = 0.200649 sec FOF: Start finding nearest dm-particle (presently allocated=195.115 MB) FOF: fof-nearest iteration 1: need to repeat for 61232030 particles. (took = 0.0922376 sec) FOF: fof-nearest iteration 2: need to repeat for 54626722 particles. (took = 0.102241 sec) FOF: fof-nearest iteration 3: need to repeat for 37162519 particles. (took = 0.110429 sec) FOF: fof-nearest iteration 4: need to repeat for 15186030 particles. (took = 0.0927667 sec) FOF: fof-nearest iteration 5: need to repeat for 2407633 particles. (took = 0.0477817 sec) FOF: fof-nearest iteration 6: need to repeat for 64959 particles. (took = 0.0125348 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.466261 sec FOF: compiling local group data and catalogue took = 0.0267441 sec FOF: Total number of FOF groups with at least 32 particles: 1539920 FOF: Largest FOF group has 88 particles. FOF: Total number of particles in FOF groups: 133997469 FOF: group properties are now allocated.. (presently allocated=177.809 MB) FOF: computation of group properties took = 0.0109405 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.104998 sec FOF: Finished computing FoF groups. Complete work took 0.961986 sec (presently allocated=172.839 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=183.107 MB) GRAVTREE: Tree construction done. took 0.30955 sec =112295 NTopnodes=19609 NTopleaves=17158 tree-build-scalability=0.825785 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133881831 particles. (took 0.866425 sec) SUBFIND: ngb iteration 2: need to repeat for 133675688 particles. (took 0.75351 sec) SUBFIND: ngb iteration 3: need to repeat for 133298270 particles. (took 0.712917 sec) SUBFIND: ngb iteration 4: need to repeat for 132557129 particles. (took 0.676633 sec) SUBFIND: ngb iteration 5: need to repeat for 131098564 particles. (took 0.657054 sec) SUBFIND: ngb iteration 6: need to repeat for 128199039 particles. (took 0.658087 sec) SUBFIND: ngb iteration 7: need to repeat for 122494428 particles. (took 0.653094 sec) SUBFIND: ngb iteration 8: need to repeat for 112144452 particles. (took 0.631939 sec) SUBFIND: ngb iteration 9: need to repeat for 97208992 particles. (took 0.577927 sec) SUBFIND: ngb iteration 10: need to repeat for 82826097 particles. (took 0.498004 sec) SUBFIND: ngb iteration 11: need to repeat for 73196981 particles. (took 0.412895 sec) SUBFIND: ngb iteration 12: need to repeat for 67952740 particles. (took 0.358467 sec) SUBFIND: ngb iteration 13: need to repeat for 65357235 particles. (took 0.332739 sec) SUBFIND: ngb iteration 14: need to repeat for 64085979 particles. (took 0.322798 sec) SUBFIND: ngb iteration 15: need to repeat for 63421229 particles. (took 0.311381 sec) SUBFIND: ngb iteration 16: need to repeat for 63028856 particles. (took 0.297623 sec) SUBFIND: ngb iteration 17: need to repeat for 62771766 particles. (took 0.281828 sec) SUBFIND: ngb iteration 18: need to repeat for 62587991 particles. (took 0.265088 sec) SUBFIND: ngb iteration 19: need to repeat for 62447257 particles. (took 0.250607 sec) SUBFIND: ngb iteration 20: need to repeat for 62324081 particles. (took 0.242526 sec) SUBFIND: ngb iteration 21: need to repeat for 62197546 particles. (took 0.239085 sec) SUBFIND: ngb iteration 22: need to repeat for 62048618 particles. (took 0.239652 sec) SUBFIND: ngb iteration 23: need to repeat for 61856728 particles. (took 0.241098 sec) SUBFIND: ngb iteration 24: need to repeat for 61601574 particles. (took 0.243911 sec) SUBFIND: ngb iteration 25: need to repeat for 61258936 particles. (took 0.248609 sec) SUBFIND: ngb iteration 26: need to repeat for 60791744 particles. (took 0.25531 sec) SUBFIND: ngb iteration 27: need to repeat for 60153476 particles. (took 0.267238 sec) SUBFIND: ngb iteration 28: need to repeat for 59284172 particles. (took 0.282008 sec) SUBFIND: ngb iteration 29: need to repeat for 58109685 particles. (took 0.302746 sec) SUBFIND: ngb iteration 30: need to repeat for 56529063 particles. (took 0.332374 sec) SUBFIND: ngb iteration 31: need to repeat for 54446374 particles. (took 0.35718 sec) SUBFIND: ngb iteration 32: need to repeat for 51728406 particles. (took 0.383184 sec) SUBFIND: ngb iteration 33: need to repeat for 48272127 particles. (took 0.395414 sec) SUBFIND: ngb iteration 34: need to repeat for 43983308 particles. (took 0.385245 sec) SUBFIND: ngb iteration 35: need to repeat for 38827209 particles. (took 0.371706 sec) SUBFIND: ngb iteration 36: need to repeat for 32906123 particles. (took 0.339213 sec) SUBFIND: ngb iteration 37: need to repeat for 26480363 particles. (took 0.301078 sec) SUBFIND: ngb iteration 38: need to repeat for 19948699 particles. (took 0.255375 sec) SUBFIND: ngb iteration 39: need to repeat for 13841048 particles. (took 0.205799 sec) SUBFIND: ngb iteration 40: need to repeat for 8693555 particles. (took 0.158099 sec) SUBFIND: ngb iteration 41: need to repeat for 4824379 particles. (took 0.113179 sec) SUBFIND: ngb iteration 42: need to repeat for 2298724 particles. (took 0.0725306 sec) SUBFIND: ngb iteration 43: need to repeat for 915651 particles. (took 0.0408151 sec) SUBFIND: ngb iteration 44: need to repeat for 290233 particles. (took 0.0190304 sec) SUBFIND: ngb iteration 45: need to repeat for 70742 particles. (took 0.00751169 sec) SUBFIND: ngb iteration 46: need to repeat for 12789 particles. (took 0.00277622 sec) SUBFIND: ngb iteration 47: need to repeat for 1609 particles. (took 0.00102237 sec) SUBFIND: ngb iteration 48: need to repeat for 175 particles. (took 0.000345513 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 15.8317 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997469 particles, for threshold size factor 0.6) SUBFIND: The other 1539920 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00451465 sec SUBFIND: particle balance=1.1113 SUBFIND: subfind_exchange() took 0.449074 sec SUBFIND: particle balance for processing=1.00011 SUBFIND: subdomain decomposition took 0.105084 sec SUBFIND: serial subfind subdomain decomposition took 0.103686 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=3565 took 84.5695 sec SUBFIND: root-task=0: Serial processing of halo 0 took 84.8249 SUBFIND: Processing overall took (total time=85.3608 sec) SUBFIND: 0 out of 9601 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516966 ALLOCATE: Changing to MaxPartSph = 241611 SUBFIND: subfind_exchange() (for return to original CPU) took 0.514843 sec TREE: Full tree construction for all particles. (presently allocated=159.52 MB) GRAVTREE: Tree construction done. took 1.53321 sec =112295 NTopnodes=19609 NTopleaves=17158 tree-build-scalability=0.825785 SUBFIND: SO iteration 1: need to repeat for 1539907 halo centers. (took 0.0270273 sec) SUBFIND: SO iteration 2: need to repeat for 1539907 halo centers. (took 0.0226474 sec) SUBFIND: SO iteration 3: need to repeat for 1539907 halo centers. (took 0.0229617 sec) SUBFIND: SO iteration 4: need to repeat for 1539907 halo centers. (took 0.0227103 sec) SUBFIND: SO iteration 5: need to repeat for 1539907 halo centers. (took 0.0225886 sec) SUBFIND: SO iteration 6: need to repeat for 1539907 halo centers. (took 0.0227786 sec) SUBFIND: SO iteration 7: need to repeat for 1539907 halo centers. (took 0.0231098 sec) SUBFIND: SO iteration 8: need to repeat for 1539907 halo centers. (took 0.0230105 sec) SUBFIND: SO iteration 9: need to repeat for 1539907 halo centers. (took 0.0225672 sec) SUBFIND: SO iteration 10: need to repeat for 1539907 halo centers. (took 0.0229257 sec) SUBFIND: SO iteration 11: need to repeat for 1539907 halo centers. (took 0.0223653 sec) SUBFIND: SO iteration 12: need to repeat for 1539907 halo centers. (took 0.0230654 sec) SUBFIND: SO iteration 13: need to repeat for 1539907 halo centers. (took 0.0224487 sec) SUBFIND: SO iteration 14: need to repeat for 1539907 halo centers. (took 0.0223712 sec) SUBFIND: SO iteration 15: need to repeat for 1539907 halo centers. (took 0.0223541 sec) SUBFIND: SO iteration 16: need to repeat for 86578 halo centers. (took 0.0219475 sec) SUBFIND: SO iteration 17: need to repeat for 1207 halo centers. (took 0.00543916 sec) SUBFIND: SO iteration 18: need to repeat for 5 halo centers. (took 0.000325002 sec) SUBFIND: SO iteration 1: need to repeat for 1539907 halo centers. (took 0.0225313 sec) SUBFIND: SO iteration 2: need to repeat for 1539907 halo centers. (took 0.0218514 sec) SUBFIND: SO iteration 3: need to repeat for 1539907 halo centers. (took 0.0224752 sec) SUBFIND: SO iteration 4: need to repeat for 1539907 halo centers. (took 0.0228093 sec) SUBFIND: SO iteration 5: need to repeat for 1539907 halo centers. (took 0.0222792 sec) SUBFIND: SO iteration 6: need to repeat for 1539907 halo centers. (took 0.0223862 sec) SUBFIND: SO iteration 7: need to repeat for 1539907 halo centers. (took 0.0224275 sec) SUBFIND: SO iteration 8: need to repeat for 1539907 halo centers. (took 0.0223524 sec) SUBFIND: SO iteration 9: need to repeat for 1539907 halo centers. (took 0.0225306 sec) SUBFIND: SO iteration 10: need to repeat for 1539907 halo centers. (took 0.022493 sec) SUBFIND: SO iteration 11: need to repeat for 1539907 halo centers. (took 0.0223403 sec) SUBFIND: SO iteration 12: need to repeat for 1539907 halo centers. (took 0.0237171 sec) SUBFIND: SO iteration 13: need to repeat for 1539907 halo centers. (took 0.0238372 sec) SUBFIND: SO iteration 14: need to repeat for 1539907 halo centers. (took 0.0227834 sec) SUBFIND: SO iteration 15: need to repeat for 1539907 halo centers. (took 0.0230034 sec) SUBFIND: SO iteration 16: need to repeat for 49075 halo centers. (took 0.0225415 sec) SUBFIND: SO iteration 17: need to repeat for 480 halo centers. (took 0.00570424 sec) SUBFIND: SO iteration 1: need to repeat for 1539907 halo centers. (took 0.0233809 sec) SUBFIND: SO iteration 2: need to repeat for 1539907 halo centers. (took 0.0238191 sec) SUBFIND: SO iteration 3: need to repeat for 1539907 halo centers. (took 0.0232357 sec) SUBFIND: SO iteration 4: need to repeat for 1539907 halo centers. (took 0.0225238 sec) SUBFIND: SO iteration 5: need to repeat for 1539907 halo centers. (took 0.0224612 sec) SUBFIND: SO iteration 6: need to repeat for 1539907 halo centers. (took 0.0223952 sec) SUBFIND: SO iteration 7: need to repeat for 1539907 halo centers. (took 0.0223983 sec) SUBFIND: SO iteration 8: need to repeat for 1539907 halo centers. (took 0.0223407 sec) SUBFIND: SO iteration 9: need to repeat for 1539907 halo centers. (took 0.0223846 sec) SUBFIND: SO iteration 10: need to repeat for 1539907 halo centers. (took 0.022341 sec) SUBFIND: SO iteration 11: need to repeat for 1539907 halo centers. (took 0.0223786 sec) SUBFIND: SO iteration 12: need to repeat for 1539907 halo centers. (took 0.0223662 sec) SUBFIND: SO iteration 13: need to repeat for 1539907 halo centers. (took 0.0223476 sec) SUBFIND: SO iteration 14: need to repeat for 1539907 halo centers. (took 0.022398 sec) SUBFIND: SO iteration 15: need to repeat for 1539907 halo centers. (took 0.0223864 sec) SUBFIND: SO iteration 16: need to repeat for 88597 halo centers. (took 0.0217135 sec) SUBFIND: SO iteration 17: need to repeat for 1239 halo centers. (took 0.0051073 sec) SUBFIND: SO iteration 18: need to repeat for 6 halo centers. (took 0.000316648 sec) SUBFIND: SO iteration 1: need to repeat for 1539907 halo centers. (took 0.0225987 sec) SUBFIND: SO iteration 2: need to repeat for 1539907 halo centers. (took 0.0223868 sec) SUBFIND: SO iteration 3: need to repeat for 1539907 halo centers. (took 0.0216399 sec) SUBFIND: SO iteration 4: need to repeat for 1539907 halo centers. (took 0.0221552 sec) SUBFIND: SO iteration 5: need to repeat for 1539907 halo centers. (took 0.0220826 sec) SUBFIND: SO iteration 6: need to repeat for 1539907 halo centers. (took 0.0221429 sec) SUBFIND: SO iteration 7: need to repeat for 1539907 halo centers. (took 0.0221044 sec) SUBFIND: SO iteration 8: need to repeat for 1539907 halo centers. (took 0.0221875 sec) SUBFIND: SO iteration 9: need to repeat for 1539907 halo centers. (took 0.0220974 sec) SUBFIND: SO iteration 10: need to repeat for 1539907 halo centers. (took 0.0221571 sec) SUBFIND: SO iteration 11: need to repeat for 1539907 halo centers. (took 0.0220743 sec) SUBFIND: SO iteration 12: need to repeat for 1539907 halo centers. (took 0.0220745 sec) SUBFIND: SO iteration 13: need to repeat for 1539907 halo centers. (took 0.0221328 sec) SUBFIND: SO iteration 14: need to repeat for 1539907 halo centers. (took 0.0221016 sec) SUBFIND: SO iteration 15: need to repeat for 1539907 halo centers. (took 0.0220974 sec) SUBFIND: SO iteration 16: need to repeat for 1183058 halo centers. (took 0.0219976 sec) SUBFIND: SO iteration 17: need to repeat for 85546 halo centers. (took 0.0177961 sec) SUBFIND: SO iteration 18: need to repeat for 6951 halo centers. (took 0.0049235 sec) SUBFIND: SO iteration 19: need to repeat for 3 halo centers. (took 0.00093917 sec) SUBFIND: determining spherical overdensity masses took 1.48976 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0932823 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.54214 sec, total size 577.647 MB, corresponds to effective I/O rate of 374.575 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.54343 sec SUBFIND: Finished with SUBFIND. (total time=107.206 sec) SUBFIND: Total number of subhalos with at least 20 particles: 1549448 SUBFIND: Largest subhalo has 88 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133995842 FOF: preparing output order of particles took 1.5057 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.33536 sec, total size 5317.13 MB, corresponds to effective I/O rate of 724.863 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 71 (rank 71 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 65 (rank 65 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 69 (rank 69 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.