TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186501.77 Mb (on task= 108), Smallest = 186405.09 Mb (on task= 0), Average = 186446.56 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5110.24 Mb (on task= 0), Smallest = 5013.57 Mb (on task= 108), Average = 5068.77 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5110.24 Mb (on task= 0), Smallest = 5013.57 Mb (on task= 108), Average = 5068.77 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.41 Mb (on task= 99), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.5448 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 63811630 (tot= 63811630) masstab= 0 READIC: Type 1: 70172364 (tot= 70172364) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 13523 (tot= 13523) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.04015 sec, total size 6377.34 MB, corresponds to effective I/O rate of 1578.49 MB/sec READIC: Total number of particles : 133997517 INIT: Testing ID uniqueness... INIT: success. took=0.0714225 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=19860, determination of top-level tree involved 5 iterations and took 0.634988 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=169 for nextra=78, reaching maximum imbalance of 1.10665|1.10688 DOMAIN: combining multiple-domains took 0.0138243 sec DOMAIN: exchange of 70185887 particles DOMAIN: particle exchange done. (took 0.362366 sec) DOMAIN: domain decomposition done. (took in total 1.02156 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.072904 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=172.471 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.157482 sec =80598.8 NTopnodes=22697 NTopleaves=19860 FOF: Start linking particles (presently allocated=192.801 MB) FOF: linking of small cells took 0.00185013 sec FOF: local links done (took 0.155601 sec, avg-work=0.138013, imbalance=1.11998). FOF: Marked=148695 out of the 70172364 primaries which are linked FOF: begin linking across processors (presently allocated=194.688 MB) FOF: have done 11304 cross links (processed 148695, took 0.00618728 sec) FOF: have done 2393 cross links (processed 70529, took 0.00532626 sec) FOF: have done 384 cross links (processed 9692, took 0.00478964 sec) FOF: have done 53 cross links (processed 1429, took 0.00444304 sec) FOF: have done 7 cross links (processed 158, took 0.00445194 sec) FOF: have done 1 cross links (processed 18, took 0.00437561 sec) FOF: have done 0 cross links (processed 2, took 0.00438972 sec) FOF: Local groups found. FOF: primary group finding took = 0.20184 sec FOF: Start finding nearest dm-particle (presently allocated=192.801 MB) FOF: fof-nearest iteration 1: need to repeat for 62126912 particles. (took = 0.0955902 sec) FOF: fof-nearest iteration 2: need to repeat for 54239042 particles. (took = 0.106992 sec) FOF: fof-nearest iteration 3: need to repeat for 34778246 particles. (took = 0.115402 sec) FOF: fof-nearest iteration 4: need to repeat for 13152225 particles. (took = 0.0915684 sec) FOF: fof-nearest iteration 5: need to repeat for 1969114 particles. (took = 0.0442204 sec) FOF: fof-nearest iteration 6: need to repeat for 54230 particles. (took = 0.0110079 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.473195 sec FOF: compiling local group data and catalogue took = 0.0264898 sec FOF: Total number of FOF groups with at least 32 particles: 1271381 FOF: Largest FOF group has 211 particles. FOF: Total number of particles in FOF groups: 133997517 FOF: group properties are now allocated.. (presently allocated=178.627 MB) FOF: computation of group properties took = 0.0103649 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.102377 sec FOF: Finished computing FoF groups. Complete work took 1.0322 sec (presently allocated=173.568 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.639 MB) GRAVTREE: Tree construction done. took 0.52953 sec =110514 NTopnodes=22697 NTopleaves=19860 tree-build-scalability=0.7951 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 132118546 particles. (took 0.824338 sec) SUBFIND: ngb iteration 2: need to repeat for 130804508 particles. (took 0.735361 sec) SUBFIND: ngb iteration 3: need to repeat for 129412014 particles. (took 0.706115 sec) SUBFIND: ngb iteration 4: need to repeat for 127743402 particles. (took 0.673728 sec) SUBFIND: ngb iteration 5: need to repeat for 125255039 particles. (took 0.651248 sec) SUBFIND: ngb iteration 6: need to repeat for 120872102 particles. (took 0.640441 sec) SUBFIND: ngb iteration 7: need to repeat for 112842501 particles. (took 0.627491 sec) SUBFIND: ngb iteration 8: need to repeat for 100356376 particles. (took 0.593105 sec) SUBFIND: ngb iteration 9: need to repeat for 86674070 particles. (took 0.530221 sec) SUBFIND: ngb iteration 10: need to repeat for 76317497 particles. (took 0.451229 sec) SUBFIND: ngb iteration 11: need to repeat for 70226046 particles. (took 0.391212 sec) SUBFIND: ngb iteration 12: need to repeat for 67127164 particles. (took 0.365659 sec) SUBFIND: ngb iteration 13: need to repeat for 65593456 particles. (took 0.360507 sec) SUBFIND: ngb iteration 14: need to repeat for 64616291 particles. (took 0.357235 sec) SUBFIND: ngb iteration 15: need to repeat for 63578219 particles. (took 0.350082 sec) SUBFIND: ngb iteration 16: need to repeat for 62272817 particles. (took 0.331481 sec) SUBFIND: ngb iteration 17: need to repeat for 61004754 particles. (took 0.305459 sec) SUBFIND: ngb iteration 18: need to repeat for 60171383 particles. (took 0.277449 sec) SUBFIND: ngb iteration 19: need to repeat for 59785822 particles. (took 0.255186 sec) SUBFIND: ngb iteration 20: need to repeat for 59613499 particles. (took 0.242554 sec) SUBFIND: ngb iteration 21: need to repeat for 59480786 particles. (took 0.237523 sec) SUBFIND: ngb iteration 22: need to repeat for 59332919 particles. (took 0.237294 sec) SUBFIND: ngb iteration 23: need to repeat for 59143497 particles. (took 0.239213 sec) SUBFIND: ngb iteration 24: need to repeat for 58895065 particles. (took 0.242783 sec) SUBFIND: ngb iteration 25: need to repeat for 58562252 particles. (took 0.248022 sec) SUBFIND: ngb iteration 26: need to repeat for 58109540 particles. (took 0.254567 sec) SUBFIND: ngb iteration 27: need to repeat for 57491912 particles. (took 0.264425 sec) SUBFIND: ngb iteration 28: need to repeat for 56649621 particles. (took 0.276863 sec) SUBFIND: ngb iteration 29: need to repeat for 55503840 particles. (took 0.292312 sec) SUBFIND: ngb iteration 30: need to repeat for 53956167 particles. (took 0.320924 sec) SUBFIND: ngb iteration 31: need to repeat for 51881306 particles. (took 0.351105 sec) SUBFIND: ngb iteration 32: need to repeat for 49174018 particles. (took 0.377342 sec) SUBFIND: ngb iteration 33: need to repeat for 45721636 particles. (took 0.393817 sec) SUBFIND: ngb iteration 34: need to repeat for 41441320 particles. (took 0.391334 sec) SUBFIND: ngb iteration 35: need to repeat for 36305736 particles. (took 0.382959 sec) SUBFIND: ngb iteration 36: need to repeat for 30428089 particles. (took 0.35118 sec) SUBFIND: ngb iteration 37: need to repeat for 24116018 particles. (took 0.307071 sec) SUBFIND: ngb iteration 38: need to repeat for 17818824 particles. (took 0.257937 sec) SUBFIND: ngb iteration 39: need to repeat for 12056898 particles. (took 0.204241 sec) SUBFIND: ngb iteration 40: need to repeat for 7319251 particles. (took 0.153505 sec) SUBFIND: ngb iteration 41: need to repeat for 3902301 particles. (took 0.10371 sec) SUBFIND: ngb iteration 42: need to repeat for 1775807 particles. (took 0.0636711 sec) SUBFIND: ngb iteration 43: need to repeat for 663858 particles. (took 0.0362328 sec) SUBFIND: ngb iteration 44: need to repeat for 195461 particles. (took 0.0178481 sec) SUBFIND: ngb iteration 45: need to repeat for 45030 particles. (took 0.0068631 sec) SUBFIND: ngb iteration 46: need to repeat for 7791 particles. (took 0.00292515 sec) SUBFIND: ngb iteration 47: need to repeat for 1059 particles. (took 0.00116607 sec) SUBFIND: ngb iteration 48: need to repeat for 118 particles. (took 0.000396876 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 15.6958 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997517 particles, for threshold size factor 0.6) SUBFIND: The other 1271381 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00517124 sec SUBFIND: particle balance=1.10646 SUBFIND: subfind_exchange() took 0.455664 sec SUBFIND: particle balance for processing=1.00067 SUBFIND: subdomain decomposition took 0.104835 sec SUBFIND: serial subfind subdomain decomposition took 0.103585 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2944 took 69.6411 sec SUBFIND: root-task=0: Serial processing of halo 0 took 69.896 SUBFIND: Processing overall took (total time=70.5289 sec) SUBFIND: 0 out of 13714 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516970 ALLOCATE: Changing to MaxPartSph = 246188 SUBFIND: subfind_exchange() (for return to original CPU) took 0.519325 sec TREE: Full tree construction for all particles. (presently allocated=160.885 MB) GRAVTREE: Tree construction done. took 1.53609 sec =110514 NTopnodes=22697 NTopleaves=19860 tree-build-scalability=0.7951 SUBFIND: SO iteration 1: need to repeat for 1271376 halo centers. (took 0.0249603 sec) SUBFIND: SO iteration 2: need to repeat for 1271376 halo centers. (took 0.0212134 sec) SUBFIND: SO iteration 3: need to repeat for 1271376 halo centers. (took 0.0231209 sec) SUBFIND: SO iteration 4: need to repeat for 1271376 halo centers. (took 0.0257355 sec) SUBFIND: SO iteration 5: need to repeat for 1271376 halo centers. (took 0.02382 sec) SUBFIND: SO iteration 6: need to repeat for 1271376 halo centers. (took 0.0207564 sec) SUBFIND: SO iteration 7: need to repeat for 1271376 halo centers. (took 0.0205766 sec) SUBFIND: SO iteration 8: need to repeat for 1271376 halo centers. (took 0.0206439 sec) SUBFIND: SO iteration 9: need to repeat for 1271376 halo centers. (took 0.0205322 sec) SUBFIND: SO iteration 10: need to repeat for 1271376 halo centers. (took 0.0210206 sec) SUBFIND: SO iteration 11: need to repeat for 1271376 halo centers. (took 0.0210045 sec) SUBFIND: SO iteration 12: need to repeat for 1271376 halo centers. (took 0.0205992 sec) SUBFIND: SO iteration 13: need to repeat for 1271376 halo centers. (took 0.0209399 sec) SUBFIND: SO iteration 14: need to repeat for 1271376 halo centers. (took 0.0206209 sec) SUBFIND: SO iteration 15: need to repeat for 1271376 halo centers. (took 0.0205021 sec) SUBFIND: SO iteration 16: need to repeat for 53437 halo centers. (took 0.0199699 sec) SUBFIND: SO iteration 17: need to repeat for 559 halo centers. (took 0.00406183 sec) SUBFIND: SO iteration 18: need to repeat for 29 halo centers. (took 0.000243396 sec) SUBFIND: SO iteration 1: need to repeat for 1271376 halo centers. (took 0.0205734 sec) SUBFIND: SO iteration 2: need to repeat for 1271376 halo centers. (took 0.0200134 sec) SUBFIND: SO iteration 3: need to repeat for 1271376 halo centers. (took 0.0204767 sec) SUBFIND: SO iteration 4: need to repeat for 1271376 halo centers. (took 0.0203793 sec) SUBFIND: SO iteration 5: need to repeat for 1271376 halo centers. (took 0.020494 sec) SUBFIND: SO iteration 6: need to repeat for 1271376 halo centers. (took 0.020472 sec) SUBFIND: SO iteration 7: need to repeat for 1271376 halo centers. (took 0.0204814 sec) SUBFIND: SO iteration 8: need to repeat for 1271376 halo centers. (took 0.0204294 sec) SUBFIND: SO iteration 9: need to repeat for 1271376 halo centers. (took 0.0204247 sec) SUBFIND: SO iteration 10: need to repeat for 1271376 halo centers. (took 0.0230296 sec) SUBFIND: SO iteration 11: need to repeat for 1271376 halo centers. (took 0.0204309 sec) SUBFIND: SO iteration 12: need to repeat for 1271376 halo centers. (took 0.0204471 sec) SUBFIND: SO iteration 13: need to repeat for 1271376 halo centers. (took 0.0216124 sec) SUBFIND: SO iteration 14: need to repeat for 1271376 halo centers. (took 0.0219381 sec) SUBFIND: SO iteration 15: need to repeat for 1271376 halo centers. (took 0.0216737 sec) SUBFIND: SO iteration 16: need to repeat for 29828 halo centers. (took 0.020174 sec) SUBFIND: SO iteration 17: need to repeat for 287 halo centers. (took 0.00299872 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000202628 sec) SUBFIND: SO iteration 1: need to repeat for 1271376 halo centers. (took 0.0206332 sec) SUBFIND: SO iteration 2: need to repeat for 1271376 halo centers. (took 0.0208049 sec) SUBFIND: SO iteration 3: need to repeat for 1271376 halo centers. (took 0.0211092 sec) SUBFIND: SO iteration 4: need to repeat for 1271376 halo centers. (took 0.0214658 sec) SUBFIND: SO iteration 5: need to repeat for 1271376 halo centers. (took 0.0204588 sec) SUBFIND: SO iteration 6: need to repeat for 1271376 halo centers. (took 0.0206806 sec) SUBFIND: SO iteration 7: need to repeat for 1271376 halo centers. (took 0.0204648 sec) SUBFIND: SO iteration 8: need to repeat for 1271376 halo centers. (took 0.0214144 sec) SUBFIND: SO iteration 9: need to repeat for 1271376 halo centers. (took 0.0211432 sec) SUBFIND: SO iteration 10: need to repeat for 1271376 halo centers. (took 0.0209217 sec) SUBFIND: SO iteration 11: need to repeat for 1271376 halo centers. (took 0.0205869 sec) SUBFIND: SO iteration 12: need to repeat for 1271376 halo centers. (took 0.0208667 sec) SUBFIND: SO iteration 13: need to repeat for 1271376 halo centers. (took 0.0214508 sec) SUBFIND: SO iteration 14: need to repeat for 1271376 halo centers. (took 0.0205027 sec) SUBFIND: SO iteration 15: need to repeat for 1271376 halo centers. (took 0.0208978 sec) SUBFIND: SO iteration 16: need to repeat for 54587 halo centers. (took 0.0200064 sec) SUBFIND: SO iteration 17: need to repeat for 567 halo centers. (took 0.00425922 sec) SUBFIND: SO iteration 18: need to repeat for 30 halo centers. (took 0.000254305 sec) SUBFIND: SO iteration 1: need to repeat for 1271376 halo centers. (took 0.0208275 sec) SUBFIND: SO iteration 2: need to repeat for 1271376 halo centers. (took 0.0210512 sec) SUBFIND: SO iteration 3: need to repeat for 1271376 halo centers. (took 0.020275 sec) SUBFIND: SO iteration 4: need to repeat for 1271376 halo centers. (took 0.0205009 sec) SUBFIND: SO iteration 5: need to repeat for 1271376 halo centers. (took 0.0206323 sec) SUBFIND: SO iteration 6: need to repeat for 1271376 halo centers. (took 0.0205343 sec) SUBFIND: SO iteration 7: need to repeat for 1271376 halo centers. (took 0.0208505 sec) SUBFIND: SO iteration 8: need to repeat for 1271376 halo centers. (took 0.0210266 sec) SUBFIND: SO iteration 9: need to repeat for 1271376 halo centers. (took 0.0207018 sec) SUBFIND: SO iteration 10: need to repeat for 1271376 halo centers. (took 0.0205698 sec) SUBFIND: SO iteration 11: need to repeat for 1271376 halo centers. (took 0.0204988 sec) SUBFIND: SO iteration 12: need to repeat for 1271376 halo centers. (took 0.0214564 sec) SUBFIND: SO iteration 13: need to repeat for 1271376 halo centers. (took 0.0205662 sec) SUBFIND: SO iteration 14: need to repeat for 1271376 halo centers. (took 0.0226725 sec) SUBFIND: SO iteration 15: need to repeat for 1271376 halo centers. (took 0.0206533 sec) SUBFIND: SO iteration 16: need to repeat for 879919 halo centers. (took 0.0204089 sec) SUBFIND: SO iteration 17: need to repeat for 57158 halo centers. (took 0.0153307 sec) SUBFIND: SO iteration 18: need to repeat for 4306 halo centers. (took 0.00414639 sec) SUBFIND: SO iteration 19: need to repeat for 2 halo centers. (took 0.000674335 sec) SUBFIND: determining spherical overdensity masses took 1.38223 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0931316 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.53795 sec, total size 478.053 MB, corresponds to effective I/O rate of 310.837 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.53912 sec SUBFIND: Finished with SUBFIND. (total time=92.3664 sec) SUBFIND: Total number of subhalos with at least 20 particles: 1284775 SUBFIND: Largest subhalo has 187 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133996991 FOF: preparing output order of particles took 1.46586 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.44578 sec, total size 5330.71 MB, corresponds to effective I/O rate of 715.936 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 36 (rank 36 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 34 (rank 34 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 40 (rank 40 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 51 (rank 51 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.