TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186492.10 Mb (on task= 189), Smallest = 186398.49 Mb (on task= 0), Average = 186444.38 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5116.85 Mb (on task= 0), Smallest = 5023.23 Mb (on task= 189), Average = 5070.95 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5116.85 Mb (on task= 0), Smallest = 5023.23 Mb (on task= 189), Average = 5070.95 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.40 Mb (on task= 86), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 14.7265 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65402107 (tot= 65402107) masstab= 0 READIC: Type 1: 68532401 (tot= 68532401) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 62895 (tot= 62895) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.59397 sec, total size 6383.4 MB, corresponds to effective I/O rate of 1389.52 MB/sec READIC: Total number of particles : 133997403 INIT: Testing ID uniqueness... INIT: success. took=0.0700626 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=18523, determination of top-level tree involved 5 iterations and took 0.626563 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=98, reaching maximum imbalance of 1.11865|1.11973 DOMAIN: combining multiple-domains took 0.0133193 sec DOMAIN: exchange of 68595296 particles DOMAIN: particle exchange done. (took 0.380323 sec) DOMAIN: domain decomposition done. (took in total 1.03089 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0743266 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.641 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.154745 sec =71233.4 NTopnodes=21169 NTopleaves=18523 FOF: Start linking particles (presently allocated=193.013 MB) FOF: linking of small cells took 0.00197521 sec FOF: local links done (took 0.162578 sec, avg-work=0.143204, imbalance=1.13034). FOF: Marked=143678 out of the 68532401 primaries which are linked FOF: begin linking across processors (presently allocated=194.865 MB) FOF: have done 9466 cross links (processed 143678, took 0.00622694 sec) FOF: have done 2228 cross links (processed 69108, took 0.00525906 sec) FOF: have done 324 cross links (processed 9188, took 0.00472032 sec) FOF: have done 68 cross links (processed 1315, took 0.0044499 sec) FOF: have done 11 cross links (processed 259, took 0.00446737 sec) FOF: have done 3 cross links (processed 35, took 0.00441483 sec) FOF: have done 0 cross links (processed 9, took 0.00436012 sec) FOF: Local groups found. FOF: primary group finding took = 0.208681 sec FOF: Start finding nearest dm-particle (presently allocated=193.013 MB) FOF: fof-nearest iteration 1: need to repeat for 63232498 particles. (took = 0.102333 sec) FOF: fof-nearest iteration 2: need to repeat for 53066800 particles. (took = 0.116739 sec) FOF: fof-nearest iteration 3: need to repeat for 30319666 particles. (took = 0.124897 sec) FOF: fof-nearest iteration 4: need to repeat for 9994125 particles. (took = 0.0884797 sec) FOF: fof-nearest iteration 5: need to repeat for 1365695 particles. (took = 0.03726 sec) FOF: fof-nearest iteration 6: need to repeat for 38274 particles. (took = 0.00901092 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.487201 sec FOF: compiling local group data and catalogue took = 0.0261444 sec FOF: Total number of FOF groups with at least 32 particles: 857806 FOF: Largest FOF group has 157 particles. FOF: Total number of particles in FOF groups: 133997403 FOF: group properties are now allocated.. (presently allocated=179.436 MB) FOF: computation of group properties took = 0.00928264 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0954357 sec FOF: Finished computing FoF groups. Complete work took 1.03544 sec (presently allocated=174.384 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.53 MB) GRAVTREE: Tree construction done. took 0.52596 sec =100694 NTopnodes=21169 NTopleaves=18523 tree-build-scalability=0.790255 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133661939 particles. (took 0.928342 sec) SUBFIND: ngb iteration 2: need to repeat for 133475699 particles. (took 0.766668 sec) SUBFIND: ngb iteration 3: need to repeat for 133309174 particles. (took 0.688297 sec) SUBFIND: ngb iteration 4: need to repeat for 133176862 particles. (took 0.6432 sec) SUBFIND: ngb iteration 5: need to repeat for 133079039 particles. (took 0.625197 sec) SUBFIND: ngb iteration 6: need to repeat for 132999690 particles. (took 0.622429 sec) SUBFIND: ngb iteration 7: need to repeat for 132928421 particles. (took 0.635308 sec) SUBFIND: ngb iteration 8: need to repeat for 132858923 particles. (took 0.657448 sec) SUBFIND: ngb iteration 9: need to repeat for 132803225 particles. (took 0.688629 sec) SUBFIND: ngb iteration 10: need to repeat for 132759248 particles. (took 0.724326 sec) SUBFIND: ngb iteration 11: need to repeat for 132533779 particles. (took 0.762883 sec) SUBFIND: ngb iteration 12: need to repeat for 129471248 particles. (took 0.802025 sec) SUBFIND: ngb iteration 13: need to repeat for 119713418 particles. (took 0.816198 sec) SUBFIND: ngb iteration 14: need to repeat for 106585532 particles. (took 0.785971 sec) SUBFIND: ngb iteration 15: need to repeat for 93032757 particles. (took 0.726686 sec) SUBFIND: ngb iteration 16: need to repeat for 80511388 particles. (took 0.65407 sec) SUBFIND: ngb iteration 17: need to repeat for 68122423 particles. (took 0.582617 sec) SUBFIND: ngb iteration 18: need to repeat for 54404725 particles. (took 0.516469 sec) SUBFIND: ngb iteration 19: need to repeat for 39119258 particles. (took 0.438805 sec) SUBFIND: ngb iteration 20: need to repeat for 24253274 particles. (took 0.342672 sec) SUBFIND: ngb iteration 21: need to repeat for 12473696 particles. (took 0.246192 sec) SUBFIND: ngb iteration 22: need to repeat for 5199045 particles. (took 0.14384 sec) SUBFIND: ngb iteration 23: need to repeat for 1776258 particles. (took 0.0693855 sec) SUBFIND: ngb iteration 24: need to repeat for 621425 particles. (took 0.0257968 sec) SUBFIND: ngb iteration 25: need to repeat for 367625 particles. (took 0.00807124 sec) SUBFIND: ngb iteration 26: need to repeat for 329090 particles. (took 0.00531024 sec) SUBFIND: ngb iteration 27: need to repeat for 320398 particles. (took 0.00478418 sec) SUBFIND: ngb iteration 28: need to repeat for 311992 particles. (took 0.00542826 sec) SUBFIND: ngb iteration 29: need to repeat for 301785 particles. (took 0.00642922 sec) SUBFIND: ngb iteration 30: need to repeat for 287126 particles. (took 0.00645698 sec) SUBFIND: ngb iteration 31: need to repeat for 269096 particles. (took 0.00587306 sec) SUBFIND: ngb iteration 32: need to repeat for 247238 particles. (took 0.00645451 sec) SUBFIND: ngb iteration 33: need to repeat for 222154 particles. (took 0.00596173 sec) SUBFIND: ngb iteration 34: need to repeat for 194804 particles. (took 0.00626386 sec) SUBFIND: ngb iteration 35: need to repeat for 162465 particles. (took 0.00590593 sec) SUBFIND: ngb iteration 36: need to repeat for 129918 particles. (took 0.00581826 sec) SUBFIND: ngb iteration 37: need to repeat for 98641 particles. (took 0.00381608 sec) SUBFIND: ngb iteration 38: need to repeat for 68612 particles. (took 0.00350541 sec) SUBFIND: ngb iteration 39: need to repeat for 42925 particles. (took 0.00293229 sec) SUBFIND: ngb iteration 40: need to repeat for 24477 particles. (took 0.00213546 sec) SUBFIND: ngb iteration 41: need to repeat for 12337 particles. (took 0.00127654 sec) SUBFIND: ngb iteration 42: need to repeat for 5544 particles. (took 0.000922911 sec) SUBFIND: ngb iteration 43: need to repeat for 2064 particles. (took 0.000780091 sec) SUBFIND: ngb iteration 44: need to repeat for 674 particles. (took 0.000672089 sec) SUBFIND: ngb iteration 45: need to repeat for 186 particles. (took 0.000511626 sec) SUBFIND: ngb iteration 46: need to repeat for 32 particles. (took 0.000375342 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 13.9918 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997403 particles, for threshold size factor 0.6) SUBFIND: The other 857806 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00293299 sec SUBFIND: particle balance=1.11767 SUBFIND: subfind_exchange() took 0.455026 sec SUBFIND: particle balance for processing=1.00017 SUBFIND: subdomain decomposition took 0.104574 sec SUBFIND: serial subfind subdomain decomposition took 0.102969 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1986 took 47.261 sec SUBFIND: root-task=0: Serial processing of halo 0 took 47.5156 SUBFIND: Processing overall took (total time=48.1289 sec) SUBFIND: 0 out of 9386 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516966 ALLOCATE: Changing to MaxPartSph = 252323 SUBFIND: subfind_exchange() (for return to original CPU) took 0.514539 sec TREE: Full tree construction for all particles. (presently allocated=161.756 MB) GRAVTREE: Tree construction done. took 1.49449 sec =100694 NTopnodes=21169 NTopleaves=18523 tree-build-scalability=0.790255 SUBFIND: SO iteration 1: need to repeat for 857806 halo centers. (took 0.0213238 sec) SUBFIND: SO iteration 2: need to repeat for 857806 halo centers. (took 0.0183285 sec) SUBFIND: SO iteration 3: need to repeat for 857806 halo centers. (took 0.0181527 sec) SUBFIND: SO iteration 4: need to repeat for 857806 halo centers. (took 0.0180187 sec) SUBFIND: SO iteration 5: need to repeat for 857806 halo centers. (took 0.017455 sec) SUBFIND: SO iteration 6: need to repeat for 857806 halo centers. (took 0.0174948 sec) SUBFIND: SO iteration 7: need to repeat for 857806 halo centers. (took 0.0176289 sec) SUBFIND: SO iteration 8: need to repeat for 857806 halo centers. (took 0.0174207 sec) SUBFIND: SO iteration 9: need to repeat for 857806 halo centers. (took 0.0177379 sec) SUBFIND: SO iteration 10: need to repeat for 857806 halo centers. (took 0.0174084 sec) SUBFIND: SO iteration 11: need to repeat for 857806 halo centers. (took 0.0174241 sec) SUBFIND: SO iteration 12: need to repeat for 857806 halo centers. (took 0.0174234 sec) SUBFIND: SO iteration 13: need to repeat for 857806 halo centers. (took 0.0174343 sec) SUBFIND: SO iteration 14: need to repeat for 857806 halo centers. (took 0.0174609 sec) SUBFIND: SO iteration 15: need to repeat for 857806 halo centers. (took 0.0174435 sec) SUBFIND: SO iteration 16: need to repeat for 19361 halo centers. (took 0.0180141 sec) SUBFIND: SO iteration 17: need to repeat for 216 halo centers. (took 0.00224048 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000175672 sec) SUBFIND: SO iteration 1: need to repeat for 857806 halo centers. (took 0.0186987 sec) SUBFIND: SO iteration 2: need to repeat for 857806 halo centers. (took 0.0168763 sec) SUBFIND: SO iteration 3: need to repeat for 857806 halo centers. (took 0.0173177 sec) SUBFIND: SO iteration 4: need to repeat for 857806 halo centers. (took 0.0173034 sec) SUBFIND: SO iteration 5: need to repeat for 857806 halo centers. (took 0.0172849 sec) SUBFIND: SO iteration 6: need to repeat for 857806 halo centers. (took 0.0174658 sec) SUBFIND: SO iteration 7: need to repeat for 857806 halo centers. (took 0.0173213 sec) SUBFIND: SO iteration 8: need to repeat for 857806 halo centers. (took 0.0172993 sec) SUBFIND: SO iteration 9: need to repeat for 857806 halo centers. (took 0.017283 sec) SUBFIND: SO iteration 10: need to repeat for 857806 halo centers. (took 0.0173513 sec) SUBFIND: SO iteration 11: need to repeat for 857806 halo centers. (took 0.0173335 sec) SUBFIND: SO iteration 12: need to repeat for 857806 halo centers. (took 0.0172754 sec) SUBFIND: SO iteration 13: need to repeat for 857806 halo centers. (took 0.0173279 sec) SUBFIND: SO iteration 14: need to repeat for 857806 halo centers. (took 0.0173428 sec) SUBFIND: SO iteration 15: need to repeat for 857806 halo centers. (took 0.0173479 sec) SUBFIND: SO iteration 16: need to repeat for 10159 halo centers. (took 0.0169408 sec) SUBFIND: SO iteration 17: need to repeat for 72 halo centers. (took 0.00138525 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000156116 sec) SUBFIND: SO iteration 1: need to repeat for 857806 halo centers. (took 0.0174059 sec) SUBFIND: SO iteration 2: need to repeat for 857806 halo centers. (took 0.0181041 sec) SUBFIND: SO iteration 3: need to repeat for 857806 halo centers. (took 0.0179776 sec) SUBFIND: SO iteration 4: need to repeat for 857806 halo centers. (took 0.0179361 sec) SUBFIND: SO iteration 5: need to repeat for 857806 halo centers. (took 0.0182897 sec) SUBFIND: SO iteration 6: need to repeat for 857806 halo centers. (took 0.0200031 sec) SUBFIND: SO iteration 7: need to repeat for 857806 halo centers. (took 0.0183047 sec) SUBFIND: SO iteration 8: need to repeat for 857806 halo centers. (took 0.018174 sec) SUBFIND: SO iteration 9: need to repeat for 857806 halo centers. (took 0.0175374 sec) SUBFIND: SO iteration 10: need to repeat for 857806 halo centers. (took 0.0197441 sec) SUBFIND: SO iteration 11: need to repeat for 857806 halo centers. (took 0.0190282 sec) SUBFIND: SO iteration 12: need to repeat for 857806 halo centers. (took 0.0187197 sec) SUBFIND: SO iteration 13: need to repeat for 857806 halo centers. (took 0.0186633 sec) SUBFIND: SO iteration 14: need to repeat for 857806 halo centers. (took 0.019933 sec) SUBFIND: SO iteration 15: need to repeat for 857806 halo centers. (took 0.0189269 sec) SUBFIND: SO iteration 16: need to repeat for 19852 halo centers. (took 0.0186469 sec) SUBFIND: SO iteration 17: need to repeat for 221 halo centers. (took 0.00235643 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000180181 sec) SUBFIND: SO iteration 1: need to repeat for 857806 halo centers. (took 0.018883 sec) SUBFIND: SO iteration 2: need to repeat for 857806 halo centers. (took 0.0191893 sec) SUBFIND: SO iteration 3: need to repeat for 857806 halo centers. (took 0.0180817 sec) SUBFIND: SO iteration 4: need to repeat for 857806 halo centers. (took 0.0183257 sec) SUBFIND: SO iteration 5: need to repeat for 857806 halo centers. (took 0.0184073 sec) SUBFIND: SO iteration 6: need to repeat for 857806 halo centers. (took 0.0179834 sec) SUBFIND: SO iteration 7: need to repeat for 857806 halo centers. (took 0.0180956 sec) SUBFIND: SO iteration 8: need to repeat for 857806 halo centers. (took 0.0180474 sec) SUBFIND: SO iteration 9: need to repeat for 857806 halo centers. (took 0.0179719 sec) SUBFIND: SO iteration 10: need to repeat for 857806 halo centers. (took 0.0179868 sec) SUBFIND: SO iteration 11: need to repeat for 857806 halo centers. (took 0.0179602 sec) SUBFIND: SO iteration 12: need to repeat for 857806 halo centers. (took 0.0180273 sec) SUBFIND: SO iteration 13: need to repeat for 857806 halo centers. (took 0.0180121 sec) SUBFIND: SO iteration 14: need to repeat for 857806 halo centers. (took 0.0179848 sec) SUBFIND: SO iteration 15: need to repeat for 857806 halo centers. (took 0.0180075 sec) SUBFIND: SO iteration 16: need to repeat for 484630 halo centers. (took 0.0182232 sec) SUBFIND: SO iteration 17: need to repeat for 21031 halo centers. (took 0.0123525 sec) SUBFIND: SO iteration 18: need to repeat for 733 halo centers. (took 0.00223084 sec) SUBFIND: determining spherical overdensity masses took 1.17725 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0851089 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.44809 sec, total size 322.603 MB, corresponds to effective I/O rate of 222.778 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.44908 sec SUBFIND: Finished with SUBFIND. (total time=67.9042 sec) SUBFIND: Total number of subhalos with at least 20 particles: 867130 SUBFIND: Largest subhalo has 157 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997283 FOF: preparing output order of particles took 1.4571 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.30672 sec, total size 5348.9 MB, corresponds to effective I/O rate of 643.925 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 358 (rank 358 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 339 (rank 339 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 362 (rank 362 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 382 (rank 382 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.