TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186491.98 Mb (on task= 189), Smallest = 186388.80 Mb (on task= 0), Average = 186450.11 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5126.53 Mb (on task= 0), Smallest = 5023.36 Mb (on task= 189), Average = 5065.22 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5126.53 Mb (on task= 0), Smallest = 5023.36 Mb (on task= 189), Average = 5065.22 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.41 Mb (on task= 103), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.6886 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65501981 (tot= 65501981) masstab= 0 READIC: Type 1: 68421803 (tot= 68421803) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 73618 (tot= 73618) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.37372 sec, total size 6383.78 MB, corresponds to effective I/O rate of 1459.58 MB/sec READIC: Total number of particles : 133997402 INIT: Testing ID uniqueness... INIT: success. took=0.0710837 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=18964, determination of top-level tree involved 5 iterations and took 0.626965 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=174 for nextra=62, reaching maximum imbalance of 1.11129|1.11172 DOMAIN: combining multiple-domains took 0.0135386 sec DOMAIN: exchange of 68495421 particles DOMAIN: particle exchange done. (took 0.362362 sec) DOMAIN: domain decomposition done. (took in total 1.01329 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.072671 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.724 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.155212 sec =70958.5 NTopnodes=21673 NTopleaves=18964 FOF: Start linking particles (presently allocated=192.744 MB) FOF: linking of small cells took 0.00198064 sec FOF: local links done (took 0.161761 sec, avg-work=0.1442, imbalance=1.11508). FOF: Marked=145641 out of the 68421803 primaries which are linked FOF: begin linking across processors (presently allocated=194.564 MB) FOF: have done 9349 cross links (processed 145641, took 0.00608722 sec) FOF: have done 2041 cross links (processed 68048, took 0.00520954 sec) FOF: have done 324 cross links (processed 8623, took 0.00464256 sec) FOF: have done 49 cross links (processed 1397, took 0.00452698 sec) FOF: have done 4 cross links (processed 240, took 0.00433375 sec) FOF: have done 1 cross links (processed 33, took 0.00434779 sec) FOF: have done 0 cross links (processed 9, took 0.00436098 sec) FOF: Local groups found. FOF: primary group finding took = 0.207481 sec FOF: Start finding nearest dm-particle (presently allocated=192.744 MB) FOF: fof-nearest iteration 1: need to repeat for 63292716 particles. (took = 0.102237 sec) FOF: fof-nearest iteration 2: need to repeat for 52934943 particles. (took = 0.116538 sec) FOF: fof-nearest iteration 3: need to repeat for 29912083 particles. (took = 0.124727 sec) FOF: fof-nearest iteration 4: need to repeat for 9719756 particles. (took = 0.088395 sec) FOF: fof-nearest iteration 5: need to repeat for 1313693 particles. (took = 0.0369792 sec) FOF: fof-nearest iteration 6: need to repeat for 37133 particles. (took = 0.00867909 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.485956 sec FOF: compiling local group data and catalogue took = 0.026069 sec FOF: Total number of FOF groups with at least 32 particles: 817744 FOF: Largest FOF group has 165 particles. FOF: Total number of particles in FOF groups: 133997402 FOF: group properties are now allocated.. (presently allocated=179.374 MB) FOF: computation of group properties took = 0.00947799 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0916725 sec FOF: Finished computing FoF groups. Complete work took 1.03005 sec (presently allocated=174.421 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.432 MB) GRAVTREE: Tree construction done. took 0.530226 sec =100333 NTopnodes=21673 NTopleaves=18964 tree-build-scalability=0.784489 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133867026 particles. (took 0.914733 sec) SUBFIND: ngb iteration 2: need to repeat for 133793560 particles. (took 0.764329 sec) SUBFIND: ngb iteration 3: need to repeat for 133726984 particles. (took 0.682918 sec) SUBFIND: ngb iteration 4: need to repeat for 133673543 particles. (took 0.644121 sec) SUBFIND: ngb iteration 5: need to repeat for 133633170 particles. (took 0.623493 sec) SUBFIND: ngb iteration 6: need to repeat for 133601010 particles. (took 0.625257 sec) SUBFIND: ngb iteration 7: need to repeat for 133569717 particles. (took 0.638151 sec) SUBFIND: ngb iteration 8: need to repeat for 133539818 particles. (took 0.663432 sec) SUBFIND: ngb iteration 9: need to repeat for 133513816 particles. (took 0.695827 sec) SUBFIND: ngb iteration 10: need to repeat for 133490675 particles. (took 0.730745 sec) SUBFIND: ngb iteration 11: need to repeat for 133144644 particles. (took 0.770378 sec) SUBFIND: ngb iteration 12: need to repeat for 129127599 particles. (took 0.80746 sec) SUBFIND: ngb iteration 13: need to repeat for 119046222 particles. (took 0.818959 sec) SUBFIND: ngb iteration 14: need to repeat for 106135578 particles. (took 0.79374 sec) SUBFIND: ngb iteration 15: need to repeat for 93210400 particles. (took 0.740613 sec) SUBFIND: ngb iteration 16: need to repeat for 81529053 particles. (took 0.674766 sec) SUBFIND: ngb iteration 17: need to repeat for 70166472 particles. (took 0.605539 sec) SUBFIND: ngb iteration 18: need to repeat for 57615675 particles. (took 0.537837 sec) SUBFIND: ngb iteration 19: need to repeat for 43188318 particles. (took 0.477071 sec) SUBFIND: ngb iteration 20: need to repeat for 28255235 particles. (took 0.394495 sec) SUBFIND: ngb iteration 21: need to repeat for 15468643 particles. (took 0.293591 sec) SUBFIND: ngb iteration 22: need to repeat for 6801570 particles. (took 0.186786 sec) SUBFIND: ngb iteration 23: need to repeat for 2326705 particles. (took 0.0976383 sec) SUBFIND: ngb iteration 24: need to repeat for 646455 particles. (took 0.0395812 sec) SUBFIND: ngb iteration 25: need to repeat for 236231 particles. (took 0.0121883 sec) SUBFIND: ngb iteration 26: need to repeat for 173859 particles. (took 0.00393908 sec) SUBFIND: ngb iteration 27: need to repeat for 165933 particles. (took 0.00317584 sec) SUBFIND: ngb iteration 28: need to repeat for 161981 particles. (took 0.003103 sec) SUBFIND: ngb iteration 29: need to repeat for 156308 particles. (took 0.00346422 sec) SUBFIND: ngb iteration 30: need to repeat for 149187 particles. (took 0.00394823 sec) SUBFIND: ngb iteration 31: need to repeat for 140648 particles. (took 0.00485376 sec) SUBFIND: ngb iteration 32: need to repeat for 129990 particles. (took 0.00495019 sec) SUBFIND: ngb iteration 33: need to repeat for 117483 particles. (took 0.00528206 sec) SUBFIND: ngb iteration 34: need to repeat for 102886 particles. (took 0.00614169 sec) SUBFIND: ngb iteration 35: need to repeat for 86957 particles. (took 0.00431482 sec) SUBFIND: ngb iteration 36: need to repeat for 69723 particles. (took 0.00399082 sec) SUBFIND: ngb iteration 37: need to repeat for 51996 particles. (took 0.00282825 sec) SUBFIND: ngb iteration 38: need to repeat for 37224 particles. (took 0.00231186 sec) SUBFIND: ngb iteration 39: need to repeat for 23878 particles. (took 0.00192204 sec) SUBFIND: ngb iteration 40: need to repeat for 13724 particles. (took 0.0014809 sec) SUBFIND: ngb iteration 41: need to repeat for 6621 particles. (took 0.00129474 sec) SUBFIND: ngb iteration 42: need to repeat for 3056 particles. (took 0.00102463 sec) SUBFIND: ngb iteration 43: need to repeat for 1070 particles. (took 0.000810608 sec) SUBFIND: ngb iteration 44: need to repeat for 160 particles. (took 0.000573022 sec) SUBFIND: ngb iteration 45: need to repeat for 77 particles. (took 0.000455162 sec) SUBFIND: ngb iteration 46: need to repeat for 19 particles. (took 0.000364225 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 14.3021 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997402 particles, for threshold size factor 0.6) SUBFIND: The other 817744 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00286001 sec SUBFIND: particle balance=1.11085 SUBFIND: subfind_exchange() took 0.457951 sec SUBFIND: particle balance for processing=1.00004 SUBFIND: subdomain decomposition took 0.104136 sec SUBFIND: serial subfind subdomain decomposition took 0.103424 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1893 took 45.0436 sec SUBFIND: root-task=0: Serial processing of halo 0 took 45.2967 SUBFIND: Processing overall took (total time=45.8695 sec) SUBFIND: 0 out of 12052 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516966 ALLOCATE: Changing to MaxPartSph = 252708 SUBFIND: subfind_exchange() (for return to original CPU) took 0.515174 sec TREE: Full tree construction for all particles. (presently allocated=161.164 MB) GRAVTREE: Tree construction done. took 1.5098 sec =100333 NTopnodes=21673 NTopleaves=18964 tree-build-scalability=0.784489 SUBFIND: SO iteration 1: need to repeat for 817742 halo centers. (took 0.0205853 sec) SUBFIND: SO iteration 2: need to repeat for 817742 halo centers. (took 0.0178954 sec) SUBFIND: SO iteration 3: need to repeat for 817742 halo centers. (took 0.017759 sec) SUBFIND: SO iteration 4: need to repeat for 817742 halo centers. (took 0.0173531 sec) SUBFIND: SO iteration 5: need to repeat for 817742 halo centers. (took 0.0176594 sec) SUBFIND: SO iteration 6: need to repeat for 817742 halo centers. (took 0.0171118 sec) SUBFIND: SO iteration 7: need to repeat for 817742 halo centers. (took 0.0171083 sec) SUBFIND: SO iteration 8: need to repeat for 817742 halo centers. (took 0.0170499 sec) SUBFIND: SO iteration 9: need to repeat for 817742 halo centers. (took 0.017014 sec) SUBFIND: SO iteration 10: need to repeat for 817742 halo centers. (took 0.0170709 sec) SUBFIND: SO iteration 11: need to repeat for 817742 halo centers. (took 0.0169933 sec) SUBFIND: SO iteration 12: need to repeat for 817742 halo centers. (took 0.0171121 sec) SUBFIND: SO iteration 13: need to repeat for 817742 halo centers. (took 0.0171224 sec) SUBFIND: SO iteration 14: need to repeat for 817742 halo centers. (took 0.0170047 sec) SUBFIND: SO iteration 15: need to repeat for 817742 halo centers. (took 0.0171234 sec) SUBFIND: SO iteration 16: need to repeat for 16890 halo centers. (took 0.0167813 sec) SUBFIND: SO iteration 17: need to repeat for 211 halo centers. (took 0.00198569 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000182578 sec) SUBFIND: SO iteration 1: need to repeat for 817742 halo centers. (took 0.0170522 sec) SUBFIND: SO iteration 2: need to repeat for 817742 halo centers. (took 0.0165012 sec) SUBFIND: SO iteration 3: need to repeat for 817742 halo centers. (took 0.0169231 sec) SUBFIND: SO iteration 4: need to repeat for 817742 halo centers. (took 0.0168777 sec) SUBFIND: SO iteration 5: need to repeat for 817742 halo centers. (took 0.0168807 sec) SUBFIND: SO iteration 6: need to repeat for 817742 halo centers. (took 0.0169667 sec) SUBFIND: SO iteration 7: need to repeat for 817742 halo centers. (took 0.0170122 sec) SUBFIND: SO iteration 8: need to repeat for 817742 halo centers. (took 0.0183734 sec) SUBFIND: SO iteration 9: need to repeat for 817742 halo centers. (took 0.0183612 sec) SUBFIND: SO iteration 10: need to repeat for 817742 halo centers. (took 0.0216762 sec) SUBFIND: SO iteration 11: need to repeat for 817742 halo centers. (took 0.016981 sec) SUBFIND: SO iteration 12: need to repeat for 817742 halo centers. (took 0.016925 sec) SUBFIND: SO iteration 13: need to repeat for 817742 halo centers. (took 0.0169851 sec) SUBFIND: SO iteration 14: need to repeat for 817742 halo centers. (took 0.017251 sec) SUBFIND: SO iteration 15: need to repeat for 817742 halo centers. (took 0.0171287 sec) SUBFIND: SO iteration 16: need to repeat for 8741 halo centers. (took 0.0166471 sec) SUBFIND: SO iteration 17: need to repeat for 73 halo centers. (took 0.00131528 sec) SUBFIND: SO iteration 1: need to repeat for 817742 halo centers. (took 0.017768 sec) SUBFIND: SO iteration 2: need to repeat for 817742 halo centers. (took 0.017735 sec) SUBFIND: SO iteration 3: need to repeat for 817742 halo centers. (took 0.0178221 sec) SUBFIND: SO iteration 4: need to repeat for 817742 halo centers. (took 0.0175541 sec) SUBFIND: SO iteration 5: need to repeat for 817742 halo centers. (took 0.0171777 sec) SUBFIND: SO iteration 6: need to repeat for 817742 halo centers. (took 0.0170746 sec) SUBFIND: SO iteration 7: need to repeat for 817742 halo centers. (took 0.0172457 sec) SUBFIND: SO iteration 8: need to repeat for 817742 halo centers. (took 0.0170388 sec) SUBFIND: SO iteration 9: need to repeat for 817742 halo centers. (took 0.0169747 sec) SUBFIND: SO iteration 10: need to repeat for 817742 halo centers. (took 0.0170603 sec) SUBFIND: SO iteration 11: need to repeat for 817742 halo centers. (took 0.0170677 sec) SUBFIND: SO iteration 12: need to repeat for 817742 halo centers. (took 0.0169772 sec) SUBFIND: SO iteration 13: need to repeat for 817742 halo centers. (took 0.0174481 sec) SUBFIND: SO iteration 14: need to repeat for 817742 halo centers. (took 0.0169502 sec) SUBFIND: SO iteration 15: need to repeat for 817742 halo centers. (took 0.0191005 sec) SUBFIND: SO iteration 16: need to repeat for 17311 halo centers. (took 0.0166479 sec) SUBFIND: SO iteration 17: need to repeat for 215 halo centers. (took 0.00214668 sec) SUBFIND: SO iteration 18: need to repeat for 4 halo centers. (took 0.000185017 sec) SUBFIND: SO iteration 1: need to repeat for 817742 halo centers. (took 0.0172645 sec) SUBFIND: SO iteration 2: need to repeat for 817742 halo centers. (took 0.0179461 sec) SUBFIND: SO iteration 3: need to repeat for 817742 halo centers. (took 0.0172023 sec) SUBFIND: SO iteration 4: need to repeat for 817742 halo centers. (took 0.018187 sec) SUBFIND: SO iteration 5: need to repeat for 817742 halo centers. (took 0.0223512 sec) SUBFIND: SO iteration 6: need to repeat for 817742 halo centers. (took 0.0202874 sec) SUBFIND: SO iteration 7: need to repeat for 817742 halo centers. (took 0.021598 sec) SUBFIND: SO iteration 8: need to repeat for 817742 halo centers. (took 0.0218189 sec) SUBFIND: SO iteration 9: need to repeat for 817742 halo centers. (took 0.0176245 sec) SUBFIND: SO iteration 10: need to repeat for 817742 halo centers. (took 0.0176352 sec) SUBFIND: SO iteration 11: need to repeat for 817742 halo centers. (took 0.0176464 sec) SUBFIND: SO iteration 12: need to repeat for 817742 halo centers. (took 0.0176347 sec) SUBFIND: SO iteration 13: need to repeat for 817742 halo centers. (took 0.0177739 sec) SUBFIND: SO iteration 14: need to repeat for 817742 halo centers. (took 0.0180073 sec) SUBFIND: SO iteration 15: need to repeat for 817742 halo centers. (took 0.0178558 sec) SUBFIND: SO iteration 16: need to repeat for 454261 halo centers. (took 0.0176255 sec) SUBFIND: SO iteration 17: need to repeat for 18598 halo centers. (took 0.0119633 sec) SUBFIND: SO iteration 18: need to repeat for 628 halo centers. (took 0.00212254 sec) SUBFIND: determining spherical overdensity masses took 1.15687 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0917393 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.53856 sec, total size 308.176 MB, corresponds to effective I/O rate of 200.302 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.53966 sec SUBFIND: Finished with SUBFIND. (total time=66.0483 sec) SUBFIND: Total number of subhalos with at least 20 particles: 829735 SUBFIND: Largest subhalo has 165 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997075 FOF: preparing output order of particles took 1.41524 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.26823 sec, total size 5350.05 MB, corresponds to effective I/O rate of 736.087 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 253 (rank 253 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 256 (rank 256 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 271 (rank 271 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.