TACC: Starting up job 4242144 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186492.96 Mb (on task= 108), Smallest = 186404.50 Mb (on task= 0), Average = 186448.35 Mb Total Mem: Largest = 191515.34 Mb (on task= 0), Smallest = 191515.20 Mb (on task= 81), Average = 191515.32 Mb Committed_AS: Largest = 5110.84 Mb (on task= 0), Smallest = 5022.38 Mb (on task= 108), Average = 5066.97 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5110.84 Mb (on task= 0), Smallest = 5022.38 Mb (on task= 108), Average = 5066.97 Mb avail /dev/shm: Largest = 95321.53 Mb (on task= 297), Smallest = 95321.39 Mb (on task= 86), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c101-083.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.3976 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65562573 (tot= 65562573) masstab= 0 READIC: Type 1: 68354380 (tot= 68354380) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 80562 (tot= 80562) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.2816 sec, total size 6384.02 MB, corresponds to effective I/O rate of 1491.04 MB/sec READIC: Total number of particles : 133997515 INIT: Testing ID uniqueness... INIT: success. took=0.071752 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=18964, determination of top-level tree involved 5 iterations and took 0.628468 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=174 for nextra=62, reaching maximum imbalance of 1.11096|1.11172 DOMAIN: combining multiple-domains took 0.0163702 sec DOMAIN: exchange of 68434942 particles DOMAIN: particle exchange done. (took 0.363334 sec) DOMAIN: domain decomposition done. (took in total 1.01885 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0734062 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.77 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.153544 sec =70441.8 NTopnodes=21673 NTopleaves=18964 FOF: Start linking particles (presently allocated=192.877 MB) FOF: linking of small cells took 0.00181446 sec FOF: local links done (took 0.161668 sec, avg-work=0.144802, imbalance=1.10781). FOF: Marked=145060 out of the 68354380 primaries which are linked FOF: begin linking across processors (presently allocated=194.717 MB) FOF: have done 9302 cross links (processed 145060, took 0.00612583 sec) FOF: have done 2226 cross links (processed 69345, took 0.00522858 sec) FOF: have done 365 cross links (processed 9625, took 0.0046544 sec) FOF: have done 66 cross links (processed 1651, took 0.00444281 sec) FOF: have done 10 cross links (processed 242, took 0.00436744 sec) FOF: have done 2 cross links (processed 34, took 0.00437884 sec) FOF: have done 0 cross links (processed 5, took 0.00436922 sec) FOF: Local groups found. FOF: primary group finding took = 0.207316 sec FOF: Start finding nearest dm-particle (presently allocated=192.877 MB) FOF: fof-nearest iteration 1: need to repeat for 63330990 particles. (took = 0.104132 sec) FOF: fof-nearest iteration 2: need to repeat for 52848229 particles. (took = 0.119694 sec) FOF: fof-nearest iteration 3: need to repeat for 29665718 particles. (took = 0.127623 sec) FOF: fof-nearest iteration 4: need to repeat for 9556212 particles. (took = 0.087731 sec) FOF: fof-nearest iteration 5: need to repeat for 1281652 particles. (took = 0.035978 sec) FOF: fof-nearest iteration 6: need to repeat for 35877 particles. (took = 0.00856626 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.492215 sec FOF: compiling local group data and catalogue took = 0.0259565 sec FOF: Total number of FOF groups with at least 32 particles: 792595 FOF: Largest FOF group has 170 particles. FOF: Total number of particles in FOF groups: 133997515 FOF: group properties are now allocated.. (presently allocated=179.48 MB) FOF: computation of group properties took = 0.0092112 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0943857 sec FOF: Finished computing FoF groups. Complete work took 1.0394 sec (presently allocated=174.453 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.409 MB) GRAVTREE: Tree construction done. took 0.524256 sec =99768.2 NTopnodes=21673 NTopleaves=18964 tree-build-scalability=0.783269 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133924913 particles. (took 0.921782 sec) SUBFIND: ngb iteration 2: need to repeat for 133883315 particles. (took 0.775628 sec) SUBFIND: ngb iteration 3: need to repeat for 133846797 particles. (took 0.69658 sec) SUBFIND: ngb iteration 4: need to repeat for 133818325 particles. (took 0.659398 sec) SUBFIND: ngb iteration 5: need to repeat for 133795763 particles. (took 0.64887 sec) SUBFIND: ngb iteration 6: need to repeat for 133777861 particles. (took 0.647931 sec) SUBFIND: ngb iteration 7: need to repeat for 133760737 particles. (took 0.665068 sec) SUBFIND: ngb iteration 8: need to repeat for 133743408 particles. (took 0.690438 sec) SUBFIND: ngb iteration 9: need to repeat for 133728224 particles. (took 0.724169 sec) SUBFIND: ngb iteration 10: need to repeat for 133709001 particles. (took 0.762716 sec) SUBFIND: ngb iteration 11: need to repeat for 133253346 particles. (took 0.804615 sec) SUBFIND: ngb iteration 12: need to repeat for 128607977 particles. (took 0.842805 sec) SUBFIND: ngb iteration 13: need to repeat for 118460378 particles. (took 0.840951 sec) SUBFIND: ngb iteration 14: need to repeat for 105682258 particles. (took 0.803096 sec) SUBFIND: ngb iteration 15: need to repeat for 93060558 particles. (took 0.74367 sec) SUBFIND: ngb iteration 16: need to repeat for 81779667 particles. (took 0.680443 sec) SUBFIND: ngb iteration 17: need to repeat for 70895481 particles. (took 0.621881 sec) SUBFIND: ngb iteration 18: need to repeat for 58966983 particles. (took 0.569838 sec) SUBFIND: ngb iteration 19: need to repeat for 45111719 particles. (took 0.508296 sec) SUBFIND: ngb iteration 20: need to repeat for 30284230 particles. (took 0.419539 sec) SUBFIND: ngb iteration 21: need to repeat for 17131650 particles. (took 0.31187 sec) SUBFIND: ngb iteration 22: need to repeat for 7764963 particles. (took 0.202279 sec) SUBFIND: ngb iteration 23: need to repeat for 2718823 particles. (took 0.108381 sec) SUBFIND: ngb iteration 24: need to repeat for 721902 particles. (took 0.0483553 sec) SUBFIND: ngb iteration 25: need to repeat for 194324 particles. (took 0.0176092 sec) SUBFIND: ngb iteration 26: need to repeat for 105622 particles. (took 0.00478687 sec) SUBFIND: ngb iteration 27: need to repeat for 95323 particles. (took 0.00286021 sec) SUBFIND: ngb iteration 28: need to repeat for 92804 particles. (took 0.00272012 sec) SUBFIND: ngb iteration 29: need to repeat for 89991 particles. (took 0.00302531 sec) SUBFIND: ngb iteration 30: need to repeat for 86247 particles. (took 0.00298593 sec) SUBFIND: ngb iteration 31: need to repeat for 80664 particles. (took 0.00324246 sec) SUBFIND: ngb iteration 32: need to repeat for 74946 particles. (took 0.00309447 sec) SUBFIND: ngb iteration 33: need to repeat for 67593 particles. (took 0.00334285 sec) SUBFIND: ngb iteration 34: need to repeat for 60021 particles. (took 0.00374897 sec) SUBFIND: ngb iteration 35: need to repeat for 50571 particles. (took 0.00293532 sec) SUBFIND: ngb iteration 36: need to repeat for 39693 particles. (took 0.00240869 sec) SUBFIND: ngb iteration 37: need to repeat for 29956 particles. (took 0.002728 sec) SUBFIND: ngb iteration 38: need to repeat for 21150 particles. (took 0.00209563 sec) SUBFIND: ngb iteration 39: need to repeat for 13632 particles. (took 0.00156469 sec) SUBFIND: ngb iteration 40: need to repeat for 7378 particles. (took 0.00130266 sec) SUBFIND: ngb iteration 41: need to repeat for 3356 particles. (took 0.00113269 sec) SUBFIND: ngb iteration 42: need to repeat for 1252 particles. (took 0.000899805 sec) SUBFIND: ngb iteration 43: need to repeat for 477 particles. (took 0.000757713 sec) SUBFIND: ngb iteration 44: need to repeat for 142 particles. (took 0.000563551 sec) SUBFIND: ngb iteration 45: need to repeat for 57 particles. (took 0.000442779 sec) SUBFIND: ngb iteration 46: need to repeat for 35 particles. (took 0.000341104 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 14.7715 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997515 particles, for threshold size factor 0.6) SUBFIND: The other 792595 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00280304 sec SUBFIND: particle balance=1.11003 SUBFIND: subfind_exchange() took 0.453397 sec SUBFIND: particle balance for processing=1.00016 SUBFIND: subdomain decomposition took 0.105254 sec SUBFIND: serial subfind subdomain decomposition took 0.103158 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1835 took 43.6481 sec SUBFIND: root-task=0: Serial processing of halo 0 took 43.9036 SUBFIND: Processing overall took (total time=44.715 sec) SUBFIND: 0 out of 14251 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 252943 SUBFIND: subfind_exchange() (for return to original CPU) took 0.516066 sec TREE: Full tree construction for all particles. (presently allocated=161.677 MB) GRAVTREE: Tree construction done. took 1.50512 sec =99768.2 NTopnodes=21673 NTopleaves=18964 tree-build-scalability=0.783269 SUBFIND: SO iteration 1: need to repeat for 792595 halo centers. (took 0.0201777 sec) SUBFIND: SO iteration 2: need to repeat for 792595 halo centers. (took 0.0177647 sec) SUBFIND: SO iteration 3: need to repeat for 792595 halo centers. (took 0.0178119 sec) SUBFIND: SO iteration 4: need to repeat for 792595 halo centers. (took 0.0170828 sec) SUBFIND: SO iteration 5: need to repeat for 792595 halo centers. (took 0.0169515 sec) SUBFIND: SO iteration 6: need to repeat for 792595 halo centers. (took 0.0168649 sec) SUBFIND: SO iteration 7: need to repeat for 792595 halo centers. (took 0.0168448 sec) SUBFIND: SO iteration 8: need to repeat for 792595 halo centers. (took 0.0168159 sec) SUBFIND: SO iteration 9: need to repeat for 792595 halo centers. (took 0.0170104 sec) SUBFIND: SO iteration 10: need to repeat for 792595 halo centers. (took 0.0168908 sec) SUBFIND: SO iteration 11: need to repeat for 792595 halo centers. (took 0.0169562 sec) SUBFIND: SO iteration 12: need to repeat for 792595 halo centers. (took 0.0169219 sec) SUBFIND: SO iteration 13: need to repeat for 792595 halo centers. (took 0.0168341 sec) SUBFIND: SO iteration 14: need to repeat for 792595 halo centers. (took 0.0168143 sec) SUBFIND: SO iteration 15: need to repeat for 792595 halo centers. (took 0.0168192 sec) SUBFIND: SO iteration 16: need to repeat for 15549 halo centers. (took 0.0165054 sec) SUBFIND: SO iteration 17: need to repeat for 165 halo centers. (took 0.00204243 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000171212 sec) SUBFIND: SO iteration 1: need to repeat for 792595 halo centers. (took 0.0169141 sec) SUBFIND: SO iteration 2: need to repeat for 792595 halo centers. (took 0.0163544 sec) SUBFIND: SO iteration 3: need to repeat for 792595 halo centers. (took 0.0167512 sec) SUBFIND: SO iteration 4: need to repeat for 792595 halo centers. (took 0.0167618 sec) SUBFIND: SO iteration 5: need to repeat for 792595 halo centers. (took 0.0167336 sec) SUBFIND: SO iteration 6: need to repeat for 792595 halo centers. (took 0.0167729 sec) SUBFIND: SO iteration 7: need to repeat for 792595 halo centers. (took 0.0168703 sec) SUBFIND: SO iteration 8: need to repeat for 792595 halo centers. (took 0.0168169 sec) SUBFIND: SO iteration 9: need to repeat for 792595 halo centers. (took 0.016742 sec) SUBFIND: SO iteration 10: need to repeat for 792595 halo centers. (took 0.0168237 sec) SUBFIND: SO iteration 11: need to repeat for 792595 halo centers. (took 0.016809 sec) SUBFIND: SO iteration 12: need to repeat for 792595 halo centers. (took 0.0172393 sec) SUBFIND: SO iteration 13: need to repeat for 792595 halo centers. (took 0.0167306 sec) SUBFIND: SO iteration 14: need to repeat for 792595 halo centers. (took 0.0169195 sec) SUBFIND: SO iteration 15: need to repeat for 792595 halo centers. (took 0.0166622 sec) SUBFIND: SO iteration 16: need to repeat for 8048 halo centers. (took 0.0163724 sec) SUBFIND: SO iteration 17: need to repeat for 67 halo centers. (took 0.00139883 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000144919 sec) SUBFIND: SO iteration 1: need to repeat for 792595 halo centers. (took 0.0170339 sec) SUBFIND: SO iteration 2: need to repeat for 792595 halo centers. (took 0.0181511 sec) SUBFIND: SO iteration 3: need to repeat for 792595 halo centers. (took 0.0178333 sec) SUBFIND: SO iteration 4: need to repeat for 792595 halo centers. (took 0.0179284 sec) SUBFIND: SO iteration 5: need to repeat for 792595 halo centers. (took 0.0176831 sec) SUBFIND: SO iteration 6: need to repeat for 792595 halo centers. (took 0.0180814 sec) SUBFIND: SO iteration 7: need to repeat for 792595 halo centers. (took 0.017941 sec) SUBFIND: SO iteration 8: need to repeat for 792595 halo centers. (took 0.0173807 sec) SUBFIND: SO iteration 9: need to repeat for 792595 halo centers. (took 0.0173098 sec) SUBFIND: SO iteration 10: need to repeat for 792595 halo centers. (took 0.0170129 sec) SUBFIND: SO iteration 11: need to repeat for 792595 halo centers. (took 0.0176187 sec) SUBFIND: SO iteration 12: need to repeat for 792595 halo centers. (took 0.0175519 sec) SUBFIND: SO iteration 13: need to repeat for 792595 halo centers. (took 0.0172919 sec) SUBFIND: SO iteration 14: need to repeat for 792595 halo centers. (took 0.017021 sec) SUBFIND: SO iteration 15: need to repeat for 792595 halo centers. (took 0.017056 sec) SUBFIND: SO iteration 16: need to repeat for 16010 halo centers. (took 0.0167207 sec) SUBFIND: SO iteration 17: need to repeat for 173 halo centers. (took 0.00199357 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000169689 sec) SUBFIND: SO iteration 1: need to repeat for 792595 halo centers. (took 0.0169013 sec) SUBFIND: SO iteration 2: need to repeat for 792595 halo centers. (took 0.0183149 sec) SUBFIND: SO iteration 3: need to repeat for 792595 halo centers. (took 0.018236 sec) SUBFIND: SO iteration 4: need to repeat for 792595 halo centers. (took 0.0174417 sec) SUBFIND: SO iteration 5: need to repeat for 792595 halo centers. (took 0.0174405 sec) SUBFIND: SO iteration 6: need to repeat for 792595 halo centers. (took 0.017342 sec) SUBFIND: SO iteration 7: need to repeat for 792595 halo centers. (took 0.0182481 sec) SUBFIND: SO iteration 8: need to repeat for 792595 halo centers. (took 0.0174415 sec) SUBFIND: SO iteration 9: need to repeat for 792595 halo centers. (took 0.0174569 sec) SUBFIND: SO iteration 10: need to repeat for 792595 halo centers. (took 0.0179593 sec) SUBFIND: SO iteration 11: need to repeat for 792595 halo centers. (took 0.0174053 sec) SUBFIND: SO iteration 12: need to repeat for 792595 halo centers. (took 0.0184381 sec) SUBFIND: SO iteration 13: need to repeat for 792595 halo centers. (took 0.0178182 sec) SUBFIND: SO iteration 14: need to repeat for 792595 halo centers. (took 0.0174213 sec) SUBFIND: SO iteration 15: need to repeat for 792595 halo centers. (took 0.0187297 sec) SUBFIND: SO iteration 16: need to repeat for 436102 halo centers. (took 0.0172785 sec) SUBFIND: SO iteration 17: need to repeat for 16970 halo centers. (took 0.0115574 sec) SUBFIND: SO iteration 18: need to repeat for 529 halo centers. (took 0.00196664 sec) SUBFIND: SO iteration 19: need to repeat for 2 halo centers. (took 0.000210213 sec) SUBFIND: determining spherical overdensity masses took 1.12979 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0849256 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.42393 sec, total size 299.227 MB, corresponds to effective I/O rate of 210.142 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.42488 sec SUBFIND: Finished with SUBFIND. (total time=65.2041 sec) SUBFIND: Total number of subhalos with at least 20 particles: 806786 SUBFIND: Largest subhalo has 170 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997515 FOF: preparing output order of particles took 1.43291 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.33858 sec, total size 5350.74 MB, corresponds to effective I/O rate of 729.125 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 122 (rank 122 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 129 (rank 129 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 124 (rank 124 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 127 (rank 127 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 132 (rank 132 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.