TACC: Starting up job 4242141 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186445.37 Mb (on task= 216), Smallest = 186406.10 Mb (on task= 0), Average = 186427.66 Mb Total Mem: Largest = 191515.35 Mb (on task= 351), Smallest = 191515.33 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5109.23 Mb (on task= 0), Smallest = 5069.96 Mb (on task= 216), Average = 5087.67 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5109.23 Mb (on task= 0), Smallest = 5069.96 Mb (on task= 216), Average = 5087.67 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 351), Smallest = 95321.47 Mb (on task= 99), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c160-023.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 17.2329 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65677741 (tot= 65677741) masstab= 0 READIC: Type 1: 68219409 (tot= 68219409) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 100321 (tot= 100321) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.45946 sec, total size 6384.46 MB, corresponds to effective I/O rate of 1431.66 MB/sec READIC: Total number of particles : 133997471 INIT: Testing ID uniqueness... INIT: success. took=0.0724171 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=19538, determination of top-level tree involved 5 iterations and took 0.639156 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=98, reaching maximum imbalance of 1.11947|1.11973 DOMAIN: combining multiple-domains took 0.0146019 sec DOMAIN: exchange of 68319730 particles DOMAIN: particle exchange done. (took 0.347498 sec) DOMAIN: domain decomposition done. (took in total 1.01215 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0753985 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.865 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.155746 sec =69918.7 NTopnodes=22329 NTopleaves=19538 FOF: Start linking particles (presently allocated=193.059 MB) FOF: linking of small cells took 0.00187573 sec FOF: local links done (took 0.165187 sec, avg-work=0.146564, imbalance=1.12353). FOF: Marked=146625 out of the 68219409 primaries which are linked FOF: begin linking across processors (presently allocated=194.923 MB) FOF: have done 9343 cross links (processed 146625, took 0.00618531 sec) FOF: have done 2235 cross links (processed 70005, took 0.00529833 sec) FOF: have done 385 cross links (processed 10029, took 0.00475843 sec) FOF: have done 91 cross links (processed 1839, took 0.0045352 sec) FOF: have done 25 cross links (processed 485, took 0.00442434 sec) FOF: have done 7 cross links (processed 86, took 0.00443009 sec) FOF: have done 2 cross links (processed 17, took 0.00446862 sec) FOF: have done 1 cross links (processed 4, took 0.00438856 sec) FOF: have done 0 cross links (processed 3, took 0.00436035 sec) FOF: Local groups found. FOF: primary group finding took = 0.220812 sec FOF: Start finding nearest dm-particle (presently allocated=193.059 MB) FOF: fof-nearest iteration 1: need to repeat for 63394108 particles. (took = 0.104459 sec) FOF: fof-nearest iteration 2: need to repeat for 52617584 particles. (took = 0.120809 sec) FOF: fof-nearest iteration 3: need to repeat for 29070017 particles. (took = 0.128826 sec) FOF: fof-nearest iteration 4: need to repeat for 9153491 particles. (took = 0.0889718 sec) FOF: fof-nearest iteration 5: need to repeat for 1206933 particles. (took = 0.0358499 sec) FOF: fof-nearest iteration 6: need to repeat for 33897 particles. (took = 0.0084741 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.495901 sec FOF: compiling local group data and catalogue took = 0.0264856 sec FOF: Total number of FOF groups with at least 32 particles: 732115 FOF: Largest FOF group has 185 particles. FOF: Total number of particles in FOF groups: 133997471 FOF: group properties are now allocated.. (presently allocated=179.598 MB) FOF: computation of group properties took = 0.00894895 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0914284 sec FOF: Finished computing FoF groups. Complete work took 1.0553 sec (presently allocated=174.504 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.39 MB) GRAVTREE: Tree construction done. took 0.531232 sec =99077.2 NTopnodes=22329 NTopleaves=19538 tree-build-scalability=0.775152 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133977995 particles. (took 0.952813 sec) SUBFIND: ngb iteration 2: need to repeat for 133969253 particles. (took 0.813145 sec) SUBFIND: ngb iteration 3: need to repeat for 133961216 particles. (took 0.744069 sec) SUBFIND: ngb iteration 4: need to repeat for 133954384 particles. (took 0.701146 sec) SUBFIND: ngb iteration 5: need to repeat for 133948407 particles. (took 0.691251 sec) SUBFIND: ngb iteration 6: need to repeat for 133943091 particles. (took 0.695404 sec) SUBFIND: ngb iteration 7: need to repeat for 133938690 particles. (took 0.712669 sec) SUBFIND: ngb iteration 8: need to repeat for 133934103 particles. (took 0.743694 sec) SUBFIND: ngb iteration 9: need to repeat for 133929752 particles. (took 0.780887 sec) SUBFIND: ngb iteration 10: need to repeat for 133903429 particles. (took 0.824384 sec) SUBFIND: ngb iteration 11: need to repeat for 133034764 particles. (took 0.873009 sec) SUBFIND: ngb iteration 12: need to repeat for 126962271 particles. (took 0.91508 sec) SUBFIND: ngb iteration 13: need to repeat for 116834268 particles. (took 0.914461 sec) SUBFIND: ngb iteration 14: need to repeat for 104387769 particles. (took 0.884003 sec) SUBFIND: ngb iteration 15: need to repeat for 92484145 particles. (took 0.821076 sec) SUBFIND: ngb iteration 16: need to repeat for 82121597 particles. (took 0.753959 sec) SUBFIND: ngb iteration 17: need to repeat for 72362336 particles. (took 0.688518 sec) SUBFIND: ngb iteration 18: need to repeat for 61878446 particles. (took 0.624513 sec) SUBFIND: ngb iteration 19: need to repeat for 49523668 particles. (took 0.553262 sec) SUBFIND: ngb iteration 20: need to repeat for 35417007 particles. (took 0.470614 sec) SUBFIND: ngb iteration 21: need to repeat for 21684719 particles. (took 0.365383 sec) SUBFIND: ngb iteration 22: need to repeat for 10753174 particles. (took 0.254405 sec) SUBFIND: ngb iteration 23: need to repeat for 4128805 particles. (took 0.147756 sec) SUBFIND: ngb iteration 24: need to repeat for 1145060 particles. (took 0.0720078 sec) SUBFIND: ngb iteration 25: need to repeat for 232696 particles. (took 0.0266927 sec) SUBFIND: ngb iteration 26: need to repeat for 57171 particles. (took 0.00733081 sec) SUBFIND: ngb iteration 27: need to repeat for 36293 particles. (took 0.00201935 sec) SUBFIND: ngb iteration 28: need to repeat for 34394 particles. (took 0.00187842 sec) SUBFIND: ngb iteration 29: need to repeat for 33431 particles. (took 0.00219629 sec) SUBFIND: ngb iteration 30: need to repeat for 32031 particles. (took 0.00212068 sec) SUBFIND: ngb iteration 31: need to repeat for 30250 particles. (took 0.00236209 sec) SUBFIND: ngb iteration 32: need to repeat for 28260 particles. (took 0.00265241 sec) SUBFIND: ngb iteration 33: need to repeat for 26106 particles. (took 0.00374758 sec) SUBFIND: ngb iteration 34: need to repeat for 22965 particles. (took 0.00256062 sec) SUBFIND: ngb iteration 35: need to repeat for 19860 particles. (took 0.00229708 sec) SUBFIND: ngb iteration 36: need to repeat for 16089 particles. (took 0.00195956 sec) SUBFIND: ngb iteration 37: need to repeat for 12095 particles. (took 0.00190419 sec) SUBFIND: ngb iteration 38: need to repeat for 8318 particles. (took 0.00160461 sec) SUBFIND: ngb iteration 39: need to repeat for 5594 particles. (took 0.00139566 sec) SUBFIND: ngb iteration 40: need to repeat for 3035 particles. (took 0.00103332 sec) SUBFIND: ngb iteration 41: need to repeat for 1132 particles. (took 0.000712471 sec) SUBFIND: ngb iteration 42: need to repeat for 411 particles. (took 0.000682438 sec) SUBFIND: ngb iteration 43: need to repeat for 29 particles. (took 0.000431288 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 16.072 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997471 particles, for threshold size factor 0.6) SUBFIND: The other 732115 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00305098 sec SUBFIND: particle balance=1.11947 SUBFIND: subfind_exchange() took 0.453757 sec SUBFIND: particle balance for processing=1.00018 SUBFIND: subdomain decomposition took 0.104971 sec SUBFIND: serial subfind subdomain decomposition took 0.10351 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1695 took 40.4174 sec SUBFIND: root-task=0: Serial processing of halo 0 took 40.6729 SUBFIND: Processing overall took (total time=41.1209 sec) SUBFIND: 0 out of 21088 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 253386 SUBFIND: subfind_exchange() (for return to original CPU) took 0.513266 sec TREE: Full tree construction for all particles. (presently allocated=162.184 MB) GRAVTREE: Tree construction done. took 1.53824 sec =99077.2 NTopnodes=22329 NTopleaves=19538 tree-build-scalability=0.775152 SUBFIND: SO iteration 1: need to repeat for 732115 halo centers. (took 0.0197911 sec) SUBFIND: SO iteration 2: need to repeat for 732115 halo centers. (took 0.0175187 sec) SUBFIND: SO iteration 3: need to repeat for 732115 halo centers. (took 0.0173129 sec) SUBFIND: SO iteration 4: need to repeat for 732115 halo centers. (took 0.0168009 sec) SUBFIND: SO iteration 5: need to repeat for 732115 halo centers. (took 0.0166863 sec) SUBFIND: SO iteration 6: need to repeat for 732115 halo centers. (took 0.0165895 sec) SUBFIND: SO iteration 7: need to repeat for 732115 halo centers. (took 0.0171678 sec) SUBFIND: SO iteration 8: need to repeat for 732115 halo centers. (took 0.0165447 sec) SUBFIND: SO iteration 9: need to repeat for 732115 halo centers. (took 0.01652 sec) SUBFIND: SO iteration 10: need to repeat for 732115 halo centers. (took 0.0170624 sec) SUBFIND: SO iteration 11: need to repeat for 732115 halo centers. (took 0.0169001 sec) SUBFIND: SO iteration 12: need to repeat for 732115 halo centers. (took 0.0165516 sec) SUBFIND: SO iteration 13: need to repeat for 732115 halo centers. (took 0.0165405 sec) SUBFIND: SO iteration 14: need to repeat for 732115 halo centers. (took 0.0164864 sec) SUBFIND: SO iteration 15: need to repeat for 732115 halo centers. (took 0.0165014 sec) SUBFIND: SO iteration 16: need to repeat for 12992 halo centers. (took 0.0162184 sec) SUBFIND: SO iteration 17: need to repeat for 138 halo centers. (took 0.00171863 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000162609 sec) SUBFIND: SO iteration 1: need to repeat for 732115 halo centers. (took 0.0165268 sec) SUBFIND: SO iteration 2: need to repeat for 732115 halo centers. (took 0.016005 sec) SUBFIND: SO iteration 3: need to repeat for 732115 halo centers. (took 0.0165913 sec) SUBFIND: SO iteration 4: need to repeat for 732115 halo centers. (took 0.0163893 sec) SUBFIND: SO iteration 5: need to repeat for 732115 halo centers. (took 0.0163736 sec) SUBFIND: SO iteration 6: need to repeat for 732115 halo centers. (took 0.0163829 sec) SUBFIND: SO iteration 7: need to repeat for 732115 halo centers. (took 0.0164896 sec) SUBFIND: SO iteration 8: need to repeat for 732115 halo centers. (took 0.0164558 sec) SUBFIND: SO iteration 9: need to repeat for 732115 halo centers. (took 0.0171792 sec) SUBFIND: SO iteration 10: need to repeat for 732115 halo centers. (took 0.0164991 sec) SUBFIND: SO iteration 11: need to repeat for 732115 halo centers. (took 0.0164515 sec) SUBFIND: SO iteration 12: need to repeat for 732115 halo centers. (took 0.0163905 sec) SUBFIND: SO iteration 13: need to repeat for 732115 halo centers. (took 0.0171322 sec) SUBFIND: SO iteration 14: need to repeat for 732115 halo centers. (took 0.016478 sec) SUBFIND: SO iteration 15: need to repeat for 732115 halo centers. (took 0.0163959 sec) SUBFIND: SO iteration 16: need to repeat for 6560 halo centers. (took 0.01616 sec) SUBFIND: SO iteration 17: need to repeat for 54 halo centers. (took 0.00100593 sec) SUBFIND: SO iteration 1: need to repeat for 732115 halo centers. (took 0.0165939 sec) SUBFIND: SO iteration 2: need to repeat for 732115 halo centers. (took 0.0172651 sec) SUBFIND: SO iteration 3: need to repeat for 732115 halo centers. (took 0.017054 sec) SUBFIND: SO iteration 4: need to repeat for 732115 halo centers. (took 0.0176122 sec) SUBFIND: SO iteration 5: need to repeat for 732115 halo centers. (took 0.0165313 sec) SUBFIND: SO iteration 6: need to repeat for 732115 halo centers. (took 0.0164914 sec) SUBFIND: SO iteration 7: need to repeat for 732115 halo centers. (took 0.0169438 sec) SUBFIND: SO iteration 8: need to repeat for 732115 halo centers. (took 0.0165641 sec) SUBFIND: SO iteration 9: need to repeat for 732115 halo centers. (took 0.0167077 sec) SUBFIND: SO iteration 10: need to repeat for 732115 halo centers. (took 0.0165182 sec) SUBFIND: SO iteration 11: need to repeat for 732115 halo centers. (took 0.0165182 sec) SUBFIND: SO iteration 12: need to repeat for 732115 halo centers. (took 0.0165183 sec) SUBFIND: SO iteration 13: need to repeat for 732115 halo centers. (took 0.0177677 sec) SUBFIND: SO iteration 14: need to repeat for 732115 halo centers. (took 0.0175964 sec) SUBFIND: SO iteration 15: need to repeat for 732115 halo centers. (took 0.0180349 sec) SUBFIND: SO iteration 16: need to repeat for 13331 halo centers. (took 0.0181517 sec) SUBFIND: SO iteration 17: need to repeat for 142 halo centers. (took 0.00216779 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000197396 sec) SUBFIND: SO iteration 1: need to repeat for 732115 halo centers. (took 0.0187486 sec) SUBFIND: SO iteration 2: need to repeat for 732115 halo centers. (took 0.0179973 sec) SUBFIND: SO iteration 3: need to repeat for 732115 halo centers. (took 0.0174982 sec) SUBFIND: SO iteration 4: need to repeat for 732115 halo centers. (took 0.018179 sec) SUBFIND: SO iteration 5: need to repeat for 732115 halo centers. (took 0.0178636 sec) SUBFIND: SO iteration 6: need to repeat for 732115 halo centers. (took 0.0177725 sec) SUBFIND: SO iteration 7: need to repeat for 732115 halo centers. (took 0.0186588 sec) SUBFIND: SO iteration 8: need to repeat for 732115 halo centers. (took 0.0172562 sec) SUBFIND: SO iteration 9: need to repeat for 732115 halo centers. (took 0.0173995 sec) SUBFIND: SO iteration 10: need to repeat for 732115 halo centers. (took 0.0178748 sec) SUBFIND: SO iteration 11: need to repeat for 732115 halo centers. (took 0.0175796 sec) SUBFIND: SO iteration 12: need to repeat for 732115 halo centers. (took 0.0174451 sec) SUBFIND: SO iteration 13: need to repeat for 732115 halo centers. (took 0.0184917 sec) SUBFIND: SO iteration 14: need to repeat for 732115 halo centers. (took 0.0175387 sec) SUBFIND: SO iteration 15: need to repeat for 732115 halo centers. (took 0.0186293 sec) SUBFIND: SO iteration 16: need to repeat for 393755 halo centers. (took 0.0177545 sec) SUBFIND: SO iteration 17: need to repeat for 13959 halo centers. (took 0.0115073 sec) SUBFIND: SO iteration 18: need to repeat for 335 halo centers. (took 0.00229032 sec) SUBFIND: determining spherical overdensity masses took 1.11709 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0845694 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.44337 sec, total size 278.022 MB, corresponds to effective I/O rate of 192.62 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.44433 sec SUBFIND: Finished with SUBFIND. (total time=62.9515 sec) SUBFIND: Total number of subhalos with at least 20 particles: 753126 SUBFIND: Largest subhalo has 185 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997352 FOF: preparing output order of particles took 1.39537 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.95552 sec, total size 5352.06 MB, corresponds to effective I/O rate of 672.748 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 156 (rank 156 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 148 (rank 148 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.