TACC: Starting up job 4242141 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186450.34 Mb (on task= 378), Smallest = 186396.94 Mb (on task= 0), Average = 186429.01 Mb Total Mem: Largest = 191515.35 Mb (on task= 351), Smallest = 191515.33 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5118.39 Mb (on task= 0), Smallest = 5064.99 Mb (on task= 378), Average = 5086.32 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5118.39 Mb (on task= 0), Smallest = 5064.99 Mb (on task= 378), Average = 5086.32 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 351), Smallest = 95321.47 Mb (on task= 53), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c160-023.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 14.2336 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65710526 (tot= 65710526) masstab= 0 READIC: Type 1: 68176710 (tot= 68176710) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 110095 (tot= 110095) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.54991 sec, total size 6384.58 MB, corresponds to effective I/O rate of 1403.23 MB/sec READIC: Total number of particles : 133997331 INIT: Testing ID uniqueness... INIT: success. took=0.0715549 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=19636, determination of top-level tree involved 5 iterations and took 0.638337 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=98, reaching maximum imbalance of 1.11958|1.11973 DOMAIN: combining multiple-domains took 0.0140357 sec DOMAIN: exchange of 68286805 particles DOMAIN: particle exchange done. (took 0.341533 sec) DOMAIN: domain decomposition done. (took in total 1.00467 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.074132 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.891 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.15426 sec =69576.6 NTopnodes=22441 NTopleaves=19636 FOF: Start linking particles (presently allocated=192.905 MB) FOF: linking of small cells took 0.00197801 sec FOF: local links done (took 0.166634 sec, avg-work=0.147308, imbalance=1.12709). FOF: Marked=144713 out of the 68176710 primaries which are linked FOF: begin linking across processors (presently allocated=194.754 MB) FOF: have done 9003 cross links (processed 144713, took 0.00614192 sec) FOF: have done 2216 cross links (processed 69300, took 0.00526383 sec) FOF: have done 371 cross links (processed 9589, took 0.00479667 sec) FOF: have done 71 cross links (processed 1623, took 0.0045317 sec) FOF: have done 16 cross links (processed 300, took 0.00449407 sec) FOF: have done 1 cross links (processed 44, took 0.00440549 sec) FOF: have done 0 cross links (processed 2, took 0.00445625 sec) FOF: Local groups found. FOF: primary group finding took = 0.213083 sec FOF: Start finding nearest dm-particle (presently allocated=192.905 MB) FOF: fof-nearest iteration 1: need to repeat for 63407614 particles. (took = 0.105331 sec) FOF: fof-nearest iteration 2: need to repeat for 52533272 particles. (took = 0.12237 sec) FOF: fof-nearest iteration 3: need to repeat for 28852465 particles. (took = 0.130549 sec) FOF: fof-nearest iteration 4: need to repeat for 9007349 particles. (took = 0.0891402 sec) FOF: fof-nearest iteration 5: need to repeat for 1179835 particles. (took = 0.0355268 sec) FOF: fof-nearest iteration 6: need to repeat for 33019 particles. (took = 0.00837746 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.499711 sec FOF: compiling local group data and catalogue took = 0.0262154 sec FOF: Total number of FOF groups with at least 32 particles: 709145 FOF: Largest FOF group has 190 particles. FOF: Total number of particles in FOF groups: 133997331 FOF: group properties are now allocated.. (presently allocated=179.562 MB) FOF: computation of group properties took = 0.00895275 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0906702 sec FOF: Finished computing FoF groups. Complete work took 1.04597 sec (presently allocated=174.507 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.294 MB) GRAVTREE: Tree construction done. took 0.526264 sec =98662.5 NTopnodes=22441 NTopleaves=19636 tree-build-scalability=0.773074 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133985942 particles. (took 0.965184 sec) SUBFIND: ngb iteration 2: need to repeat for 133979521 particles. (took 0.819778 sec) SUBFIND: ngb iteration 3: need to repeat for 133974078 particles. (took 0.737012 sec) SUBFIND: ngb iteration 4: need to repeat for 133970021 particles. (took 0.702686 sec) SUBFIND: ngb iteration 5: need to repeat for 133966874 particles. (took 0.6894 sec) SUBFIND: ngb iteration 6: need to repeat for 133963633 particles. (took 0.693239 sec) SUBFIND: ngb iteration 7: need to repeat for 133960889 particles. (took 0.710561 sec) SUBFIND: ngb iteration 8: need to repeat for 133958017 particles. (took 0.739893 sec) SUBFIND: ngb iteration 9: need to repeat for 133955273 particles. (took 0.777495 sec) SUBFIND: ngb iteration 10: need to repeat for 133919919 particles. (took 0.820879 sec) SUBFIND: ngb iteration 11: need to repeat for 132826658 particles. (took 0.868604 sec) SUBFIND: ngb iteration 12: need to repeat for 126297006 particles. (took 0.908644 sec) SUBFIND: ngb iteration 13: need to repeat for 116175033 particles. (took 0.905533 sec) SUBFIND: ngb iteration 14: need to repeat for 103886381 particles. (took 0.869737 sec) SUBFIND: ngb iteration 15: need to repeat for 92242771 particles. (took 0.809826 sec) SUBFIND: ngb iteration 16: need to repeat for 82222129 particles. (took 0.744713 sec) SUBFIND: ngb iteration 17: need to repeat for 72871577 particles. (took 0.685126 sec) SUBFIND: ngb iteration 18: need to repeat for 62912410 particles. (took 0.62895 sec) SUBFIND: ngb iteration 19: need to repeat for 51162941 particles. (took 0.570481 sec) SUBFIND: ngb iteration 20: need to repeat for 37436215 particles. (took 0.493265 sec) SUBFIND: ngb iteration 21: need to repeat for 23589297 particles. (took 0.383169 sec) SUBFIND: ngb iteration 22: need to repeat for 12091179 particles. (took 0.26245 sec) SUBFIND: ngb iteration 23: need to repeat for 4814942 particles. (took 0.156237 sec) SUBFIND: ngb iteration 24: need to repeat for 1379138 particles. (took 0.0746859 sec) SUBFIND: ngb iteration 25: need to repeat for 273286 particles. (took 0.0271201 sec) SUBFIND: ngb iteration 26: need to repeat for 51722 particles. (took 0.00686324 sec) SUBFIND: ngb iteration 27: need to repeat for 24931 particles. (took 0.00222306 sec) SUBFIND: ngb iteration 28: need to repeat for 22453 particles. (took 0.00192948 sec) SUBFIND: ngb iteration 29: need to repeat for 21945 particles. (took 0.00181971 sec) SUBFIND: ngb iteration 30: need to repeat for 21055 particles. (took 0.00197704 sec) SUBFIND: ngb iteration 31: need to repeat for 19920 particles. (took 0.00207012 sec) SUBFIND: ngb iteration 32: need to repeat for 18395 particles. (took 0.00178873 sec) SUBFIND: ngb iteration 33: need to repeat for 16443 particles. (took 0.00229791 sec) SUBFIND: ngb iteration 34: need to repeat for 14088 particles. (took 0.00276303 sec) SUBFIND: ngb iteration 35: need to repeat for 11865 particles. (took 0.00212051 sec) SUBFIND: ngb iteration 36: need to repeat for 9767 particles. (took 0.00163658 sec) SUBFIND: ngb iteration 37: need to repeat for 7627 particles. (took 0.0013143 sec) SUBFIND: ngb iteration 38: need to repeat for 5030 particles. (took 0.00147256 sec) SUBFIND: ngb iteration 39: need to repeat for 3037 particles. (took 0.00119885 sec) SUBFIND: ngb iteration 40: need to repeat for 1596 particles. (took 0.00104398 sec) SUBFIND: ngb iteration 41: need to repeat for 773 particles. (took 0.000867486 sec) SUBFIND: ngb iteration 42: need to repeat for 321 particles. (took 0.000729691 sec) SUBFIND: ngb iteration 43: need to repeat for 71 particles. (took 0.000551846 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 16.0882 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997331 particles, for threshold size factor 0.6) SUBFIND: The other 709145 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00263396 sec SUBFIND: particle balance=1.11939 SUBFIND: subfind_exchange() took 0.447801 sec SUBFIND: particle balance for processing=1.00028 SUBFIND: subdomain decomposition took 0.10463 sec SUBFIND: serial subfind subdomain decomposition took 0.102883 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1642 took 39.2159 sec SUBFIND: root-task=0: Serial processing of halo 0 took 39.4703 SUBFIND: Processing overall took (total time=39.645 sec) SUBFIND: 0 out of 24319 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516966 ALLOCATE: Changing to MaxPartSph = 253513 SUBFIND: subfind_exchange() (for return to original CPU) took 0.512935 sec TREE: Full tree construction for all particles. (presently allocated=161.943 MB) GRAVTREE: Tree construction done. took 1.39473 sec =98662.5 NTopnodes=22441 NTopleaves=19636 tree-build-scalability=0.773074 SUBFIND: SO iteration 1: need to repeat for 709145 halo centers. (took 0.0198656 sec) SUBFIND: SO iteration 2: need to repeat for 709145 halo centers. (took 0.0173572 sec) SUBFIND: SO iteration 3: need to repeat for 709145 halo centers. (took 0.0171818 sec) SUBFIND: SO iteration 4: need to repeat for 709145 halo centers. (took 0.0165865 sec) SUBFIND: SO iteration 5: need to repeat for 709145 halo centers. (took 0.0166156 sec) SUBFIND: SO iteration 6: need to repeat for 709145 halo centers. (took 0.0167224 sec) SUBFIND: SO iteration 7: need to repeat for 709145 halo centers. (took 0.0163436 sec) SUBFIND: SO iteration 8: need to repeat for 709145 halo centers. (took 0.0166687 sec) SUBFIND: SO iteration 9: need to repeat for 709145 halo centers. (took 0.0163207 sec) SUBFIND: SO iteration 10: need to repeat for 709145 halo centers. (took 0.0170429 sec) SUBFIND: SO iteration 11: need to repeat for 709145 halo centers. (took 0.0169577 sec) SUBFIND: SO iteration 12: need to repeat for 709145 halo centers. (took 0.0166362 sec) SUBFIND: SO iteration 13: need to repeat for 709145 halo centers. (took 0.0163599 sec) SUBFIND: SO iteration 14: need to repeat for 709145 halo centers. (took 0.0163966 sec) SUBFIND: SO iteration 15: need to repeat for 709145 halo centers. (took 0.0163475 sec) SUBFIND: SO iteration 16: need to repeat for 11860 halo centers. (took 0.0160937 sec) SUBFIND: SO iteration 17: need to repeat for 106 halo centers. (took 0.00157896 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000167562 sec) SUBFIND: SO iteration 1: need to repeat for 709145 halo centers. (took 0.0163388 sec) SUBFIND: SO iteration 2: need to repeat for 709145 halo centers. (took 0.016009 sec) SUBFIND: SO iteration 3: need to repeat for 709145 halo centers. (took 0.0162309 sec) SUBFIND: SO iteration 4: need to repeat for 709145 halo centers. (took 0.0161412 sec) SUBFIND: SO iteration 5: need to repeat for 709145 halo centers. (took 0.0170295 sec) SUBFIND: SO iteration 6: need to repeat for 709145 halo centers. (took 0.0167291 sec) SUBFIND: SO iteration 7: need to repeat for 709145 halo centers. (took 0.0169774 sec) SUBFIND: SO iteration 8: need to repeat for 709145 halo centers. (took 0.0168242 sec) SUBFIND: SO iteration 9: need to repeat for 709145 halo centers. (took 0.0170039 sec) SUBFIND: SO iteration 10: need to repeat for 709145 halo centers. (took 0.0169478 sec) SUBFIND: SO iteration 11: need to repeat for 709145 halo centers. (took 0.0170071 sec) SUBFIND: SO iteration 12: need to repeat for 709145 halo centers. (took 0.0166525 sec) SUBFIND: SO iteration 13: need to repeat for 709145 halo centers. (took 0.0168525 sec) SUBFIND: SO iteration 14: need to repeat for 709145 halo centers. (took 0.0166146 sec) SUBFIND: SO iteration 15: need to repeat for 709145 halo centers. (took 0.0165669 sec) SUBFIND: SO iteration 16: need to repeat for 5969 halo centers. (took 0.0162805 sec) SUBFIND: SO iteration 17: need to repeat for 42 halo centers. (took 0.00107887 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000256062 sec) SUBFIND: SO iteration 1: need to repeat for 709145 halo centers. (took 0.0166042 sec) SUBFIND: SO iteration 2: need to repeat for 709145 halo centers. (took 0.017173 sec) SUBFIND: SO iteration 3: need to repeat for 709145 halo centers. (took 0.0170144 sec) SUBFIND: SO iteration 4: need to repeat for 709145 halo centers. (took 0.0165381 sec) SUBFIND: SO iteration 5: need to repeat for 709145 halo centers. (took 0.0163861 sec) SUBFIND: SO iteration 6: need to repeat for 709145 halo centers. (took 0.0162695 sec) SUBFIND: SO iteration 7: need to repeat for 709145 halo centers. (took 0.0166054 sec) SUBFIND: SO iteration 8: need to repeat for 709145 halo centers. (took 0.0173199 sec) SUBFIND: SO iteration 9: need to repeat for 709145 halo centers. (took 0.0163173 sec) SUBFIND: SO iteration 10: need to repeat for 709145 halo centers. (took 0.0163457 sec) SUBFIND: SO iteration 11: need to repeat for 709145 halo centers. (took 0.0162992 sec) SUBFIND: SO iteration 12: need to repeat for 709145 halo centers. (took 0.0163423 sec) SUBFIND: SO iteration 13: need to repeat for 709145 halo centers. (took 0.0163108 sec) SUBFIND: SO iteration 14: need to repeat for 709145 halo centers. (took 0.0162726 sec) SUBFIND: SO iteration 15: need to repeat for 709145 halo centers. (took 0.0171995 sec) SUBFIND: SO iteration 16: need to repeat for 12173 halo centers. (took 0.0160194 sec) SUBFIND: SO iteration 17: need to repeat for 109 halo centers. (took 0.00155815 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000174496 sec) SUBFIND: SO iteration 1: need to repeat for 709145 halo centers. (took 0.0163262 sec) SUBFIND: SO iteration 2: need to repeat for 709145 halo centers. (took 0.0173819 sec) SUBFIND: SO iteration 3: need to repeat for 709145 halo centers. (took 0.0169972 sec) SUBFIND: SO iteration 4: need to repeat for 709145 halo centers. (took 0.0170803 sec) SUBFIND: SO iteration 5: need to repeat for 709145 halo centers. (took 0.0169951 sec) SUBFIND: SO iteration 6: need to repeat for 709145 halo centers. (took 0.0170494 sec) SUBFIND: SO iteration 7: need to repeat for 709145 halo centers. (took 0.0170533 sec) SUBFIND: SO iteration 8: need to repeat for 709145 halo centers. (took 0.0175596 sec) SUBFIND: SO iteration 9: need to repeat for 709145 halo centers. (took 0.0169893 sec) SUBFIND: SO iteration 10: need to repeat for 709145 halo centers. (took 0.0179304 sec) SUBFIND: SO iteration 11: need to repeat for 709145 halo centers. (took 0.0173778 sec) SUBFIND: SO iteration 12: need to repeat for 709145 halo centers. (took 0.0170444 sec) SUBFIND: SO iteration 13: need to repeat for 709145 halo centers. (took 0.0171024 sec) SUBFIND: SO iteration 14: need to repeat for 709145 halo centers. (took 0.0170465 sec) SUBFIND: SO iteration 15: need to repeat for 709145 halo centers. (took 0.0170809 sec) SUBFIND: SO iteration 16: need to repeat for 378713 halo centers. (took 0.0169749 sec) SUBFIND: SO iteration 17: need to repeat for 12901 halo centers. (took 0.0110714 sec) SUBFIND: SO iteration 18: need to repeat for 335 halo centers. (took 0.00162434 sec) SUBFIND: determining spherical overdensity masses took 1.09551 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0796149 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.63506 sec, total size 270.101 MB, corresponds to effective I/O rate of 165.193 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.63604 sec SUBFIND: Finished with SUBFIND. (total time=61.5007 sec) SUBFIND: Total number of subhalos with at least 20 particles: 733388 SUBFIND: Largest subhalo has 190 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997331 FOF: preparing output order of particles took 1.39717 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.43548 sec, total size 5352.43 MB, corresponds to effective I/O rate of 634.514 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 353 (rank 353 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 342 (rank 342 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 354 (rank 354 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 192 (rank 192 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.