TACC: Starting up job 4242141 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186449.76 Mb (on task= 54), Smallest = 186399.14 Mb (on task= 0), Average = 186428.89 Mb Total Mem: Largest = 191515.35 Mb (on task= 351), Smallest = 191515.33 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5116.19 Mb (on task= 0), Smallest = 5065.57 Mb (on task= 54), Average = 5086.44 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5116.19 Mb (on task= 0), Smallest = 5065.57 Mb (on task= 54), Average = 5086.44 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 351), Smallest = 95321.46 Mb (on task= 163), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c160-023.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.693 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65762667 (tot= 65762667) masstab= 0 READIC: Type 1: 68105011 (tot= 68105011) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 129726 (tot= 129726) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.30304 sec, total size 6384.78 MB, corresponds to effective I/O rate of 1483.78 MB/sec READIC: Total number of particles : 133997404 INIT: Testing ID uniqueness... INIT: success. took=0.0713215 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=19104, determination of top-level tree involved 5 iterations and took 0.63676 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=177 for nextra=122, reaching maximum imbalance of 1.1141|1.11411 DOMAIN: combining multiple-domains took 0.0137684 sec DOMAIN: exchange of 68234737 particles DOMAIN: particle exchange done. (took 0.350101 sec) DOMAIN: domain decomposition done. (took in total 1.0116 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0750995 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.922 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.15397 sec =68082.5 NTopnodes=21833 NTopleaves=19104 FOF: Start linking particles (presently allocated=192.905 MB) FOF: linking of small cells took 0.00194971 sec FOF: local links done (took 0.16863 sec, avg-work=0.148874, imbalance=1.12557). FOF: Marked=152640 out of the 68105011 primaries which are linked FOF: begin linking across processors (presently allocated=194.769 MB) FOF: have done 9267 cross links (processed 152640, took 0.00621422 sec) FOF: have done 2339 cross links (processed 73034, took 0.00521461 sec) FOF: have done 372 cross links (processed 10216, took 0.00474454 sec) FOF: have done 86 cross links (processed 1735, took 0.00451961 sec) FOF: have done 16 cross links (processed 269, took 0.0044959 sec) FOF: have done 4 cross links (processed 46, took 0.00435212 sec) FOF: have done 1 cross links (processed 13, took 0.00442072 sec) FOF: have done 1 cross links (processed 12, took 0.00444591 sec) FOF: have done 0 cross links (processed 2, took 0.00437668 sec) FOF: Local groups found. FOF: primary group finding took = 0.224108 sec FOF: Start finding nearest dm-particle (presently allocated=192.905 MB) FOF: fof-nearest iteration 1: need to repeat for 63427515 particles. (took = 0.105898 sec) FOF: fof-nearest iteration 2: need to repeat for 52358806 particles. (took = 0.122157 sec) FOF: fof-nearest iteration 3: need to repeat for 28462919 particles. (took = 0.129987 sec) FOF: fof-nearest iteration 4: need to repeat for 8741174 particles. (took = 0.0877996 sec) FOF: fof-nearest iteration 5: need to repeat for 1129314 particles. (took = 0.0346227 sec) FOF: fof-nearest iteration 6: need to repeat for 31548 particles. (took = 0.00817394 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.497122 sec FOF: compiling local group data and catalogue took = 0.0259293 sec FOF: Total number of FOF groups with at least 32 particles: 665184 FOF: Largest FOF group has 400 particles. FOF: Total number of particles in FOF groups: 133997404 FOF: group properties are now allocated.. (presently allocated=179.622 MB) FOF: computation of group properties took = 0.00868103 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0927308 sec FOF: Finished computing FoF groups. Complete work took 1.05926 sec (presently allocated=174.509 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=180.173 MB) GRAVTREE: Tree construction done. took 0.526255 sec =97053.8 NTopnodes=21833 NTopleaves=19104 tree-build-scalability=0.775563 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133992686 particles. (took 1.00881 sec) SUBFIND: ngb iteration 2: need to repeat for 133990356 particles. (took 0.867467 sec) SUBFIND: ngb iteration 3: need to repeat for 133989231 particles. (took 0.7897 sec) SUBFIND: ngb iteration 4: need to repeat for 133987583 particles. (took 0.747786 sec) SUBFIND: ngb iteration 5: need to repeat for 133986129 particles. (took 0.736553 sec) SUBFIND: ngb iteration 6: need to repeat for 133985291 particles. (took 0.745313 sec) SUBFIND: ngb iteration 7: need to repeat for 133984471 particles. (took 0.764411 sec) SUBFIND: ngb iteration 8: need to repeat for 133983121 particles. (took 0.793665 sec) SUBFIND: ngb iteration 9: need to repeat for 133981724 particles. (took 0.833395 sec) SUBFIND: ngb iteration 10: need to repeat for 133916692 particles. (took 0.880682 sec) SUBFIND: ngb iteration 11: need to repeat for 132297642 particles. (took 0.934246 sec) SUBFIND: ngb iteration 12: need to repeat for 125113704 particles. (took 0.973804 sec) SUBFIND: ngb iteration 13: need to repeat for 114976285 particles. (took 0.964587 sec) SUBFIND: ngb iteration 14: need to repeat for 103008692 particles. (took 0.925357 sec) SUBFIND: ngb iteration 15: need to repeat for 91802842 particles. (took 0.864938 sec) SUBFIND: ngb iteration 16: need to repeat for 82260145 particles. (took 0.800294 sec) SUBFIND: ngb iteration 17: need to repeat for 73445510 particles. (took 0.739708 sec) SUBFIND: ngb iteration 18: need to repeat for 64226362 particles. (took 0.677071 sec) SUBFIND: ngb iteration 19: need to repeat for 53438358 particles. (took 0.612119 sec) SUBFIND: ngb iteration 20: need to repeat for 40569018 particles. (took 0.531953 sec) SUBFIND: ngb iteration 21: need to repeat for 26912677 particles. (took 0.427032 sec) SUBFIND: ngb iteration 22: need to repeat for 14767880 particles. (took 0.30424 sec) SUBFIND: ngb iteration 23: need to repeat for 6390149 particles. (took 0.186243 sec) SUBFIND: ngb iteration 24: need to repeat for 2013304 particles. (took 0.0993281 sec) SUBFIND: ngb iteration 25: need to repeat for 425943 particles. (took 0.0402249 sec) SUBFIND: ngb iteration 26: need to repeat for 63170 particles. (took 0.0121242 sec) SUBFIND: ngb iteration 27: need to repeat for 13444 particles. (took 0.00244466 sec) SUBFIND: ngb iteration 28: need to repeat for 9247 particles. (took 0.00132262 sec) SUBFIND: ngb iteration 29: need to repeat for 8766 particles. (took 0.00166143 sec) SUBFIND: ngb iteration 30: need to repeat for 8301 particles. (took 0.00171991 sec) SUBFIND: ngb iteration 31: need to repeat for 7683 particles. (took 0.00162204 sec) SUBFIND: ngb iteration 32: need to repeat for 7031 particles. (took 0.00155925 sec) SUBFIND: ngb iteration 33: need to repeat for 5958 particles. (took 0.0022634 sec) SUBFIND: ngb iteration 34: need to repeat for 4964 particles. (took 0.00267091 sec) SUBFIND: ngb iteration 35: need to repeat for 4045 particles. (took 0.00120661 sec) SUBFIND: ngb iteration 36: need to repeat for 3039 particles. (took 0.00158659 sec) SUBFIND: ngb iteration 37: need to repeat for 2051 particles. (took 0.000997271 sec) SUBFIND: ngb iteration 38: need to repeat for 1250 particles. (took 0.000973109 sec) SUBFIND: ngb iteration 39: need to repeat for 749 particles. (took 0.00095512 sec) SUBFIND: ngb iteration 40: need to repeat for 489 particles. (took 0.000950448 sec) SUBFIND: ngb iteration 41: need to repeat for 276 particles. (took 0.000729663 sec) SUBFIND: ngb iteration 42: need to repeat for 122 particles. (took 0.000508755 sec) SUBFIND: ngb iteration 43: need to repeat for 7 particles. (took 0.000399109 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 17.2929 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997404 particles, for threshold size factor 0.6) SUBFIND: The other 665184 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00277221 sec SUBFIND: particle balance=1.11375 SUBFIND: subfind_exchange() took 0.451048 sec SUBFIND: particle balance for processing=1.00078 SUBFIND: subdomain decomposition took 0.104938 sec SUBFIND: serial subfind subdomain decomposition took 0.103904 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1540 took 37.0624 sec SUBFIND: root-task=0: Serial processing of halo 0 took 37.3188 SUBFIND: Processing overall took (total time=37.6104 sec) SUBFIND: 0 out of 31408 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 253715 SUBFIND: subfind_exchange() (for return to original CPU) took 0.511968 sec TREE: Full tree construction for all particles. (presently allocated=162.328 MB) GRAVTREE: Tree construction done. took 1.40805 sec =97053.8 NTopnodes=21833 NTopleaves=19104 tree-build-scalability=0.775563 SUBFIND: SO iteration 1: need to repeat for 665184 halo centers. (took 0.0205996 sec) SUBFIND: SO iteration 2: need to repeat for 665184 halo centers. (took 0.0175493 sec) SUBFIND: SO iteration 3: need to repeat for 665184 halo centers. (took 0.0172911 sec) SUBFIND: SO iteration 4: need to repeat for 665184 halo centers. (took 0.0161563 sec) SUBFIND: SO iteration 5: need to repeat for 665184 halo centers. (took 0.0161251 sec) SUBFIND: SO iteration 6: need to repeat for 665184 halo centers. (took 0.0161345 sec) SUBFIND: SO iteration 7: need to repeat for 665184 halo centers. (took 0.0160478 sec) SUBFIND: SO iteration 8: need to repeat for 665184 halo centers. (took 0.0180077 sec) SUBFIND: SO iteration 9: need to repeat for 665184 halo centers. (took 0.0158866 sec) SUBFIND: SO iteration 10: need to repeat for 665184 halo centers. (took 0.0162285 sec) SUBFIND: SO iteration 11: need to repeat for 665184 halo centers. (took 0.0185519 sec) SUBFIND: SO iteration 12: need to repeat for 665184 halo centers. (took 0.0158437 sec) SUBFIND: SO iteration 13: need to repeat for 665184 halo centers. (took 0.0182581 sec) SUBFIND: SO iteration 14: need to repeat for 665184 halo centers. (took 0.015982 sec) SUBFIND: SO iteration 15: need to repeat for 665184 halo centers. (took 0.0189569 sec) SUBFIND: SO iteration 16: need to repeat for 10128 halo centers. (took 0.0156881 sec) SUBFIND: SO iteration 17: need to repeat for 95 halo centers. (took 0.00145771 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000179028 sec) SUBFIND: SO iteration 1: need to repeat for 665184 halo centers. (took 0.0167428 sec) SUBFIND: SO iteration 2: need to repeat for 665184 halo centers. (took 0.0166615 sec) SUBFIND: SO iteration 3: need to repeat for 665184 halo centers. (took 0.0204584 sec) SUBFIND: SO iteration 4: need to repeat for 665184 halo centers. (took 0.0166595 sec) SUBFIND: SO iteration 5: need to repeat for 665184 halo centers. (took 0.0164147 sec) SUBFIND: SO iteration 6: need to repeat for 665184 halo centers. (took 0.0162928 sec) SUBFIND: SO iteration 7: need to repeat for 665184 halo centers. (took 0.0157611 sec) SUBFIND: SO iteration 8: need to repeat for 665184 halo centers. (took 0.0158507 sec) SUBFIND: SO iteration 9: need to repeat for 665184 halo centers. (took 0.0157774 sec) SUBFIND: SO iteration 10: need to repeat for 665184 halo centers. (took 0.0157512 sec) SUBFIND: SO iteration 11: need to repeat for 665184 halo centers. (took 0.0157501 sec) SUBFIND: SO iteration 12: need to repeat for 665184 halo centers. (took 0.0157362 sec) SUBFIND: SO iteration 13: need to repeat for 665184 halo centers. (took 0.0157005 sec) SUBFIND: SO iteration 14: need to repeat for 665184 halo centers. (took 0.0161429 sec) SUBFIND: SO iteration 15: need to repeat for 665184 halo centers. (took 0.0160109 sec) SUBFIND: SO iteration 16: need to repeat for 5104 halo centers. (took 0.0156698 sec) SUBFIND: SO iteration 17: need to repeat for 34 halo centers. (took 0.000847241 sec) SUBFIND: SO iteration 1: need to repeat for 665184 halo centers. (took 0.0158627 sec) SUBFIND: SO iteration 2: need to repeat for 665184 halo centers. (took 0.0182923 sec) SUBFIND: SO iteration 3: need to repeat for 665184 halo centers. (took 0.0163907 sec) SUBFIND: SO iteration 4: need to repeat for 665184 halo centers. (took 0.016021 sec) SUBFIND: SO iteration 5: need to repeat for 665184 halo centers. (took 0.0173093 sec) SUBFIND: SO iteration 6: need to repeat for 665184 halo centers. (took 0.0163376 sec) SUBFIND: SO iteration 7: need to repeat for 665184 halo centers. (took 0.0158216 sec) SUBFIND: SO iteration 8: need to repeat for 665184 halo centers. (took 0.0158491 sec) SUBFIND: SO iteration 9: need to repeat for 665184 halo centers. (took 0.0162684 sec) SUBFIND: SO iteration 10: need to repeat for 665184 halo centers. (took 0.0162471 sec) SUBFIND: SO iteration 11: need to repeat for 665184 halo centers. (took 0.0179695 sec) SUBFIND: SO iteration 12: need to repeat for 665184 halo centers. (took 0.0158514 sec) SUBFIND: SO iteration 13: need to repeat for 665184 halo centers. (took 0.020807 sec) SUBFIND: SO iteration 14: need to repeat for 665184 halo centers. (took 0.0158575 sec) SUBFIND: SO iteration 15: need to repeat for 665184 halo centers. (took 0.0159557 sec) SUBFIND: SO iteration 16: need to repeat for 10394 halo centers. (took 0.0155467 sec) SUBFIND: SO iteration 17: need to repeat for 100 halo centers. (took 0.00136172 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000157261 sec) SUBFIND: SO iteration 1: need to repeat for 665184 halo centers. (took 0.0194552 sec) SUBFIND: SO iteration 2: need to repeat for 665184 halo centers. (took 0.016916 sec) SUBFIND: SO iteration 3: need to repeat for 665184 halo centers. (took 0.0160888 sec) SUBFIND: SO iteration 4: need to repeat for 665184 halo centers. (took 0.0172242 sec) SUBFIND: SO iteration 5: need to repeat for 665184 halo centers. (took 0.0167711 sec) SUBFIND: SO iteration 6: need to repeat for 665184 halo centers. (took 0.0174436 sec) SUBFIND: SO iteration 7: need to repeat for 665184 halo centers. (took 0.0171959 sec) SUBFIND: SO iteration 8: need to repeat for 665184 halo centers. (took 0.0165836 sec) SUBFIND: SO iteration 9: need to repeat for 665184 halo centers. (took 0.0177859 sec) SUBFIND: SO iteration 10: need to repeat for 665184 halo centers. (took 0.0167701 sec) SUBFIND: SO iteration 11: need to repeat for 665184 halo centers. (took 0.0167988 sec) SUBFIND: SO iteration 12: need to repeat for 665184 halo centers. (took 0.0170882 sec) SUBFIND: SO iteration 13: need to repeat for 665184 halo centers. (took 0.0169007 sec) SUBFIND: SO iteration 14: need to repeat for 665184 halo centers. (took 0.0167468 sec) SUBFIND: SO iteration 15: need to repeat for 665184 halo centers. (took 0.0173189 sec) SUBFIND: SO iteration 16: need to repeat for 351331 halo centers. (took 0.0170356 sec) SUBFIND: SO iteration 17: need to repeat for 10957 halo centers. (took 0.0108465 sec) SUBFIND: SO iteration 18: need to repeat for 230 halo centers. (took 0.00142248 sec) SUBFIND: determining spherical overdensity masses took 1.09447 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0897689 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.46781 sec, total size 255.129 MB, corresponds to effective I/O rate of 173.816 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.46868 sec SUBFIND: Finished with SUBFIND. (total time=60.5283 sec) SUBFIND: Total number of subhalos with at least 20 particles: 696526 SUBFIND: Largest subhalo has 267 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997404 FOF: preparing output order of particles took 1.40538 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.40268 sec, total size 5353.03 MB, corresponds to effective I/O rate of 723.12 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 60 (rank 60 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 71 (rank 71 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 61 (rank 61 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 76 (rank 76 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.