TACC: Starting up job 4242141 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186456.55 Mb (on task= 351), Smallest = 186404.74 Mb (on task= 0), Average = 186428.49 Mb Total Mem: Largest = 191515.35 Mb (on task= 351), Smallest = 191515.33 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5110.59 Mb (on task= 0), Smallest = 5058.80 Mb (on task= 351), Average = 5086.85 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5110.59 Mb (on task= 0), Smallest = 5058.80 Mb (on task= 351), Average = 5086.85 Mb avail /dev/shm: Largest = 95321.54 Mb (on task= 351), Smallest = 95321.47 Mb (on task= 49), Average = 95321.51 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c160-023.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.3048 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 65781496 (tot= 65781496) masstab= 0 READIC: Type 1: 68014948 (tot= 68014948) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 201048 (tot= 201048) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.77135 sec, total size 6384.85 MB, corresponds to effective I/O rate of 1338.16 MB/sec READIC: Total number of particles : 133997492 INIT: Testing ID uniqueness... INIT: success. took=0.0729515 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=19510, determination of top-level tree involved 5 iterations and took 0.637514 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=98, reaching maximum imbalance of 1.11893|1.11973 DOMAIN: combining multiple-domains took 0.0137035 sec DOMAIN: exchange of 68215996 particles DOMAIN: particle exchange done. (took 0.345732 sec) DOMAIN: domain decomposition done. (took in total 1.00764 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0745959 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=173.943 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.154828 sec =66118 NTopnodes=22297 NTopleaves=19510 FOF: Start linking particles (presently allocated=192.512 MB) FOF: linking of small cells took 0.00196679 sec FOF: local links done (took 0.173375 sec, avg-work=0.154056, imbalance=1.12389). FOF: Marked=151606 out of the 68014948 primaries which are linked FOF: begin linking across processors (presently allocated=194.35 MB) FOF: have done 8787 cross links (processed 151606, took 0.00659374 sec) FOF: have done 2193 cross links (processed 73422, took 0.00528011 sec) FOF: have done 380 cross links (processed 9967, took 0.00474181 sec) FOF: have done 81 cross links (processed 1779, took 0.00456541 sec) FOF: have done 17 cross links (processed 375, took 0.00450779 sec) FOF: have done 3 cross links (processed 72, took 0.00451933 sec) FOF: have done 0 cross links (processed 16, took 0.00442426 sec) FOF: Local groups found. FOF: primary group finding took = 0.220309 sec FOF: Start finding nearest dm-particle (presently allocated=192.512 MB) FOF: fof-nearest iteration 1: need to repeat for 63361226 particles. (took = 0.10865 sec) FOF: fof-nearest iteration 2: need to repeat for 51777832 particles. (took = 0.125882 sec) FOF: fof-nearest iteration 3: need to repeat for 27422407 particles. (took = 0.134725 sec) FOF: fof-nearest iteration 4: need to repeat for 8063366 particles. (took = 0.0896717 sec) FOF: fof-nearest iteration 5: need to repeat for 1005498 particles. (took = 0.0334175 sec) FOF: fof-nearest iteration 6: need to repeat for 28064 particles. (took = 0.00771915 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.508461 sec FOF: compiling local group data and catalogue took = 0.0259274 sec FOF: Total number of FOF groups with at least 32 particles: 547130 FOF: Largest FOF group has 247 particles. FOF: Total number of particles in FOF groups: 133997492 FOF: group properties are now allocated.. (presently allocated=179.477 MB) FOF: computation of group properties took = 0.00838579 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0958344 sec FOF: Finished computing FoF groups. Complete work took 1.06595 sec (presently allocated=174.419 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=179.782 MB) GRAVTREE: Tree construction done. took 0.520657 sec =94659.6 NTopnodes=22297 NTopleaves=19510 tree-build-scalability=0.764996 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133997097 particles. (took 1.1243 sec) SUBFIND: ngb iteration 2: need to repeat for 133996968 particles. (took 0.977858 sec) SUBFIND: ngb iteration 3: need to repeat for 133996899 particles. (took 0.899779 sec) SUBFIND: ngb iteration 4: need to repeat for 133996835 particles. (took 0.856393 sec) SUBFIND: ngb iteration 5: need to repeat for 133996748 particles. (took 0.85159 sec) SUBFIND: ngb iteration 6: need to repeat for 133996676 particles. (took 0.866275 sec) SUBFIND: ngb iteration 7: need to repeat for 133996564 particles. (took 0.886176 sec) SUBFIND: ngb iteration 8: need to repeat for 133996472 particles. (took 0.919936 sec) SUBFIND: ngb iteration 9: need to repeat for 133991491 particles. (took 0.967979 sec) SUBFIND: ngb iteration 10: need to repeat for 133661857 particles. (took 1.02323 sec) SUBFIND: ngb iteration 11: need to repeat for 129964194 particles. (took 1.08485 sec) SUBFIND: ngb iteration 12: need to repeat for 122361594 particles. (took 1.11352 sec) SUBFIND: ngb iteration 13: need to repeat for 112016054 particles. (took 1.09825 sec) SUBFIND: ngb iteration 14: need to repeat for 100721557 particles. (took 1.05314 sec) SUBFIND: ngb iteration 15: need to repeat for 90615422 particles. (took 0.98942 sec) SUBFIND: ngb iteration 16: need to repeat for 82010196 particles. (took 0.927441 sec) SUBFIND: ngb iteration 17: need to repeat for 74115445 particles. (took 0.866174 sec) SUBFIND: ngb iteration 18: need to repeat for 66080555 particles. (took 0.798664 sec) SUBFIND: ngb iteration 19: need to repeat for 57086054 particles. (took 0.725058 sec) SUBFIND: ngb iteration 20: need to repeat for 46190260 particles. (took 0.637701 sec) SUBFIND: ngb iteration 21: need to repeat for 33567168 particles. (took 0.535781 sec) SUBFIND: ngb iteration 22: need to repeat for 20915089 particles. (took 0.410289 sec) SUBFIND: ngb iteration 23: need to repeat for 10549399 particles. (took 0.279667 sec) SUBFIND: ngb iteration 24: need to repeat for 4110184 particles. (took 0.159469 sec) SUBFIND: ngb iteration 25: need to repeat for 1141531 particles. (took 0.0727132 sec) SUBFIND: ngb iteration 26: need to repeat for 207561 particles. (took 0.0243255 sec) SUBFIND: ngb iteration 27: need to repeat for 23750 particles. (took 0.00591781 sec) SUBFIND: ngb iteration 28: need to repeat for 2188 particles. (took 0.0014096 sec) SUBFIND: ngb iteration 29: need to repeat for 772 particles. (took 0.00104669 sec) SUBFIND: ngb iteration 30: need to repeat for 691 particles. (took 0.00101265 sec) SUBFIND: ngb iteration 31: need to repeat for 684 particles. (took 0.00217318 sec) SUBFIND: ngb iteration 32: need to repeat for 661 particles. (took 0.00208944 sec) SUBFIND: ngb iteration 33: need to repeat for 615 particles. (took 0.00145553 sec) SUBFIND: ngb iteration 34: need to repeat for 511 particles. (took 0.00141978 sec) SUBFIND: ngb iteration 35: need to repeat for 424 particles. (took 0.00093318 sec) SUBFIND: ngb iteration 36: need to repeat for 331 particles. (took 0.0014035 sec) SUBFIND: ngb iteration 37: need to repeat for 206 particles. (took 0.000919422 sec) SUBFIND: ngb iteration 38: need to repeat for 176 particles. (took 0.00108188 sec) SUBFIND: ngb iteration 39: need to repeat for 165 particles. (took 0.00106957 sec) SUBFIND: ngb iteration 40: need to repeat for 143 particles. (took 0.00092775 sec) SUBFIND: ngb iteration 41: need to repeat for 93 particles. (took 0.000806654 sec) SUBFIND: ngb iteration 42: need to repeat for 1 particles. (took 0.000560874 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 20.1828 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133997492 particles, for threshold size factor 0.6) SUBFIND: The other 547130 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00247499 sec SUBFIND: particle balance=1.11893 SUBFIND: subfind_exchange() took 0.455938 sec SUBFIND: particle balance for processing=1.00039 SUBFIND: subdomain decomposition took 0.104764 sec SUBFIND: serial subfind subdomain decomposition took 0.10378 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1267 took 32.4495 sec SUBFIND: root-task=0: Serial processing of halo 0 took 32.7055 SUBFIND: Processing overall took (total time=32.935 sec) SUBFIND: 0 out of 56476 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 516968 ALLOCATE: Changing to MaxPartSph = 253786 SUBFIND: subfind_exchange() (for return to original CPU) took 0.521455 sec TREE: Full tree construction for all particles. (presently allocated=161.906 MB) GRAVTREE: Tree construction done. took 1.4437 sec =94659.6 NTopnodes=22297 NTopleaves=19510 tree-build-scalability=0.764996 SUBFIND: SO iteration 1: need to repeat for 547130 halo centers. (took 0.0229939 sec) SUBFIND: SO iteration 2: need to repeat for 547130 halo centers. (took 0.0179572 sec) SUBFIND: SO iteration 3: need to repeat for 547130 halo centers. (took 0.0162303 sec) SUBFIND: SO iteration 4: need to repeat for 547130 halo centers. (took 0.0196786 sec) SUBFIND: SO iteration 5: need to repeat for 547130 halo centers. (took 0.0195118 sec) SUBFIND: SO iteration 6: need to repeat for 547130 halo centers. (took 0.0177081 sec) SUBFIND: SO iteration 7: need to repeat for 547130 halo centers. (took 0.0158143 sec) SUBFIND: SO iteration 8: need to repeat for 547130 halo centers. (took 0.0186496 sec) SUBFIND: SO iteration 9: need to repeat for 547130 halo centers. (took 0.0188346 sec) SUBFIND: SO iteration 10: need to repeat for 547130 halo centers. (took 0.016403 sec) SUBFIND: SO iteration 11: need to repeat for 547130 halo centers. (took 0.0185716 sec) SUBFIND: SO iteration 12: need to repeat for 547130 halo centers. (took 0.0212903 sec) SUBFIND: SO iteration 13: need to repeat for 547130 halo centers. (took 0.017752 sec) SUBFIND: SO iteration 14: need to repeat for 547130 halo centers. (took 0.0170984 sec) SUBFIND: SO iteration 15: need to repeat for 547130 halo centers. (took 0.0179216 sec) SUBFIND: SO iteration 16: need to repeat for 6499 halo centers. (took 0.0165189 sec) SUBFIND: SO iteration 17: need to repeat for 63 halo centers. (took 0.00120115 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000171514 sec) SUBFIND: SO iteration 1: need to repeat for 547130 halo centers. (took 0.0175666 sec) SUBFIND: SO iteration 2: need to repeat for 547130 halo centers. (took 0.0167498 sec) SUBFIND: SO iteration 3: need to repeat for 547130 halo centers. (took 0.0156582 sec) SUBFIND: SO iteration 4: need to repeat for 547130 halo centers. (took 0.0158731 sec) SUBFIND: SO iteration 5: need to repeat for 547130 halo centers. (took 0.0165705 sec) SUBFIND: SO iteration 6: need to repeat for 547130 halo centers. (took 0.01522 sec) SUBFIND: SO iteration 7: need to repeat for 547130 halo centers. (took 0.0153194 sec) SUBFIND: SO iteration 8: need to repeat for 547130 halo centers. (took 0.0168383 sec) SUBFIND: SO iteration 9: need to repeat for 547130 halo centers. (took 0.0156882 sec) SUBFIND: SO iteration 10: need to repeat for 547130 halo centers. (took 0.0148398 sec) SUBFIND: SO iteration 11: need to repeat for 547130 halo centers. (took 0.0179235 sec) SUBFIND: SO iteration 12: need to repeat for 547130 halo centers. (took 0.0152068 sec) SUBFIND: SO iteration 13: need to repeat for 547130 halo centers. (took 0.0167507 sec) SUBFIND: SO iteration 14: need to repeat for 547130 halo centers. (took 0.0184806 sec) SUBFIND: SO iteration 15: need to repeat for 547130 halo centers. (took 0.0205006 sec) SUBFIND: SO iteration 16: need to repeat for 3162 halo centers. (took 0.0152999 sec) SUBFIND: SO iteration 17: need to repeat for 24 halo centers. (took 0.000671992 sec) SUBFIND: SO iteration 1: need to repeat for 547130 halo centers. (took 0.017565 sec) SUBFIND: SO iteration 2: need to repeat for 547130 halo centers. (took 0.0191953 sec) SUBFIND: SO iteration 3: need to repeat for 547130 halo centers. (took 0.0156482 sec) SUBFIND: SO iteration 4: need to repeat for 547130 halo centers. (took 0.0165207 sec) SUBFIND: SO iteration 5: need to repeat for 547130 halo centers. (took 0.0205572 sec) SUBFIND: SO iteration 6: need to repeat for 547130 halo centers. (took 0.0226646 sec) SUBFIND: SO iteration 7: need to repeat for 547130 halo centers. (took 0.0155781 sec) SUBFIND: SO iteration 8: need to repeat for 547130 halo centers. (took 0.0149808 sec) SUBFIND: SO iteration 9: need to repeat for 547130 halo centers. (took 0.0149315 sec) SUBFIND: SO iteration 10: need to repeat for 547130 halo centers. (took 0.0154295 sec) SUBFIND: SO iteration 11: need to repeat for 547130 halo centers. (took 0.015707 sec) SUBFIND: SO iteration 12: need to repeat for 547130 halo centers. (took 0.0159318 sec) SUBFIND: SO iteration 13: need to repeat for 547130 halo centers. (took 0.0159003 sec) SUBFIND: SO iteration 14: need to repeat for 547130 halo centers. (took 0.015044 sec) SUBFIND: SO iteration 15: need to repeat for 547130 halo centers. (took 0.014955 sec) SUBFIND: SO iteration 16: need to repeat for 6702 halo centers. (took 0.0149164 sec) SUBFIND: SO iteration 17: need to repeat for 64 halo centers. (took 0.00107776 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000148386 sec) SUBFIND: SO iteration 1: need to repeat for 547130 halo centers. (took 0.0148748 sec) SUBFIND: SO iteration 2: need to repeat for 547130 halo centers. (took 0.0160695 sec) SUBFIND: SO iteration 3: need to repeat for 547130 halo centers. (took 0.0152636 sec) SUBFIND: SO iteration 4: need to repeat for 547130 halo centers. (took 0.0158202 sec) SUBFIND: SO iteration 5: need to repeat for 547130 halo centers. (took 0.0156628 sec) SUBFIND: SO iteration 6: need to repeat for 547130 halo centers. (took 0.0158366 sec) SUBFIND: SO iteration 7: need to repeat for 547130 halo centers. (took 0.0157272 sec) SUBFIND: SO iteration 8: need to repeat for 547130 halo centers. (took 0.0157223 sec) SUBFIND: SO iteration 9: need to repeat for 547130 halo centers. (took 0.0174728 sec) SUBFIND: SO iteration 10: need to repeat for 547130 halo centers. (took 0.0156678 sec) SUBFIND: SO iteration 11: need to repeat for 547130 halo centers. (took 0.0186736 sec) SUBFIND: SO iteration 12: need to repeat for 547130 halo centers. (took 0.0157313 sec) SUBFIND: SO iteration 13: need to repeat for 547130 halo centers. (took 0.0171707 sec) SUBFIND: SO iteration 14: need to repeat for 547130 halo centers. (took 0.0183398 sec) SUBFIND: SO iteration 15: need to repeat for 547130 halo centers. (took 0.0192514 sec) SUBFIND: SO iteration 16: need to repeat for 282431 halo centers. (took 0.0171367 sec) SUBFIND: SO iteration 17: need to repeat for 6637 halo centers. (took 0.0108445 sec) SUBFIND: SO iteration 18: need to repeat for 197 halo centers. (took 0.00159081 sec) SUBFIND: SO iteration 19: need to repeat for 1 halo centers. (took 0.000205217 sec) SUBFIND: determining spherical overdensity masses took 1.10622 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0779084 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 1.52529 sec, total size 216.147 MB, corresponds to effective I/O rate of 141.709 MB/sec SUBFIND: Subgroup catalogues saved. took = 1.5262 sec SUBFIND: Finished with SUBFIND. (total time=58.8434 sec) SUBFIND: Total number of subhalos with at least 20 particles: 603482 SUBFIND: Largest subhalo has 247 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133997492 FOF: preparing output order of particles took 1.3743 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.33679 sec, total size 5353.25 MB, corresponds to effective I/O rate of 642.123 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 321 (rank 321 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.