TACC: Starting up job 4242052 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 16 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 432 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186315.49 Mb (on task= 162), Smallest = 186208.90 Mb (on task= 0), Average = 186276.40 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5177.99 Mb (on task= 0), Smallest = 5071.40 Mb (on task= 162), Average = 5110.49 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5177.99 Mb (on task= 0), Smallest = 5071.40 Mb (on task= 162), Average = 5110.49 Mb avail /dev/shm: Largest = 95257.31 Mb (on task= 81), Smallest = 95257.25 Mb (on task= 48), Average = 95257.29 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-006.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.3644 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_208.hdf5' contains: READIC: Type 0 (gas): 50977047 (tot= 50977047) masstab= 0 READIC: Type 1: 51411851 (tot= 51411851) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 31609869 (tot= 31609869) masstab= 0 READIC: Type 5: 3177 (tot= 3177) masstab= 0 READIC: Reading file `output/snap_208.hdf5' on task=0 and distribute it to 0 to 431. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.40408 sec, total size 6328.58 MB, corresponds to effective I/O rate of 1436.98 MB/sec READIC: Total number of particles : 134001944 INIT: Testing ID uniqueness... INIT: success. took=0.0762656 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: Increasing TopNodeAllocFactor=6.92033 new value=8.99643 DOMAIN: Increasing TopNodeAllocFactor=8.99643 new value=11.6954 DOMAIN: Increasing TopNodeAllocFactor=11.6954 new value=15.204 DOMAIN: Increasing TopNodeAllocFactor=15.204 new value=19.7652 DOMAIN: Increasing TopNodeAllocFactor=19.7652 new value=25.6947 DOMAIN: NTopleaves=83728, determination of top-level tree involved 17 iterations and took 0.945203 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=432, nnodes=16 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=218 for nextra=98, reaching maximum imbalance of 1.15266|1.15325 DOMAIN: combining multiple-domains took 0.024933 sec DOMAIN: exchange of 83024897 particles DOMAIN: particle exchange done. (took 0.357112 sec) DOMAIN: domain decomposition done. (took in total 1.33775 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0748025 sec. INIT: Converting u -> entropy All.cf_a3inv=512 FOF: Begin to compute FoF group catalogue... (presently allocated=163.885 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.147803 sec =115847 NTopnodes=95689 NTopleaves=83728 FOF: Start linking particles (presently allocated=180.593 MB) FOF: linking of small cells took 0.00264054 sec FOF: local links done (took 0.325763 sec, avg-work=0.225429, imbalance=1.43595). FOF: Marked=10524415 out of the 51411851 primaries which are linked FOF: begin linking across processors (presently allocated=182.633 MB) FOF: have done 84360 cross links (processed 10524415, took 0.063321 sec) FOF: have done 59333 cross links (processed 6941075, took 0.0590644 sec) FOF: have done 24142 cross links (processed 2068911, took 0.0446785 sec) FOF: have done 8473 cross links (processed 575339, took 0.025837 sec) FOF: have done 3057 cross links (processed 218375, took 0.0251619 sec) FOF: have done 1459 cross links (processed 152707, took 0.0244429 sec) FOF: have done 719 cross links (processed 58347, took 0.0127858 sec) FOF: have done 272 cross links (processed 15023, took 0.00690275 sec) FOF: have done 68 cross links (processed 2189, took 0.00553461 sec) FOF: have done 19 cross links (processed 260, took 0.00480224 sec) FOF: have done 6 cross links (processed 76, took 0.00471836 sec) FOF: have done 1 cross links (processed 15, took 0.00465585 sec) FOF: have done 0 cross links (processed 2, took 0.00479753 sec) FOF: Local groups found. FOF: primary group finding took = 0.627972 sec FOF: Start finding nearest dm-particle (presently allocated=180.593 MB) FOF: fof-nearest iteration 1: need to repeat for 45034432 particles. (took = 0.64795 sec) FOF: fof-nearest iteration 2: need to repeat for 28861120 particles. (took = 0.197925 sec) FOF: fof-nearest iteration 3: need to repeat for 12512988 particles. (took = 0.160595 sec) FOF: fof-nearest iteration 4: need to repeat for 2133584 particles. (took = 0.10075 sec) FOF: fof-nearest iteration 5: need to repeat for 572862 particles. (took = 0.0211522 sec) FOF: fof-nearest iteration 6: need to repeat for 535891 particles. (took = 0.00380077 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 1.14363 sec FOF: compiling local group data and catalogue took = 0.0254561 sec FOF: Total number of FOF groups with at least 32 particles: 1298 FOF: Largest FOF group has 1219082 particles. FOF: Total number of particles in FOF groups: 133467211 FOF: group properties are now allocated.. (presently allocated=169.037 MB) FOF: computation of group properties took = 0.00771616 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.0602458 sec FOF: Finished computing FoF groups. Complete work took 2.05233 sec (presently allocated=163.886 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=167.008 MB) GRAVTREE: Tree construction done. took 0.737744 sec =147113 NTopnodes=95689 NTopleaves=83728 tree-build-scalability=0.35106 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 130119864 particles. (took 27.0988 sec) SUBFIND: ngb iteration 2: need to repeat for 124492431 particles. (took 26.4619 sec) SUBFIND: ngb iteration 3: need to repeat for 114793250 particles. (took 33.2207 sec) SUBFIND: ngb iteration 4: need to repeat for 97075237 particles. (took 38.5588 sec) SUBFIND: ngb iteration 5: need to repeat for 75076939 particles. (took 36.3332 sec) SUBFIND: ngb iteration 6: need to repeat for 58595940 particles. (took 29.8817 sec) SUBFIND: ngb iteration 7: need to repeat for 48907466 particles. (took 21.237 sec) SUBFIND: ngb iteration 8: need to repeat for 43154431 particles. (took 13.5463 sec) SUBFIND: ngb iteration 9: need to repeat for 38911277 particles. (took 7.00076 sec) SUBFIND: ngb iteration 10: need to repeat for 34770171 particles. (took 2.96357 sec) SUBFIND: ngb iteration 11: need to repeat for 30142553 particles. (took 1.41721 sec) SUBFIND: ngb iteration 12: need to repeat for 24916005 particles. (took 1.10444 sec) SUBFIND: ngb iteration 13: need to repeat for 19290055 particles. (took 0.922884 sec) SUBFIND: ngb iteration 14: need to repeat for 13778305 particles. (took 0.735694 sec) SUBFIND: ngb iteration 15: need to repeat for 8815707 particles. (took 0.52364 sec) SUBFIND: ngb iteration 16: need to repeat for 4826919 particles. (took 0.328082 sec) SUBFIND: ngb iteration 17: need to repeat for 2181904 particles. (took 0.182061 sec) SUBFIND: ngb iteration 18: need to repeat for 814067 particles. (took 0.0852633 sec) SUBFIND: ngb iteration 19: need to repeat for 259339 particles. (took 0.035211 sec) SUBFIND: ngb iteration 20: need to repeat for 71840 particles. (took 0.0145869 sec) SUBFIND: ngb iteration 21: need to repeat for 17777 particles. (took 0.00748597 sec) SUBFIND: ngb iteration 22: need to repeat for 3969 particles. (took 0.0046228 sec) SUBFIND: ngb iteration 23: need to repeat for 945 particles. (took 0.0032242 sec) SUBFIND: ngb iteration 24: need to repeat for 330 particles. (took 0.00225659 sec) SUBFIND: ngb iteration 25: need to repeat for 149 particles. (took 0.001582 sec) SUBFIND: ngb iteration 26: need to repeat for 80 particles. (took 0.00105985 sec) SUBFIND: ngb iteration 27: need to repeat for 32 particles. (took 0.000674465 sec) SUBFIND: ngb iteration 28: need to repeat for 4 particles. (took 0.000338593 sec) SUBFIND: ngb iteration 29: need to repeat for 1 particles. (took 0.000137492 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 241.682 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134001944 particles, for threshold size factor 0.6) SUBFIND: The other 1298 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.000112098 sec SUBFIND: particle balance=1.15266 ALLOCATE: Changing to MaxPartSph = 818833 ALLOCATE: Changing to MaxPart = 1187675 ALLOCATE: Changing to MaxPart = 2443590 SUBFIND: subfind_exchange() took 1.05954 sec SUBFIND: particle balance for processing=4.72664 SUBFIND: subdomain decomposition took 0.534444 sec SUBFIND: serial subfind subdomain decomposition took 0.52818 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=4 took 340.96 sec SUBFIND: root-task=0: Serial processing of halo 0 took 342.255 SUBFIND: Processing overall took (total time=342.255 sec) SUBFIND: 0 out of 120989 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 2443590 ALLOCATE: Changing to MaxPartSph = 818833 ALLOCATE: Changing to MaxPartSph = 226526 ALLOCATE: Changing to MaxPart = 595906 SUBFIND: subfind_exchange() (for return to original CPU) took 1.659 sec TREE: Full tree construction for all particles. (presently allocated=189.852 MB) GRAVTREE: Tree construction done. took 1.16848 sec =147113 NTopnodes=95689 NTopleaves=83728 tree-build-scalability=0.35106 SUBFIND: SO iteration 1: need to repeat for 1298 halo centers. (took 0.00269714 sec) SUBFIND: SO iteration 2: need to repeat for 1298 halo centers. (took 0.00276649 sec) SUBFIND: SO iteration 3: need to repeat for 1298 halo centers. (took 0.00212079 sec) SUBFIND: SO iteration 4: need to repeat for 1298 halo centers. (took 0.00166359 sec) SUBFIND: SO iteration 5: need to repeat for 1298 halo centers. (took 0.00160178 sec) SUBFIND: SO iteration 6: need to repeat for 1298 halo centers. (took 0.00128662 sec) SUBFIND: SO iteration 7: need to repeat for 1298 halo centers. (took 0.00119276 sec) SUBFIND: SO iteration 8: need to repeat for 1298 halo centers. (took 0.00108495 sec) SUBFIND: SO iteration 9: need to repeat for 1298 halo centers. (took 0.0010623 sec) SUBFIND: SO iteration 10: need to repeat for 1298 halo centers. (took 0.00105729 sec) SUBFIND: SO iteration 11: need to repeat for 1298 halo centers. (took 0.00104092 sec) SUBFIND: SO iteration 12: need to repeat for 1298 halo centers. (took 0.00104245 sec) SUBFIND: SO iteration 13: need to repeat for 1298 halo centers. (took 0.00121596 sec) SUBFIND: SO iteration 14: need to repeat for 1298 halo centers. (took 0.00104341 sec) SUBFIND: SO iteration 15: need to repeat for 1298 halo centers. (took 0.00106028 sec) SUBFIND: SO iteration 16: need to repeat for 20 halo centers. (took 0.00105112 sec) SUBFIND: SO iteration 1: need to repeat for 1298 halo centers. (took 0.00131229 sec) SUBFIND: SO iteration 2: need to repeat for 1298 halo centers. (took 0.00171273 sec) SUBFIND: SO iteration 3: need to repeat for 1298 halo centers. (took 0.00141945 sec) SUBFIND: SO iteration 4: need to repeat for 1298 halo centers. (took 0.00121828 sec) SUBFIND: SO iteration 5: need to repeat for 1298 halo centers. (took 0.00115812 sec) SUBFIND: SO iteration 6: need to repeat for 1298 halo centers. (took 0.00111898 sec) SUBFIND: SO iteration 7: need to repeat for 1298 halo centers. (took 0.00104503 sec) SUBFIND: SO iteration 8: need to repeat for 1298 halo centers. (took 0.00100102 sec) SUBFIND: SO iteration 9: need to repeat for 1298 halo centers. (took 0.000983125 sec) SUBFIND: SO iteration 10: need to repeat for 1298 halo centers. (took 0.000974423 sec) SUBFIND: SO iteration 11: need to repeat for 1298 halo centers. (took 0.000976087 sec) SUBFIND: SO iteration 12: need to repeat for 1298 halo centers. (took 0.000981032 sec) SUBFIND: SO iteration 13: need to repeat for 1298 halo centers. (took 0.000978851 sec) SUBFIND: SO iteration 14: need to repeat for 1298 halo centers. (took 0.000978489 sec) SUBFIND: SO iteration 15: need to repeat for 1298 halo centers. (took 0.000982156 sec) SUBFIND: SO iteration 16: need to repeat for 9 halo centers. (took 0.000977483 sec) SUBFIND: SO iteration 1: need to repeat for 1298 halo centers. (took 0.00143112 sec) SUBFIND: SO iteration 2: need to repeat for 1298 halo centers. (took 0.0019915 sec) SUBFIND: SO iteration 3: need to repeat for 1298 halo centers. (took 0.00161795 sec) SUBFIND: SO iteration 4: need to repeat for 1298 halo centers. (took 0.00128805 sec) SUBFIND: SO iteration 5: need to repeat for 1298 halo centers. (took 0.00132877 sec) SUBFIND: SO iteration 6: need to repeat for 1298 halo centers. (took 0.00117875 sec) SUBFIND: SO iteration 7: need to repeat for 1298 halo centers. (took 0.00113263 sec) SUBFIND: SO iteration 8: need to repeat for 1298 halo centers. (took 0.00110746 sec) SUBFIND: SO iteration 9: need to repeat for 1298 halo centers. (took 0.00109238 sec) SUBFIND: SO iteration 10: need to repeat for 1298 halo centers. (took 0.00106865 sec) SUBFIND: SO iteration 11: need to repeat for 1298 halo centers. (took 0.00105973 sec) SUBFIND: SO iteration 12: need to repeat for 1298 halo centers. (took 0.00104927 sec) SUBFIND: SO iteration 13: need to repeat for 1298 halo centers. (took 0.00104545 sec) SUBFIND: SO iteration 14: need to repeat for 1298 halo centers. (took 0.00104385 sec) SUBFIND: SO iteration 15: need to repeat for 1298 halo centers. (took 0.0010494 sec) SUBFIND: SO iteration 16: need to repeat for 20 halo centers. (took 0.001046 sec) SUBFIND: SO iteration 1: need to repeat for 1298 halo centers. (took 0.00132761 sec) SUBFIND: SO iteration 2: need to repeat for 1298 halo centers. (took 0.00294471 sec) SUBFIND: SO iteration 3: need to repeat for 1298 halo centers. (took 0.00198068 sec) SUBFIND: SO iteration 4: need to repeat for 1298 halo centers. (took 0.0020643 sec) SUBFIND: SO iteration 5: need to repeat for 1298 halo centers. (took 0.00177163 sec) SUBFIND: SO iteration 6: need to repeat for 1298 halo centers. (took 0.00171221 sec) SUBFIND: SO iteration 7: need to repeat for 1298 halo centers. (took 0.00166332 sec) SUBFIND: SO iteration 8: need to repeat for 1298 halo centers. (took 0.00165511 sec) SUBFIND: SO iteration 9: need to repeat for 1298 halo centers. (took 0.00164511 sec) SUBFIND: SO iteration 10: need to repeat for 1298 halo centers. (took 0.00175258 sec) SUBFIND: SO iteration 11: need to repeat for 1298 halo centers. (took 0.00163158 sec) SUBFIND: SO iteration 12: need to repeat for 1298 halo centers. (took 0.00165774 sec) SUBFIND: SO iteration 13: need to repeat for 1298 halo centers. (took 0.00160924 sec) SUBFIND: SO iteration 14: need to repeat for 1298 halo centers. (took 0.00165924 sec) SUBFIND: SO iteration 15: need to repeat for 1298 halo centers. (took 0.00164138 sec) SUBFIND: SO iteration 16: need to repeat for 669 halo centers. (took 0.00161928 sec) SUBFIND: SO iteration 17: need to repeat for 3 halo centers. (took 0.00120427 sec) SUBFIND: determining spherical overdensity masses took 0.0915582 sec SUBFIND: assembled and ordered groups and subhalos (took 0.0488817 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_208' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 0.849726 sec, total size 18.8937 MB, corresponds to effective I/O rate of 22.235 MB/sec SUBFIND: Subgroup catalogues saved. took = 0.850359 sec SUBFIND: Finished with SUBFIND. (total time=589.609 sec) SUBFIND: Total number of subhalos with at least 20 particles: 90662 SUBFIND: Largest subhalo has 546755 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133467211 FOF: preparing output order of particles took 1.433 sec SNAPSHOT: writing snapshot file #208 @ time 0.125 ... SNAPSHOT: writing snapshot file: 'output/snap_208' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_208.hdf5' to 'output/bak-snap_208.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.97486 sec, total size 5183.98 MB, corresponds to effective I/O rate of 650.04 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 119 (rank 119 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 386 (rank 386 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.