TACC: Starting up job 4245022 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186310.84 Mb (on task= 108), Smallest = 186199.30 Mb (on task= 0), Average = 186281.20 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5187.59 Mb (on task= 0), Smallest = 5076.05 Mb (on task= 108), Average = 5105.68 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5187.59 Mb (on task= 0), Smallest = 5076.05 Mb (on task= 108), Average = 5105.68 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 373), Average = 95257.24 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-006.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 18.4085 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 65677919 (tot= 65677919) masstab= 0 READIC: Type 1: 68079040 (tot= 68079040) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 71888 (tot= 71888) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.70806 sec, total size 6376.74 MB, corresponds to effective I/O rate of 1354.43 MB/sec READIC: Total number of particles : 133828847 INIT: Testing ID uniqueness... INIT: success. took=0.060938 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=30143, determination of top-level tree involved 5 iterations and took 0.459786 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=166 for nextra=75, reaching maximum imbalance of 1.10411|1.1043 DOMAIN: combining multiple-domains took 0.0161889 sec DOMAIN: exchange of 68150928 particles DOMAIN: particle exchange done. (took 0.303102 sec) DOMAIN: domain decomposition done. (took in total 0.786539 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0467026 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=116.093 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.112964 sec =68711.1 NTopnodes=34449 NTopleaves=30143 FOF: Start linking particles (presently allocated=128.922 MB) FOF: linking of small cells took 0.00125775 sec FOF: local links done (took 0.103268 sec, avg-work=0.0928422, imbalance=1.10467). FOF: Marked=163442 out of the 68079040 primaries which are linked FOF: begin linking across processors (presently allocated=130.21 MB) FOF: have done 10981 cross links (processed 163442, took 0.00461444 sec) FOF: have done 2722 cross links (processed 83621, took 0.00382571 sec) FOF: have done 447 cross links (processed 12223, took 0.00326294 sec) FOF: have done 78 cross links (processed 1793, took 0.00305586 sec) FOF: have done 16 cross links (processed 353, took 0.00299262 sec) FOF: have done 3 cross links (processed 90, took 0.00301338 sec) FOF: have done 2 cross links (processed 24, took 0.00295411 sec) FOF: have done 0 cross links (processed 4, took 0.00293025 sec) FOF: Local groups found. FOF: primary group finding took = 0.137484 sec FOF: Start finding nearest dm-particle (presently allocated=128.922 MB) FOF: fof-nearest iteration 1: need to repeat for 63726493 particles. (took = 0.067622 sec) FOF: fof-nearest iteration 2: need to repeat for 54045188 particles. (took = 0.0767375 sec) FOF: fof-nearest iteration 3: need to repeat for 30632426 particles. (took = 0.0832062 sec) FOF: fof-nearest iteration 4: need to repeat for 9681338 particles. (took = 0.0585355 sec) FOF: fof-nearest iteration 5: need to repeat for 1338318 particles. (took = 0.0240185 sec) FOF: fof-nearest iteration 6: need to repeat for 30940 particles. (took = 0.0060819 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.321802 sec FOF: compiling local group data and catalogue took = 0.016998 sec FOF: Total number of FOF groups with at least 32 particles: 943934 FOF: Largest FOF group has 143 particles. FOF: Total number of particles in FOF groups: 133828847 FOF: group properties are now allocated.. (presently allocated=119.911 MB) FOF: computation of group properties took = 0.00660813 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.156795 sec FOF: Finished computing FoF groups. Complete work took 0.834225 sec (presently allocated=116.626 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.766 MB) GRAVTREE: Tree construction done. took 0.348344 sec =89028.2 NTopnodes=34449 NTopleaves=30143 tree-build-scalability=0.613652 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 131735222 particles. (took 0.61134 sec) SUBFIND: ngb iteration 2: need to repeat for 130616762 particles. (took 0.495089 sec) SUBFIND: ngb iteration 3: need to repeat for 129635697 particles. (took 0.434432 sec) SUBFIND: ngb iteration 4: need to repeat for 128855603 particles. (took 0.39794 sec) SUBFIND: ngb iteration 5: need to repeat for 128260944 particles. (took 0.382669 sec) SUBFIND: ngb iteration 6: need to repeat for 127813597 particles. (took 0.377503 sec) SUBFIND: ngb iteration 7: need to repeat for 127440097 particles. (took 0.382985 sec) SUBFIND: ngb iteration 8: need to repeat for 127119478 particles. (took 0.392328 sec) SUBFIND: ngb iteration 9: need to repeat for 126866123 particles. (took 0.409571 sec) SUBFIND: ngb iteration 10: need to repeat for 126684261 particles. (took 0.429366 sec) SUBFIND: ngb iteration 11: need to repeat for 126499685 particles. (took 0.449978 sec) SUBFIND: ngb iteration 12: need to repeat for 125021251 particles. (took 0.470228 sec) SUBFIND: ngb iteration 13: need to repeat for 117557540 particles. (took 0.485184 sec) SUBFIND: ngb iteration 14: need to repeat for 104137693 particles. (took 0.473788 sec) SUBFIND: ngb iteration 15: need to repeat for 88507554 particles. (took 0.432803 sec) SUBFIND: ngb iteration 16: need to repeat for 72488333 particles. (took 0.37859 sec) SUBFIND: ngb iteration 17: need to repeat for 56272488 particles. (took 0.319786 sec) SUBFIND: ngb iteration 18: need to repeat for 39859150 particles. (took 0.264797 sec) SUBFIND: ngb iteration 19: need to repeat for 24614824 particles. (took 0.21086 sec) SUBFIND: ngb iteration 20: need to repeat for 12926331 particles. (took 0.155601 sec) SUBFIND: ngb iteration 21: need to repeat for 5833915 particles. (took 0.0988359 sec) SUBFIND: ngb iteration 22: need to repeat for 2522402 particles. (took 0.051969 sec) SUBFIND: ngb iteration 23: need to repeat for 1322400 particles. (took 0.0232433 sec) SUBFIND: ngb iteration 24: need to repeat for 999166 particles. (took 0.00940902 sec) SUBFIND: ngb iteration 25: need to repeat for 932336 particles. (took 0.00621851 sec) SUBFIND: ngb iteration 26: need to repeat for 910883 particles. (took 0.00647381 sec) SUBFIND: ngb iteration 27: need to repeat for 890098 particles. (took 0.00629462 sec) SUBFIND: ngb iteration 28: need to repeat for 863382 particles. (took 0.00681983 sec) SUBFIND: ngb iteration 29: need to repeat for 828975 particles. (took 0.00731272 sec) SUBFIND: ngb iteration 30: need to repeat for 787343 particles. (took 0.00770446 sec) SUBFIND: ngb iteration 31: need to repeat for 735472 particles. (took 0.0077836 sec) SUBFIND: ngb iteration 32: need to repeat for 674029 particles. (took 0.00795382 sec) SUBFIND: ngb iteration 33: need to repeat for 600307 particles. (took 0.00795153 sec) SUBFIND: ngb iteration 34: need to repeat for 517138 particles. (took 0.00789911 sec) SUBFIND: ngb iteration 35: need to repeat for 427348 particles. (took 0.00709431 sec) SUBFIND: ngb iteration 36: need to repeat for 336185 particles. (took 0.00620108 sec) SUBFIND: ngb iteration 37: need to repeat for 249273 particles. (took 0.00494272 sec) SUBFIND: ngb iteration 38: need to repeat for 172078 particles. (took 0.00418319 sec) SUBFIND: ngb iteration 39: need to repeat for 109315 particles. (took 0.00340408 sec) SUBFIND: ngb iteration 40: need to repeat for 62808 particles. (took 0.00223998 sec) SUBFIND: ngb iteration 41: need to repeat for 30843 particles. (took 0.00161605 sec) SUBFIND: ngb iteration 42: need to repeat for 13247 particles. (took 0.0013 sec) SUBFIND: ngb iteration 43: need to repeat for 4422 particles. (took 0.000934891 sec) SUBFIND: ngb iteration 44: need to repeat for 1138 particles. (took 0.000655965 sec) SUBFIND: ngb iteration 45: need to repeat for 214 particles. (took 0.000491489 sec) SUBFIND: ngb iteration 46: need to repeat for 1 particles. (took 0.000311255 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 8.24889 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828847 particles, for threshold size factor 0.6) SUBFIND: The other 943934 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00270267 sec SUBFIND: particle balance=1.10074 SUBFIND: subfind_exchange() took 0.374677 sec SUBFIND: particle balance for processing=1.00022 SUBFIND: subdomain decomposition took 0.0692576 sec SUBFIND: serial subfind subdomain decomposition took 0.0682021 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1457 took 21.9885 sec SUBFIND: root-task=0: Serial processing of halo 0 took 22.157 SUBFIND: Processing overall took (total time=23.3033 sec) SUBFIND: 0 out of 6100 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344211 ALLOCATE: Changing to MaxPartSph = 168925 SUBFIND: subfind_exchange() (for return to original CPU) took 0.408789 sec TREE: Full tree construction for all particles. (presently allocated=107.695 MB) GRAVTREE: Tree construction done. took 0.989187 sec =89028.2 NTopnodes=34449 NTopleaves=30143 tree-build-scalability=0.613652 SUBFIND: SO iteration 1: need to repeat for 943934 halo centers. (took 0.0183003 sec) SUBFIND: SO iteration 2: need to repeat for 943934 halo centers. (took 0.0162539 sec) SUBFIND: SO iteration 3: need to repeat for 943934 halo centers. (took 0.0164122 sec) SUBFIND: SO iteration 4: need to repeat for 943934 halo centers. (took 0.0158771 sec) SUBFIND: SO iteration 5: need to repeat for 943934 halo centers. (took 0.016006 sec) SUBFIND: SO iteration 6: need to repeat for 943934 halo centers. (took 0.0157375 sec) SUBFIND: SO iteration 7: need to repeat for 943934 halo centers. (took 0.0157103 sec) SUBFIND: SO iteration 8: need to repeat for 943934 halo centers. (took 0.0157116 sec) SUBFIND: SO iteration 9: need to repeat for 943934 halo centers. (took 0.0157364 sec) SUBFIND: SO iteration 10: need to repeat for 943934 halo centers. (took 0.015686 sec) SUBFIND: SO iteration 11: need to repeat for 943934 halo centers. (took 0.0156891 sec) SUBFIND: SO iteration 12: need to repeat for 943934 halo centers. (took 0.0156843 sec) SUBFIND: SO iteration 13: need to repeat for 943934 halo centers. (took 0.0157326 sec) SUBFIND: SO iteration 14: need to repeat for 943934 halo centers. (took 0.0156649 sec) SUBFIND: SO iteration 15: need to repeat for 943934 halo centers. (took 0.015732 sec) SUBFIND: SO iteration 16: need to repeat for 23188 halo centers. (took 0.0153833 sec) SUBFIND: SO iteration 17: need to repeat for 149 halo centers. (took 0.00210033 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000191691 sec) SUBFIND: SO iteration 1: need to repeat for 943934 halo centers. (took 0.0156488 sec) SUBFIND: SO iteration 2: need to repeat for 943934 halo centers. (took 0.0153234 sec) SUBFIND: SO iteration 3: need to repeat for 943934 halo centers. (took 0.0155965 sec) SUBFIND: SO iteration 4: need to repeat for 943934 halo centers. (took 0.0155487 sec) SUBFIND: SO iteration 5: need to repeat for 943934 halo centers. (took 0.0156287 sec) SUBFIND: SO iteration 6: need to repeat for 943934 halo centers. (took 0.0155799 sec) SUBFIND: SO iteration 7: need to repeat for 943934 halo centers. (took 0.0155884 sec) SUBFIND: SO iteration 8: need to repeat for 943934 halo centers. (took 0.0155893 sec) SUBFIND: SO iteration 9: need to repeat for 943934 halo centers. (took 0.0155759 sec) SUBFIND: SO iteration 10: need to repeat for 943934 halo centers. (took 0.0156016 sec) SUBFIND: SO iteration 11: need to repeat for 943934 halo centers. (took 0.015631 sec) SUBFIND: SO iteration 12: need to repeat for 943934 halo centers. (took 0.0156333 sec) SUBFIND: SO iteration 13: need to repeat for 943934 halo centers. (took 0.0155681 sec) SUBFIND: SO iteration 14: need to repeat for 943934 halo centers. (took 0.0156148 sec) SUBFIND: SO iteration 15: need to repeat for 943934 halo centers. (took 0.0155745 sec) SUBFIND: SO iteration 16: need to repeat for 11874 halo centers. (took 0.0153154 sec) SUBFIND: SO iteration 17: need to repeat for 37 halo centers. (took 0.00123119 sec) SUBFIND: SO iteration 1: need to repeat for 943934 halo centers. (took 0.0156564 sec) SUBFIND: SO iteration 2: need to repeat for 943934 halo centers. (took 0.0159675 sec) SUBFIND: SO iteration 3: need to repeat for 943934 halo centers. (took 0.0159391 sec) SUBFIND: SO iteration 4: need to repeat for 943934 halo centers. (took 0.0157417 sec) SUBFIND: SO iteration 5: need to repeat for 943934 halo centers. (took 0.0157268 sec) SUBFIND: SO iteration 6: need to repeat for 943934 halo centers. (took 0.0156253 sec) SUBFIND: SO iteration 7: need to repeat for 943934 halo centers. (took 0.015667 sec) SUBFIND: SO iteration 8: need to repeat for 943934 halo centers. (took 0.0155947 sec) SUBFIND: SO iteration 9: need to repeat for 943934 halo centers. (took 0.0156403 sec) SUBFIND: SO iteration 10: need to repeat for 943934 halo centers. (took 0.0156572 sec) SUBFIND: SO iteration 11: need to repeat for 943934 halo centers. (took 0.015677 sec) SUBFIND: SO iteration 12: need to repeat for 943934 halo centers. (took 0.0156754 sec) SUBFIND: SO iteration 13: need to repeat for 943934 halo centers. (took 0.0156258 sec) SUBFIND: SO iteration 14: need to repeat for 943934 halo centers. (took 0.0156665 sec) SUBFIND: SO iteration 15: need to repeat for 943934 halo centers. (took 0.0156174 sec) SUBFIND: SO iteration 16: need to repeat for 23621 halo centers. (took 0.0153895 sec) SUBFIND: SO iteration 17: need to repeat for 153 halo centers. (took 0.002102 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000193194 sec) SUBFIND: SO iteration 1: need to repeat for 943934 halo centers. (took 0.0156293 sec) SUBFIND: SO iteration 2: need to repeat for 943934 halo centers. (took 0.0161133 sec) SUBFIND: SO iteration 3: need to repeat for 943934 halo centers. (took 0.0156131 sec) SUBFIND: SO iteration 4: need to repeat for 943934 halo centers. (took 0.0158793 sec) SUBFIND: SO iteration 5: need to repeat for 943934 halo centers. (took 0.0158713 sec) SUBFIND: SO iteration 6: need to repeat for 943934 halo centers. (took 0.0158676 sec) SUBFIND: SO iteration 7: need to repeat for 943934 halo centers. (took 0.015931 sec) SUBFIND: SO iteration 8: need to repeat for 943934 halo centers. (took 0.0160604 sec) SUBFIND: SO iteration 9: need to repeat for 943934 halo centers. (took 0.0159391 sec) SUBFIND: SO iteration 10: need to repeat for 943934 halo centers. (took 0.0173496 sec) SUBFIND: SO iteration 11: need to repeat for 943934 halo centers. (took 0.0166544 sec) SUBFIND: SO iteration 12: need to repeat for 943934 halo centers. (took 0.0166126 sec) SUBFIND: SO iteration 13: need to repeat for 943934 halo centers. (took 0.0171987 sec) SUBFIND: SO iteration 14: need to repeat for 943934 halo centers. (took 0.0169264 sec) SUBFIND: SO iteration 15: need to repeat for 943934 halo centers. (took 0.0168215 sec) SUBFIND: SO iteration 16: need to repeat for 558903 halo centers. (took 0.0170201 sec) SUBFIND: SO iteration 17: need to repeat for 23791 halo centers. (took 0.0132512 sec) SUBFIND: SO iteration 18: need to repeat for 636 halo centers. (took 0.00236846 sec) SUBFIND: determining spherical overdensity masses took 1.04159 sec SUBFIND: assembled and ordered groups and subhalos (took 0.177234 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.09862 sec, total size 354.129 MB, corresponds to effective I/O rate of 168.743 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.09964 sec SUBFIND: Finished with SUBFIND. (total time=37.0701 sec) SUBFIND: Total number of subhalos with at least 20 particles: 949993 SUBFIND: Largest subhalo has 143 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133828847 FOF: preparing output order of particles took 1.25923 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.43732 sec, total size 5346.27 MB, corresponds to effective I/O rate of 633.646 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 607 (rank 607 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 600 (rank 600 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.