TACC: Starting up job 4245022 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186317.92 Mb (on task= 162), Smallest = 186207.07 Mb (on task= 0), Average = 186281.63 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5179.82 Mb (on task= 0), Smallest = 5068.96 Mb (on task= 162), Average = 5105.26 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5179.82 Mb (on task= 0), Smallest = 5068.96 Mb (on task= 162), Average = 5105.26 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 458), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-006.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.1918 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 65809744 (tot= 65809744) masstab= 0 READIC: Type 1: 67888613 (tot= 67888613) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 130479 (tot= 130479) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.92004 sec, total size 6377.24 MB, corresponds to effective I/O rate of 1296.18 MB/sec READIC: Total number of particles : 133828836 INIT: Testing ID uniqueness... INIT: success. took=0.061032 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=30213, determination of top-level tree involved 5 iterations and took 0.489248 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=168 for nextra=117, reaching maximum imbalance of 1.10684|1.10688 DOMAIN: combining multiple-domains took 0.0161762 sec DOMAIN: exchange of 68019092 particles DOMAIN: particle exchange done. (took 0.312626 sec) DOMAIN: domain decomposition done. (took in total 0.825656 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.047522 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=116.161 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.107624 sec =66388.3 NTopnodes=34529 NTopleaves=30213 FOF: Start linking particles (presently allocated=128.839 MB) FOF: linking of small cells took 0.00111418 sec FOF: local links done (took 0.109091 sec, avg-work=0.096443, imbalance=1.1166). FOF: Marked=167689 out of the 67888613 primaries which are linked FOF: begin linking across processors (presently allocated=130.137 MB) FOF: have done 10273 cross links (processed 167689, took 0.00450957 sec) FOF: have done 2672 cross links (processed 83831, took 0.00374783 sec) FOF: have done 472 cross links (processed 12625, took 0.00335365 sec) FOF: have done 78 cross links (processed 2551, took 0.0030651 sec) FOF: have done 11 cross links (processed 375, took 0.00313578 sec) FOF: have done 2 cross links (processed 59, took 0.00308102 sec) FOF: have done 2 cross links (processed 33, took 0.00314218 sec) FOF: have done 0 cross links (processed 11, took 0.00304881 sec) FOF: Local groups found. FOF: primary group finding took = 0.143692 sec FOF: Start finding nearest dm-particle (presently allocated=128.839 MB) FOF: fof-nearest iteration 1: need to repeat for 63772589 particles. (took = 0.0706431 sec) FOF: fof-nearest iteration 2: need to repeat for 53496250 particles. (took = 0.080127 sec) FOF: fof-nearest iteration 3: need to repeat for 29229430 particles. (took = 0.0860377 sec) FOF: fof-nearest iteration 4: need to repeat for 8730179 particles. (took = 0.0591722 sec) FOF: fof-nearest iteration 5: need to repeat for 1163687 particles. (took = 0.0226081 sec) FOF: fof-nearest iteration 6: need to repeat for 26407 particles. (took = 0.00582283 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.330172 sec FOF: compiling local group data and catalogue took = 0.0169416 sec FOF: Total number of FOF groups with at least 32 particles: 750446 FOF: Largest FOF group has 356 particles. FOF: Total number of particles in FOF groups: 133828836 FOF: group properties are now allocated.. (presently allocated=119.934 MB) FOF: computation of group properties took = 0.00613661 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.151926 sec FOF: Finished computing FoF groups. Complete work took 0.83678 sec (presently allocated=116.594 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.472 MB) GRAVTREE: Tree construction done. took 0.34775 sec =86297.3 NTopnodes=34529 NTopleaves=30213 tree-build-scalability=0.600501 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133816031 particles. (took 0.664983 sec) SUBFIND: ngb iteration 2: need to repeat for 133808444 particles. (took 0.545907 sec) SUBFIND: ngb iteration 3: need to repeat for 133802740 particles. (took 0.493941 sec) SUBFIND: ngb iteration 4: need to repeat for 133797888 particles. (took 0.463981 sec) SUBFIND: ngb iteration 5: need to repeat for 133794111 particles. (took 0.451819 sec) SUBFIND: ngb iteration 6: need to repeat for 133790640 particles. (took 0.452521 sec) SUBFIND: ngb iteration 7: need to repeat for 133786904 particles. (took 0.46219 sec) SUBFIND: ngb iteration 8: need to repeat for 133783879 particles. (took 0.478823 sec) SUBFIND: ngb iteration 9: need to repeat for 133781204 particles. (took 0.504011 sec) SUBFIND: ngb iteration 10: need to repeat for 133757789 particles. (took 0.531073 sec) SUBFIND: ngb iteration 11: need to repeat for 133028436 particles. (took 0.559449 sec) SUBFIND: ngb iteration 12: need to repeat for 127821255 particles. (took 0.585309 sec) SUBFIND: ngb iteration 13: need to repeat for 118223435 particles. (took 0.588137 sec) SUBFIND: ngb iteration 14: need to repeat for 105943071 particles. (took 0.565642 sec) SUBFIND: ngb iteration 15: need to repeat for 93539963 particles. (took 0.527246 sec) SUBFIND: ngb iteration 16: need to repeat for 82107866 particles. (took 0.486421 sec) SUBFIND: ngb iteration 17: need to repeat for 70979969 particles. (took 0.443501 sec) SUBFIND: ngb iteration 18: need to repeat for 59166223 particles. (took 0.395362 sec) SUBFIND: ngb iteration 19: need to repeat for 45917639 particles. (took 0.347532 sec) SUBFIND: ngb iteration 20: need to repeat for 31771664 particles. (took 0.29363 sec) SUBFIND: ngb iteration 21: need to repeat for 18868853 particles. (took 0.221922 sec) SUBFIND: ngb iteration 22: need to repeat for 9122533 particles. (took 0.14764 sec) SUBFIND: ngb iteration 23: need to repeat for 3458083 particles. (took 0.0844419 sec) SUBFIND: ngb iteration 24: need to repeat for 960348 particles. (took 0.0402779 sec) SUBFIND: ngb iteration 25: need to repeat for 190095 particles. (took 0.01479 sec) SUBFIND: ngb iteration 26: need to repeat for 36941 particles. (took 0.00381646 sec) SUBFIND: ngb iteration 27: need to repeat for 18277 particles. (took 0.00122418 sec) SUBFIND: ngb iteration 28: need to repeat for 16509 particles. (took 0.00106758 sec) SUBFIND: ngb iteration 29: need to repeat for 15840 particles. (took 0.00150173 sec) SUBFIND: ngb iteration 30: need to repeat for 14995 particles. (took 0.00169896 sec) SUBFIND: ngb iteration 31: need to repeat for 14108 particles. (took 0.00190399 sec) SUBFIND: ngb iteration 32: need to repeat for 12923 particles. (took 0.00191763 sec) SUBFIND: ngb iteration 33: need to repeat for 11373 particles. (took 0.00193156 sec) SUBFIND: ngb iteration 34: need to repeat for 9679 particles. (took 0.00177262 sec) SUBFIND: ngb iteration 35: need to repeat for 7828 particles. (took 0.00207186 sec) SUBFIND: ngb iteration 36: need to repeat for 6058 particles. (took 0.00171961 sec) SUBFIND: ngb iteration 37: need to repeat for 4253 particles. (took 0.00136572 sec) SUBFIND: ngb iteration 38: need to repeat for 2555 particles. (took 0.00104839 sec) SUBFIND: ngb iteration 39: need to repeat for 1455 particles. (took 0.00101419 sec) SUBFIND: ngb iteration 40: need to repeat for 856 particles. (took 0.000936585 sec) SUBFIND: ngb iteration 41: need to repeat for 530 particles. (took 0.000796066 sec) SUBFIND: ngb iteration 42: need to repeat for 267 particles. (took 0.000615721 sec) SUBFIND: ngb iteration 43: need to repeat for 71 particles. (took 0.000469101 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 10.3826 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828836 particles, for threshold size factor 0.6) SUBFIND: The other 750446 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00252405 sec SUBFIND: particle balance=1.1068 SUBFIND: subfind_exchange() took 0.374659 sec SUBFIND: particle balance for processing=1.00163 SUBFIND: subdomain decomposition took 0.0693226 sec SUBFIND: serial subfind subdomain decomposition took 0.0684303 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1159 took 18.0486 sec SUBFIND: root-task=0: Serial processing of halo 0 took 18.2176 SUBFIND: Processing overall took (total time=18.3503 sec) SUBFIND: 0 out of 21368 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344213 ALLOCATE: Changing to MaxPartSph = 169265 SUBFIND: subfind_exchange() (for return to original CPU) took 0.408812 sec TREE: Full tree construction for all particles. (presently allocated=108.06 MB) GRAVTREE: Tree construction done. took 1.02314 sec =86297.3 NTopnodes=34529 NTopleaves=30213 tree-build-scalability=0.600501 SUBFIND: SO iteration 1: need to repeat for 750446 halo centers. (took 0.0171559 sec) SUBFIND: SO iteration 2: need to repeat for 750446 halo centers. (took 0.0153421 sec) SUBFIND: SO iteration 3: need to repeat for 750446 halo centers. (took 0.0151797 sec) SUBFIND: SO iteration 4: need to repeat for 750446 halo centers. (took 0.0149112 sec) SUBFIND: SO iteration 5: need to repeat for 750446 halo centers. (took 0.0147733 sec) SUBFIND: SO iteration 6: need to repeat for 750446 halo centers. (took 0.0147265 sec) SUBFIND: SO iteration 7: need to repeat for 750446 halo centers. (took 0.014777 sec) SUBFIND: SO iteration 8: need to repeat for 750446 halo centers. (took 0.0147599 sec) SUBFIND: SO iteration 9: need to repeat for 750446 halo centers. (took 0.0147709 sec) SUBFIND: SO iteration 10: need to repeat for 750446 halo centers. (took 0.0146764 sec) SUBFIND: SO iteration 11: need to repeat for 750446 halo centers. (took 0.0147212 sec) SUBFIND: SO iteration 12: need to repeat for 750446 halo centers. (took 0.0147851 sec) SUBFIND: SO iteration 13: need to repeat for 750446 halo centers. (took 0.0147159 sec) SUBFIND: SO iteration 14: need to repeat for 750446 halo centers. (took 0.0147527 sec) SUBFIND: SO iteration 15: need to repeat for 750446 halo centers. (took 0.014756 sec) SUBFIND: SO iteration 16: need to repeat for 13438 halo centers. (took 0.014497 sec) SUBFIND: SO iteration 17: need to repeat for 90 halo centers. (took 0.00137829 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000191102 sec) SUBFIND: SO iteration 1: need to repeat for 750446 halo centers. (took 0.0147333 sec) SUBFIND: SO iteration 2: need to repeat for 750446 halo centers. (took 0.0143879 sec) SUBFIND: SO iteration 3: need to repeat for 750446 halo centers. (took 0.014634 sec) SUBFIND: SO iteration 4: need to repeat for 750446 halo centers. (took 0.014663 sec) SUBFIND: SO iteration 5: need to repeat for 750446 halo centers. (took 0.0146143 sec) SUBFIND: SO iteration 6: need to repeat for 750446 halo centers. (took 0.0147083 sec) SUBFIND: SO iteration 7: need to repeat for 750446 halo centers. (took 0.0146712 sec) SUBFIND: SO iteration 8: need to repeat for 750446 halo centers. (took 0.0146682 sec) SUBFIND: SO iteration 9: need to repeat for 750446 halo centers. (took 0.0146622 sec) SUBFIND: SO iteration 10: need to repeat for 750446 halo centers. (took 0.0146112 sec) SUBFIND: SO iteration 11: need to repeat for 750446 halo centers. (took 0.0146484 sec) SUBFIND: SO iteration 12: need to repeat for 750446 halo centers. (took 0.0146325 sec) SUBFIND: SO iteration 13: need to repeat for 750446 halo centers. (took 0.0146867 sec) SUBFIND: SO iteration 14: need to repeat for 750446 halo centers. (took 0.0146868 sec) SUBFIND: SO iteration 15: need to repeat for 750446 halo centers. (took 0.0147036 sec) SUBFIND: SO iteration 16: need to repeat for 6638 halo centers. (took 0.0144393 sec) SUBFIND: SO iteration 17: need to repeat for 35 halo centers. (took 0.000797593 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000173691 sec) SUBFIND: SO iteration 1: need to repeat for 750446 halo centers. (took 0.0147648 sec) SUBFIND: SO iteration 2: need to repeat for 750446 halo centers. (took 0.0150443 sec) SUBFIND: SO iteration 3: need to repeat for 750446 halo centers. (took 0.015031 sec) SUBFIND: SO iteration 4: need to repeat for 750446 halo centers. (took 0.0147899 sec) SUBFIND: SO iteration 5: need to repeat for 750446 halo centers. (took 0.0146909 sec) SUBFIND: SO iteration 6: need to repeat for 750446 halo centers. (took 0.0146893 sec) SUBFIND: SO iteration 7: need to repeat for 750446 halo centers. (took 0.0146703 sec) SUBFIND: SO iteration 8: need to repeat for 750446 halo centers. (took 0.0146976 sec) SUBFIND: SO iteration 9: need to repeat for 750446 halo centers. (took 0.0146696 sec) SUBFIND: SO iteration 10: need to repeat for 750446 halo centers. (took 0.0147375 sec) SUBFIND: SO iteration 11: need to repeat for 750446 halo centers. (took 0.014699 sec) SUBFIND: SO iteration 12: need to repeat for 750446 halo centers. (took 0.0146814 sec) SUBFIND: SO iteration 13: need to repeat for 750446 halo centers. (took 0.0147225 sec) SUBFIND: SO iteration 14: need to repeat for 750446 halo centers. (took 0.0146884 sec) SUBFIND: SO iteration 15: need to repeat for 750446 halo centers. (took 0.014695 sec) SUBFIND: SO iteration 16: need to repeat for 13726 halo centers. (took 0.0144771 sec) SUBFIND: SO iteration 17: need to repeat for 91 halo centers. (took 0.00138206 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.0001813 sec) SUBFIND: SO iteration 1: need to repeat for 750446 halo centers. (took 0.0147106 sec) SUBFIND: SO iteration 2: need to repeat for 750446 halo centers. (took 0.015224 sec) SUBFIND: SO iteration 3: need to repeat for 750446 halo centers. (took 0.0147816 sec) SUBFIND: SO iteration 4: need to repeat for 750446 halo centers. (took 0.015092 sec) SUBFIND: SO iteration 5: need to repeat for 750446 halo centers. (took 0.0150837 sec) SUBFIND: SO iteration 6: need to repeat for 750446 halo centers. (took 0.0150898 sec) SUBFIND: SO iteration 7: need to repeat for 750446 halo centers. (took 0.0150146 sec) SUBFIND: SO iteration 8: need to repeat for 750446 halo centers. (took 0.0153462 sec) SUBFIND: SO iteration 9: need to repeat for 750446 halo centers. (took 0.0152006 sec) SUBFIND: SO iteration 10: need to repeat for 750446 halo centers. (took 0.0152765 sec) SUBFIND: SO iteration 11: need to repeat for 750446 halo centers. (took 0.0152446 sec) SUBFIND: SO iteration 12: need to repeat for 750446 halo centers. (took 0.0150744 sec) SUBFIND: SO iteration 13: need to repeat for 750446 halo centers. (took 0.0151123 sec) SUBFIND: SO iteration 14: need to repeat for 750446 halo centers. (took 0.0150868 sec) SUBFIND: SO iteration 15: need to repeat for 750446 halo centers. (took 0.0150751 sec) SUBFIND: SO iteration 16: need to repeat for 420076 halo centers. (took 0.0149942 sec) SUBFIND: SO iteration 17: need to repeat for 13802 halo centers. (took 0.0112014 sec) SUBFIND: SO iteration 18: need to repeat for 272 halo centers. (took 0.00137323 sec) SUBFIND: determining spherical overdensity masses took 0.970224 sec SUBFIND: assembled and ordered groups and subhalos (took 0.160917 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.12495 sec, total size 284.942 MB, corresponds to effective I/O rate of 134.094 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.12593 sec SUBFIND: Finished with SUBFIND. (total time=34.2185 sec) SUBFIND: Total number of subhalos with at least 20 particles: 771783 SUBFIND: Largest subhalo has 230 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133828836 FOF: preparing output order of particles took 1.26008 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.33828 sec, total size 5347.78 MB, corresponds to effective I/O rate of 641.353 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 60 (rank 60 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 77 (rank 77 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 66 (rank 66 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.