TACC: Starting up job 4245022 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186314.06 Mb (on task= 162), Smallest = 186207.83 Mb (on task= 351), Average = 186280.46 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5179.06 Mb (on task= 351), Smallest = 5072.83 Mb (on task= 162), Average = 5106.43 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5179.06 Mb (on task= 351), Smallest = 5072.83 Mb (on task= 162), Average = 5106.43 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 367), Average = 95257.25 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-019.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.9587 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 65809482 (tot= 65809482) masstab= 0 READIC: Type 1: 67881853 (tot= 67881853) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 137728 (tot= 137728) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.94186 sec, total size 6377.25 MB, corresponds to effective I/O rate of 1290.46 MB/sec READIC: Total number of particles : 133829063 INIT: Testing ID uniqueness... INIT: success. took=0.0620532 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=30185, determination of top-level tree involved 6 iterations and took 0.49387 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=168 for nextra=117, reaching maximum imbalance of 1.10636|1.10688 DOMAIN: combining multiple-domains took 0.0149739 sec DOMAIN: exchange of 68019581 particles DOMAIN: particle exchange done. (took 0.307266 sec) DOMAIN: domain decomposition done. (took in total 0.823762 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0472661 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=116.159 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.107247 sec =66126.9 NTopnodes=34497 NTopleaves=30185 FOF: Start linking particles (presently allocated=128.768 MB) FOF: linking of small cells took 0.00118779 sec FOF: local links done (took 0.108971 sec, avg-work=0.0968344, imbalance=1.11336). FOF: Marked=170400 out of the 67881853 primaries which are linked FOF: begin linking across processors (presently allocated=130.062 MB) FOF: have done 10261 cross links (processed 170400, took 0.00456575 sec) FOF: have done 2599 cross links (processed 84806, took 0.00373145 sec) FOF: have done 478 cross links (processed 13009, took 0.00329884 sec) FOF: have done 96 cross links (processed 2348, took 0.00310157 sec) FOF: have done 22 cross links (processed 405, took 0.00308107 sec) FOF: have done 5 cross links (processed 73, took 0.00307076 sec) FOF: have done 1 cross links (processed 12, took 0.00302628 sec) FOF: have done 0 cross links (processed 2, took 0.0029901 sec) FOF: Local groups found. FOF: primary group finding took = 0.143451 sec FOF: Start finding nearest dm-particle (presently allocated=128.768 MB) FOF: fof-nearest iteration 1: need to repeat for 63764443 particles. (took = 0.0698277 sec) FOF: fof-nearest iteration 2: need to repeat for 53442947 particles. (took = 0.0798182 sec) FOF: fof-nearest iteration 3: need to repeat for 29115322 particles. (took = 0.0861792 sec) FOF: fof-nearest iteration 4: need to repeat for 8649366 particles. (took = 0.0586374 sec) FOF: fof-nearest iteration 5: need to repeat for 1147907 particles. (took = 0.0224941 sec) FOF: fof-nearest iteration 6: need to repeat for 25883 particles. (took = 0.00559381 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.328254 sec FOF: compiling local group data and catalogue took = 0.016983 sec FOF: Total number of FOF groups with at least 32 particles: 732806 FOF: Largest FOF group has 185 particles. FOF: Total number of particles in FOF groups: 133829063 FOF: group properties are now allocated.. (presently allocated=119.908 MB) FOF: computation of group properties took = 0.00612581 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.147428 sec FOF: Finished computing FoF groups. Complete work took 0.830243 sec (presently allocated=116.58 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.416 MB) GRAVTREE: Tree construction done. took 0.352918 sec =86006.5 NTopnodes=34497 NTopleaves=30185 tree-build-scalability=0.599521 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133821867 particles. (took 0.657998 sec) SUBFIND: ngb iteration 2: need to repeat for 133817763 particles. (took 0.552452 sec) SUBFIND: ngb iteration 3: need to repeat for 133814676 particles. (took 0.497454 sec) SUBFIND: ngb iteration 4: need to repeat for 133811825 particles. (took 0.468995 sec) SUBFIND: ngb iteration 5: need to repeat for 133808441 particles. (took 0.458596 sec) SUBFIND: ngb iteration 6: need to repeat for 133806380 particles. (took 0.458421 sec) SUBFIND: ngb iteration 7: need to repeat for 133804467 particles. (took 0.467599 sec) SUBFIND: ngb iteration 8: need to repeat for 133802794 particles. (took 0.48549 sec) SUBFIND: ngb iteration 9: need to repeat for 133801056 particles. (took 0.510881 sec) SUBFIND: ngb iteration 10: need to repeat for 133772103 particles. (took 0.538385 sec) SUBFIND: ngb iteration 11: need to repeat for 132906191 particles. (took 0.569069 sec) SUBFIND: ngb iteration 12: need to repeat for 127390960 particles. (took 0.596811 sec) SUBFIND: ngb iteration 13: need to repeat for 117813971 particles. (took 0.597065 sec) SUBFIND: ngb iteration 14: need to repeat for 105646294 particles. (took 0.577648 sec) SUBFIND: ngb iteration 15: need to repeat for 93442497 particles. (took 0.538724 sec) SUBFIND: ngb iteration 16: need to repeat for 82268373 particles. (took 0.496608 sec) SUBFIND: ngb iteration 17: need to repeat for 71443656 particles. (took 0.455768 sec) SUBFIND: ngb iteration 18: need to repeat for 59998913 particles. (took 0.409562 sec) SUBFIND: ngb iteration 19: need to repeat for 47153201 particles. (took 0.354571 sec) SUBFIND: ngb iteration 20: need to repeat for 33227325 particles. (took 0.301162 sec) SUBFIND: ngb iteration 21: need to repeat for 20198235 particles. (took 0.236903 sec) SUBFIND: ngb iteration 22: need to repeat for 10059651 particles. (took 0.16491 sec) SUBFIND: ngb iteration 23: need to repeat for 3936436 particles. (took 0.0984534 sec) SUBFIND: ngb iteration 24: need to repeat for 1133253 particles. (took 0.0482421 sec) SUBFIND: ngb iteration 25: need to repeat for 227107 particles. (took 0.0190099 sec) SUBFIND: ngb iteration 26: need to repeat for 37136 particles. (took 0.00542323 sec) SUBFIND: ngb iteration 27: need to repeat for 12719 particles. (took 0.00115082 sec) SUBFIND: ngb iteration 28: need to repeat for 10689 particles. (took 0.00116332 sec) SUBFIND: ngb iteration 29: need to repeat for 10127 particles. (took 0.00162109 sec) SUBFIND: ngb iteration 30: need to repeat for 9609 particles. (took 0.0013411 sec) SUBFIND: ngb iteration 31: need to repeat for 8840 particles. (took 0.0014313 sec) SUBFIND: ngb iteration 32: need to repeat for 7671 particles. (took 0.00162515 sec) SUBFIND: ngb iteration 33: need to repeat for 6711 particles. (took 0.00125884 sec) SUBFIND: ngb iteration 34: need to repeat for 5743 particles. (took 0.00121185 sec) SUBFIND: ngb iteration 35: need to repeat for 4683 particles. (took 0.00105007 sec) SUBFIND: ngb iteration 36: need to repeat for 3702 particles. (took 0.00103217 sec) SUBFIND: ngb iteration 37: need to repeat for 2749 particles. (took 0.000874544 sec) SUBFIND: ngb iteration 38: need to repeat for 1602 particles. (took 0.000769776 sec) SUBFIND: ngb iteration 39: need to repeat for 810 particles. (took 0.000711508 sec) SUBFIND: ngb iteration 40: need to repeat for 406 particles. (took 0.000619579 sec) SUBFIND: ngb iteration 41: need to repeat for 172 particles. (took 0.000577114 sec) SUBFIND: ngb iteration 42: need to repeat for 101 particles. (took 0.000489757 sec) SUBFIND: ngb iteration 43: need to repeat for 12 particles. (took 0.000356864 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 10.5886 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133829063 particles, for threshold size factor 0.6) SUBFIND: The other 732806 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00245884 sec SUBFIND: particle balance=1.10607 SUBFIND: subfind_exchange() took 0.379392 sec SUBFIND: particle balance for processing=1.00012 SUBFIND: subdomain decomposition took 0.0694153 sec SUBFIND: serial subfind subdomain decomposition took 0.0686337 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=1131 took 17.6325 sec SUBFIND: root-task=0: Serial processing of halo 0 took 17.8017 SUBFIND: Processing overall took (total time=18.0729 sec) SUBFIND: 0 out of 23612 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344211 ALLOCATE: Changing to MaxPartSph = 169263 SUBFIND: subfind_exchange() (for return to original CPU) took 0.413521 sec TREE: Full tree construction for all particles. (presently allocated=107.964 MB) GRAVTREE: Tree construction done. took 1.04637 sec =86006.5 NTopnodes=34497 NTopleaves=30185 tree-build-scalability=0.599521 SUBFIND: SO iteration 1: need to repeat for 732806 halo centers. (took 0.0166746 sec) SUBFIND: SO iteration 2: need to repeat for 732806 halo centers. (took 0.0154198 sec) SUBFIND: SO iteration 3: need to repeat for 732806 halo centers. (took 0.0150694 sec) SUBFIND: SO iteration 4: need to repeat for 732806 halo centers. (took 0.0147984 sec) SUBFIND: SO iteration 5: need to repeat for 732806 halo centers. (took 0.0147147 sec) SUBFIND: SO iteration 6: need to repeat for 732806 halo centers. (took 0.0146821 sec) SUBFIND: SO iteration 7: need to repeat for 732806 halo centers. (took 0.0146403 sec) SUBFIND: SO iteration 8: need to repeat for 732806 halo centers. (took 0.0146833 sec) SUBFIND: SO iteration 9: need to repeat for 732806 halo centers. (took 0.0146823 sec) SUBFIND: SO iteration 10: need to repeat for 732806 halo centers. (took 0.0146271 sec) SUBFIND: SO iteration 11: need to repeat for 732806 halo centers. (took 0.0146861 sec) SUBFIND: SO iteration 12: need to repeat for 732806 halo centers. (took 0.0146932 sec) SUBFIND: SO iteration 13: need to repeat for 732806 halo centers. (took 0.0146602 sec) SUBFIND: SO iteration 14: need to repeat for 732806 halo centers. (took 0.0146151 sec) SUBFIND: SO iteration 15: need to repeat for 732806 halo centers. (took 0.014657 sec) SUBFIND: SO iteration 16: need to repeat for 12908 halo centers. (took 0.0144421 sec) SUBFIND: SO iteration 17: need to repeat for 90 halo centers. (took 0.00130147 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000183776 sec) SUBFIND: SO iteration 1: need to repeat for 732806 halo centers. (took 0.014598 sec) SUBFIND: SO iteration 2: need to repeat for 732806 halo centers. (took 0.0143651 sec) SUBFIND: SO iteration 3: need to repeat for 732806 halo centers. (took 0.0145071 sec) SUBFIND: SO iteration 4: need to repeat for 732806 halo centers. (took 0.0146247 sec) SUBFIND: SO iteration 5: need to repeat for 732806 halo centers. (took 0.0145498 sec) SUBFIND: SO iteration 6: need to repeat for 732806 halo centers. (took 0.0145873 sec) SUBFIND: SO iteration 7: need to repeat for 732806 halo centers. (took 0.0145421 sec) SUBFIND: SO iteration 8: need to repeat for 732806 halo centers. (took 0.0145465 sec) SUBFIND: SO iteration 9: need to repeat for 732806 halo centers. (took 0.014588 sec) SUBFIND: SO iteration 10: need to repeat for 732806 halo centers. (took 0.0145576 sec) SUBFIND: SO iteration 11: need to repeat for 732806 halo centers. (took 0.0145995 sec) SUBFIND: SO iteration 12: need to repeat for 732806 halo centers. (took 0.0145442 sec) SUBFIND: SO iteration 13: need to repeat for 732806 halo centers. (took 0.0145661 sec) SUBFIND: SO iteration 14: need to repeat for 732806 halo centers. (took 0.0145436 sec) SUBFIND: SO iteration 15: need to repeat for 732806 halo centers. (took 0.0146262 sec) SUBFIND: SO iteration 16: need to repeat for 6296 halo centers. (took 0.0143401 sec) SUBFIND: SO iteration 17: need to repeat for 33 halo centers. (took 0.00093089 sec) SUBFIND: SO iteration 1: need to repeat for 732806 halo centers. (took 0.0147819 sec) SUBFIND: SO iteration 2: need to repeat for 732806 halo centers. (took 0.0150179 sec) SUBFIND: SO iteration 3: need to repeat for 732806 halo centers. (took 0.0149859 sec) SUBFIND: SO iteration 4: need to repeat for 732806 halo centers. (took 0.014716 sec) SUBFIND: SO iteration 5: need to repeat for 732806 halo centers. (took 0.0146333 sec) SUBFIND: SO iteration 6: need to repeat for 732806 halo centers. (took 0.0146232 sec) SUBFIND: SO iteration 7: need to repeat for 732806 halo centers. (took 0.0148256 sec) SUBFIND: SO iteration 8: need to repeat for 732806 halo centers. (took 0.0146131 sec) SUBFIND: SO iteration 9: need to repeat for 732806 halo centers. (took 0.0145748 sec) SUBFIND: SO iteration 10: need to repeat for 732806 halo centers. (took 0.0146256 sec) SUBFIND: SO iteration 11: need to repeat for 732806 halo centers. (took 0.014614 sec) SUBFIND: SO iteration 12: need to repeat for 732806 halo centers. (took 0.0146023 sec) SUBFIND: SO iteration 13: need to repeat for 732806 halo centers. (took 0.0146364 sec) SUBFIND: SO iteration 14: need to repeat for 732806 halo centers. (took 0.0147311 sec) SUBFIND: SO iteration 15: need to repeat for 732806 halo centers. (took 0.0146385 sec) SUBFIND: SO iteration 16: need to repeat for 13185 halo centers. (took 0.014448 sec) SUBFIND: SO iteration 17: need to repeat for 90 halo centers. (took 0.00136009 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000180901 sec) SUBFIND: SO iteration 1: need to repeat for 732806 halo centers. (took 0.0145987 sec) SUBFIND: SO iteration 2: need to repeat for 732806 halo centers. (took 0.0151647 sec) SUBFIND: SO iteration 3: need to repeat for 732806 halo centers. (took 0.0147468 sec) SUBFIND: SO iteration 4: need to repeat for 732806 halo centers. (took 0.0150252 sec) SUBFIND: SO iteration 5: need to repeat for 732806 halo centers. (took 0.0149373 sec) SUBFIND: SO iteration 6: need to repeat for 732806 halo centers. (took 0.0149809 sec) SUBFIND: SO iteration 7: need to repeat for 732806 halo centers. (took 0.0152962 sec) SUBFIND: SO iteration 8: need to repeat for 732806 halo centers. (took 0.0151332 sec) SUBFIND: SO iteration 9: need to repeat for 732806 halo centers. (took 0.0152969 sec) SUBFIND: SO iteration 10: need to repeat for 732806 halo centers. (took 0.0153295 sec) SUBFIND: SO iteration 11: need to repeat for 732806 halo centers. (took 0.015516 sec) SUBFIND: SO iteration 12: need to repeat for 732806 halo centers. (took 0.0151484 sec) SUBFIND: SO iteration 13: need to repeat for 732806 halo centers. (took 0.0156367 sec) SUBFIND: SO iteration 14: need to repeat for 732806 halo centers. (took 0.015262 sec) SUBFIND: SO iteration 15: need to repeat for 732806 halo centers. (took 0.0151779 sec) SUBFIND: SO iteration 16: need to repeat for 408999 halo centers. (took 0.0152768 sec) SUBFIND: SO iteration 17: need to repeat for 12924 halo centers. (took 0.0111168 sec) SUBFIND: SO iteration 18: need to repeat for 245 halo centers. (took 0.00126469 sec) SUBFIND: SO iteration 19: need to repeat for 1 halo centers. (took 0.000187011 sec) SUBFIND: determining spherical overdensity masses took 0.967625 sec SUBFIND: assembled and ordered groups and subhalos (took 0.158694 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.11873 sec, total size 278.807 MB, corresponds to effective I/O rate of 131.592 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.11966 sec SUBFIND: Finished with SUBFIND. (total time=34.1679 sec) SUBFIND: Total number of subhalos with at least 20 particles: 756373 SUBFIND: Largest subhalo has 185 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133829063 FOF: preparing output order of particles took 1.24501 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.30901 sec, total size 5347.79 MB, corresponds to effective I/O rate of 643.613 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 349 (rank 349 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 395 (rank 395 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 339 (rank 339 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 347 (rank 347 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 358 (rank 358 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 359 (rank 359 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.