TACC: Starting up job 4245022 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 24 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 648 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186313.15 Mb (on task= 513), Smallest = 186196.79 Mb (on task= 0), Average = 186281.32 Mb Total Mem: Largest = 191386.89 Mb (on task= 27), Smallest = 191386.89 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5190.10 Mb (on task= 0), Smallest = 5073.74 Mb (on task= 513), Average = 5105.57 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5190.10 Mb (on task= 0), Smallest = 5073.74 Mb (on task= 513), Average = 5105.57 Mb avail /dev/shm: Largest = 95257.27 Mb (on task= 81), Smallest = 95257.20 Mb (on task= 404), Average = 95257.24 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-006.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.2868 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 65689646 (tot= 65689646) masstab= 0 READIC: Type 1: 67911096 (tot= 67911096) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 228213 (tot= 228213) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 647. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 5.05581 sec, total size 6376.79 MB, corresponds to effective I/O rate of 1261.28 MB/sec READIC: Total number of particles : 133828955 INIT: Testing ID uniqueness... INIT: success. took=0.0621053 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: Increasing TopNodeAllocFactor=5.32333 new value=6.92033 DOMAIN: NTopleaves=30192, determination of top-level tree involved 6 iterations and took 0.497301 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=648, nnodes=24 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=168 for nextra=117, reaching maximum imbalance of 1.10665|1.10688 DOMAIN: combining multiple-domains took 0.0147065 sec DOMAIN: exchange of 68139309 particles DOMAIN: particle exchange done. (took 0.303213 sec) DOMAIN: domain decomposition done. (took in total 0.822732 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.047295 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=116.1 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.108498 sec =64075.7 NTopnodes=34505 NTopleaves=30192 FOF: Start linking particles (presently allocated=128.393 MB) FOF: linking of small cells took 0.00108772 sec FOF: local links done (took 0.113068 sec, avg-work=0.101373, imbalance=1.10681). FOF: Marked=165916 out of the 67911096 primaries which are linked FOF: begin linking across processors (presently allocated=129.669 MB) FOF: have done 9515 cross links (processed 165916, took 0.00459776 sec) FOF: have done 2691 cross links (processed 85238, took 0.00369541 sec) FOF: have done 505 cross links (processed 13169, took 0.00335973 sec) FOF: have done 103 cross links (processed 2493, took 0.00309827 sec) FOF: have done 13 cross links (processed 422, took 0.00300529 sec) FOF: have done 1 cross links (processed 46, took 0.00303967 sec) FOF: have done 0 cross links (processed 4, took 0.00297303 sec) FOF: Local groups found. FOF: primary group finding took = 0.144184 sec FOF: Start finding nearest dm-particle (presently allocated=128.393 MB) FOF: fof-nearest iteration 1: need to repeat for 63595072 particles. (took = 0.0719128 sec) FOF: fof-nearest iteration 2: need to repeat for 52777965 particles. (took = 0.082842 sec) FOF: fof-nearest iteration 3: need to repeat for 28018633 particles. (took = 0.0897563 sec) FOF: fof-nearest iteration 4: need to repeat for 7962490 particles. (took = 0.0602767 sec) FOF: fof-nearest iteration 5: need to repeat for 1017687 particles. (took = 0.0221115 sec) FOF: fof-nearest iteration 6: need to repeat for 22558 particles. (took = 0.00546613 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.338087 sec FOF: compiling local group data and catalogue took = 0.0168335 sec FOF: Total number of FOF groups with at least 32 particles: 573973 FOF: Largest FOF group has 236 particles. FOF: Total number of particles in FOF groups: 133828955 FOF: group properties are now allocated.. (presently allocated=119.727 MB) FOF: computation of group properties took = 0.0057551 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.147295 sec FOF: Finished computing FoF groups. Complete work took 0.838807 sec (presently allocated=116.428 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=120.017 MB) GRAVTREE: Tree construction done. took 0.346798 sec =83512.9 NTopnodes=34505 NTopleaves=30192 tree-build-scalability=0.587468 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133828795 particles. (took 0.743196 sec) SUBFIND: ngb iteration 2: need to repeat for 133828685 particles. (took 0.633107 sec) SUBFIND: ngb iteration 3: need to repeat for 133828685 particles. (took 0.583232 sec) SUBFIND: ngb iteration 4: need to repeat for 133828678 particles. (took 0.554371 sec) SUBFIND: ngb iteration 5: need to repeat for 133828673 particles. (took 0.546126 sec) SUBFIND: ngb iteration 6: need to repeat for 133828579 particles. (took 0.549983 sec) SUBFIND: ngb iteration 7: need to repeat for 133828482 particles. (took 0.563714 sec) SUBFIND: ngb iteration 8: need to repeat for 133828274 particles. (took 0.585848 sec) SUBFIND: ngb iteration 9: need to repeat for 133824331 particles. (took 0.613921 sec) SUBFIND: ngb iteration 10: need to repeat for 133602897 particles. (took 0.647935 sec) SUBFIND: ngb iteration 11: need to repeat for 130801613 particles. (took 0.686897 sec) SUBFIND: ngb iteration 12: need to repeat for 124008412 particles. (took 0.709452 sec) SUBFIND: ngb iteration 13: need to repeat for 114270275 particles. (took 0.704566 sec) SUBFIND: ngb iteration 14: need to repeat for 102915100 particles. (took 0.679747 sec) SUBFIND: ngb iteration 15: need to repeat for 92105585 particles. (took 0.635152 sec) SUBFIND: ngb iteration 16: need to repeat for 82440306 particles. (took 0.58843 sec) SUBFIND: ngb iteration 17: need to repeat for 73314989 particles. (took 0.541244 sec) SUBFIND: ngb iteration 18: need to repeat for 64043016 particles. (took 0.493951 sec) SUBFIND: ngb iteration 19: need to repeat for 53940712 particles. (took 0.443836 sec) SUBFIND: ngb iteration 20: need to repeat for 42391553 particles. (took 0.39063 sec) SUBFIND: ngb iteration 21: need to repeat for 29903813 particles. (took 0.324175 sec) SUBFIND: ngb iteration 22: need to repeat for 18122795 particles. (took 0.250004 sec) SUBFIND: ngb iteration 23: need to repeat for 8933850 particles. (took 0.176775 sec) SUBFIND: ngb iteration 24: need to repeat for 3438763 particles. (took 0.106625 sec) SUBFIND: ngb iteration 25: need to repeat for 958812 particles. (took 0.0529355 sec) SUBFIND: ngb iteration 26: need to repeat for 177422 particles. (took 0.0195045 sec) SUBFIND: ngb iteration 27: need to repeat for 20533 particles. (took 0.00484034 sec) SUBFIND: ngb iteration 28: need to repeat for 1721 particles. (took 0.0011994 sec) SUBFIND: ngb iteration 29: need to repeat for 384 particles. (took 0.00101605 sec) SUBFIND: ngb iteration 30: need to repeat for 266 particles. (took 0.00086329 sec) SUBFIND: ngb iteration 31: need to repeat for 218 particles. (took 0.00147581 sec) SUBFIND: ngb iteration 32: need to repeat for 176 particles. (took 0.00123093 sec) SUBFIND: ngb iteration 33: need to repeat for 159 particles. (took 0.00105685 sec) SUBFIND: ngb iteration 34: need to repeat for 124 particles. (took 0.000946144 sec) SUBFIND: ngb iteration 35: need to repeat for 67 particles. (took 0.000653501 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 12.8443 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828955 particles, for threshold size factor 0.6) SUBFIND: The other 573973 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.0022794 sec SUBFIND: particle balance=1.10665 SUBFIND: subfind_exchange() took 0.375195 sec SUBFIND: particle balance for processing=1.00028 SUBFIND: subdomain decomposition took 0.0692826 sec SUBFIND: serial subfind subdomain decomposition took 0.0682054 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=886 took 15.0805 sec SUBFIND: root-task=0: Serial processing of halo 0 took 15.2492 SUBFIND: Processing overall took (total time=15.6082 sec) SUBFIND: 0 out of 57446 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 344213 ALLOCATE: Changing to MaxPartSph = 168955 SUBFIND: subfind_exchange() (for return to original CPU) took 0.410937 sec TREE: Full tree construction for all particles. (presently allocated=107.65 MB) GRAVTREE: Tree construction done. took 0.957256 sec =83512.9 NTopnodes=34505 NTopleaves=30192 tree-build-scalability=0.587468 SUBFIND: SO iteration 1: need to repeat for 573973 halo centers. (took 0.0153551 sec) SUBFIND: SO iteration 2: need to repeat for 573973 halo centers. (took 0.0143725 sec) SUBFIND: SO iteration 3: need to repeat for 573973 halo centers. (took 0.0139753 sec) SUBFIND: SO iteration 4: need to repeat for 573973 halo centers. (took 0.0136954 sec) SUBFIND: SO iteration 5: need to repeat for 573973 halo centers. (took 0.0136247 sec) SUBFIND: SO iteration 6: need to repeat for 573973 halo centers. (took 0.0135941 sec) SUBFIND: SO iteration 7: need to repeat for 573973 halo centers. (took 0.0135572 sec) SUBFIND: SO iteration 8: need to repeat for 573973 halo centers. (took 0.0135778 sec) SUBFIND: SO iteration 9: need to repeat for 573973 halo centers. (took 0.0136921 sec) SUBFIND: SO iteration 10: need to repeat for 573973 halo centers. (took 0.0134468 sec) SUBFIND: SO iteration 11: need to repeat for 573973 halo centers. (took 0.0136802 sec) SUBFIND: SO iteration 12: need to repeat for 573973 halo centers. (took 0.0135252 sec) SUBFIND: SO iteration 13: need to repeat for 573973 halo centers. (took 0.0135206 sec) SUBFIND: SO iteration 14: need to repeat for 573973 halo centers. (took 0.0135913 sec) SUBFIND: SO iteration 15: need to repeat for 573973 halo centers. (took 0.0134842 sec) SUBFIND: SO iteration 16: need to repeat for 7810 halo centers. (took 0.0134082 sec) SUBFIND: SO iteration 17: need to repeat for 31 halo centers. (took 0.000908783 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.00018373 sec) SUBFIND: SO iteration 1: need to repeat for 573973 halo centers. (took 0.0135406 sec) SUBFIND: SO iteration 2: need to repeat for 573973 halo centers. (took 0.0132101 sec) SUBFIND: SO iteration 3: need to repeat for 573973 halo centers. (took 0.0133844 sec) SUBFIND: SO iteration 4: need to repeat for 573973 halo centers. (took 0.0134191 sec) SUBFIND: SO iteration 5: need to repeat for 573973 halo centers. (took 0.0134895 sec) SUBFIND: SO iteration 6: need to repeat for 573973 halo centers. (took 0.0134003 sec) SUBFIND: SO iteration 7: need to repeat for 573973 halo centers. (took 0.0134886 sec) SUBFIND: SO iteration 8: need to repeat for 573973 halo centers. (took 0.0134254 sec) SUBFIND: SO iteration 9: need to repeat for 573973 halo centers. (took 0.0134641 sec) SUBFIND: SO iteration 10: need to repeat for 573973 halo centers. (took 0.013455 sec) SUBFIND: SO iteration 11: need to repeat for 573973 halo centers. (took 0.0134325 sec) SUBFIND: SO iteration 12: need to repeat for 573973 halo centers. (took 0.0135003 sec) SUBFIND: SO iteration 13: need to repeat for 573973 halo centers. (took 0.0134039 sec) SUBFIND: SO iteration 14: need to repeat for 573973 halo centers. (took 0.0134843 sec) SUBFIND: SO iteration 15: need to repeat for 573973 halo centers. (took 0.0134184 sec) SUBFIND: SO iteration 16: need to repeat for 3610 halo centers. (took 0.0133256 sec) SUBFIND: SO iteration 17: need to repeat for 15 halo centers. (took 0.000521557 sec) SUBFIND: SO iteration 1: need to repeat for 573973 halo centers. (took 0.0135095 sec) SUBFIND: SO iteration 2: need to repeat for 573973 halo centers. (took 0.0139459 sec) SUBFIND: SO iteration 3: need to repeat for 573973 halo centers. (took 0.0138674 sec) SUBFIND: SO iteration 4: need to repeat for 573973 halo centers. (took 0.0136049 sec) SUBFIND: SO iteration 5: need to repeat for 573973 halo centers. (took 0.0135401 sec) SUBFIND: SO iteration 6: need to repeat for 573973 halo centers. (took 0.0140287 sec) SUBFIND: SO iteration 7: need to repeat for 573973 halo centers. (took 0.0136426 sec) SUBFIND: SO iteration 8: need to repeat for 573973 halo centers. (took 0.0139199 sec) SUBFIND: SO iteration 9: need to repeat for 573973 halo centers. (took 0.0140662 sec) SUBFIND: SO iteration 10: need to repeat for 573973 halo centers. (took 0.0139071 sec) SUBFIND: SO iteration 11: need to repeat for 573973 halo centers. (took 0.0142646 sec) SUBFIND: SO iteration 12: need to repeat for 573973 halo centers. (took 0.0137429 sec) SUBFIND: SO iteration 13: need to repeat for 573973 halo centers. (took 0.0138978 sec) SUBFIND: SO iteration 14: need to repeat for 573973 halo centers. (took 0.0140543 sec) SUBFIND: SO iteration 15: need to repeat for 573973 halo centers. (took 0.0138825 sec) SUBFIND: SO iteration 16: need to repeat for 7984 halo centers. (took 0.0137469 sec) SUBFIND: SO iteration 17: need to repeat for 31 halo centers. (took 0.000922537 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000204597 sec) SUBFIND: SO iteration 1: need to repeat for 573973 halo centers. (took 0.0144489 sec) SUBFIND: SO iteration 2: need to repeat for 573973 halo centers. (took 0.0143611 sec) SUBFIND: SO iteration 3: need to repeat for 573973 halo centers. (took 0.0138862 sec) SUBFIND: SO iteration 4: need to repeat for 573973 halo centers. (took 0.0141734 sec) SUBFIND: SO iteration 5: need to repeat for 573973 halo centers. (took 0.0141531 sec) SUBFIND: SO iteration 6: need to repeat for 573973 halo centers. (took 0.0140234 sec) SUBFIND: SO iteration 7: need to repeat for 573973 halo centers. (took 0.0140884 sec) SUBFIND: SO iteration 8: need to repeat for 573973 halo centers. (took 0.0139826 sec) SUBFIND: SO iteration 9: need to repeat for 573973 halo centers. (took 0.0140167 sec) SUBFIND: SO iteration 10: need to repeat for 573973 halo centers. (took 0.0139975 sec) SUBFIND: SO iteration 11: need to repeat for 573973 halo centers. (took 0.013944 sec) SUBFIND: SO iteration 12: need to repeat for 573973 halo centers. (took 0.0139658 sec) SUBFIND: SO iteration 13: need to repeat for 573973 halo centers. (took 0.0139514 sec) SUBFIND: SO iteration 14: need to repeat for 573973 halo centers. (took 0.0139743 sec) SUBFIND: SO iteration 15: need to repeat for 573973 halo centers. (took 0.0140065 sec) SUBFIND: SO iteration 16: need to repeat for 313522 halo centers. (took 0.0138909 sec) SUBFIND: SO iteration 17: need to repeat for 7318 halo centers. (took 0.0104032 sec) SUBFIND: SO iteration 18: need to repeat for 112 halo centers. (took 0.000842243 sec) SUBFIND: determining spherical overdensity masses took 0.898189 sec SUBFIND: assembled and ordered groups and subhalos (took 0.157491 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 2.08598 sec, total size 226.391 MB, corresponds to effective I/O rate of 108.53 MB/sec SUBFIND: Subgroup catalogues saved. took = 2.08696 sec SUBFIND: Finished with SUBFIND. (total time=33.7623 sec) SUBFIND: Total number of subhalos with at least 20 particles: 631339 SUBFIND: Largest subhalo has 236 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133828955 FOF: preparing output order of particles took 1.23507 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 9.17993 sec, total size 5346.41 MB, corresponds to effective I/O rate of 582.402 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 435 (rank 435 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 438 (rank 438 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 440 (rank 440 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.