TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186460.00 Mb (on task= 621), Smallest = 186401.76 Mb (on task= 270), Average = 186424.77 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5113.57 Mb (on task= 270), Smallest = 5055.33 Mb (on task= 621), Average = 5090.56 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5113.57 Mb (on task= 270), Smallest = 5055.33 Mb (on task= 621), Average = 5090.56 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 12), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c105-181.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.1471 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 61606524 (tot= 61606524) masstab= 0 READIC: Type 1: 72222103 (tot= 72222103) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 333 (tot= 333) masstab= 0 READIC: Type 5: 1 (tot= 1) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 30.9615 sec, total size 6361.21 MB, corresponds to effective I/O rate of 205.455 MB/sec READIC: Total number of particles : 133828961 INIT: Testing ID uniqueness... INIT: success. took=0.0585494 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=26342, determination of top-level tree involved 6 iterations and took 0.362605 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=188 for nextra=21, reaching maximum imbalance of 1.12214|1.12253 DOMAIN: combining multiple-domains took 0.0150167 sec DOMAIN: exchange of 72222437 particles DOMAIN: particle exchange done. (took 0.199191 sec) DOMAIN: domain decomposition done. (took in total 0.582516 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0309754 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=85.6109 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0522826 sec =72574.7 NTopnodes=30105 NTopleaves=26342 FOF: Start linking particles (presently allocated=97.371 MB) FOF: linking of small cells took 0.000901043 sec FOF: local links done (took 0.0712798 sec, avg-work=0.0617638, imbalance=1.13545). FOF: Marked=186658 out of the 72222103 primaries which are linked FOF: begin linking across processors (presently allocated=98.3881 MB) FOF: have done 20562 cross links (processed 186658, took 0.00404128 sec) FOF: have done 4020 cross links (processed 94579, took 0.00323167 sec) FOF: have done 698 cross links (processed 13708, took 0.00297822 sec) FOF: have done 107 cross links (processed 2261, took 0.00244786 sec) FOF: have done 18 cross links (processed 294, took 0.00238281 sec) FOF: have done 1 cross links (processed 56, took 0.00257048 sec) FOF: have done 0 cross links (processed 2, took 0.00229707 sec) FOF: Local groups found. FOF: primary group finding took = 0.0966028 sec FOF: Start finding nearest dm-particle (presently allocated=97.371 MB) FOF: fof-nearest iteration 1: need to repeat for 60633221 particles. (took = 0.0455935 sec) FOF: fof-nearest iteration 2: need to repeat for 55791956 particles. (took = 0.0485225 sec) FOF: fof-nearest iteration 3: need to repeat for 41360776 particles. (took = 0.0517401 sec) FOF: fof-nearest iteration 4: need to repeat for 19955163 particles. (took = 0.0458185 sec) FOF: fof-nearest iteration 5: need to repeat for 3945161 particles. (took = 0.0272198 sec) FOF: fof-nearest iteration 6: need to repeat for 93813 particles. (took = 0.00841627 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.231422 sec FOF: compiling local group data and catalogue took = 0.0134794 sec FOF: Total number of FOF groups with at least 32 particles: 3264118 FOF: Largest FOF group has 82 particles. FOF: Total number of particles in FOF groups: 133828920 FOF: group properties are now allocated.. (presently allocated=89.3823 MB) FOF: computation of group properties took = 0.00777804 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.255386 sec FOF: Finished computing FoF groups. Complete work took 0.786675 sec (presently allocated=86.9501 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.1382 MB) GRAVTREE: Tree construction done. took 0.211278 sec =89244.1 NTopnodes=30105 NTopleaves=26342 tree-build-scalability=0.663057 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 127976467 particles. (took 0.420329 sec) SUBFIND: ngb iteration 2: need to repeat for 120345114 particles. (took 0.338687 sec) SUBFIND: ngb iteration 3: need to repeat for 112519041 particles. (took 0.288026 sec) SUBFIND: ngb iteration 4: need to repeat for 105484070 particles. (took 0.25126 sec) SUBFIND: ngb iteration 5: need to repeat for 99329389 particles. (took 0.223391 sec) SUBFIND: ngb iteration 6: need to repeat for 92966024 particles. (took 0.207852 sec) SUBFIND: ngb iteration 7: need to repeat for 84816902 particles. (took 0.191089 sec) SUBFIND: ngb iteration 8: need to repeat for 75376278 particles. (took 0.166211 sec) SUBFIND: ngb iteration 9: need to repeat for 67913446 particles. (took 0.136109 sec) SUBFIND: ngb iteration 10: need to repeat for 63908388 particles. (took 0.113143 sec) SUBFIND: ngb iteration 11: need to repeat for 62313358 particles. (took 0.102357 sec) SUBFIND: ngb iteration 12: need to repeat for 61797509 particles. (took 0.100258 sec) SUBFIND: ngb iteration 13: need to repeat for 61656036 particles. (took 0.100668 sec) SUBFIND: ngb iteration 14: need to repeat for 61619358 particles. (took 0.100732 sec) SUBFIND: ngb iteration 15: need to repeat for 61610006 particles. (took 0.0981206 sec) SUBFIND: ngb iteration 16: need to repeat for 61607425 particles. (took 0.0937688 sec) SUBFIND: ngb iteration 17: need to repeat for 61606309 particles. (took 0.0879654 sec) SUBFIND: ngb iteration 18: need to repeat for 61605034 particles. (took 0.0817622 sec) SUBFIND: ngb iteration 19: need to repeat for 61602157 particles. (took 0.0769225 sec) SUBFIND: ngb iteration 20: need to repeat for 61595819 particles. (took 0.0751414 sec) SUBFIND: ngb iteration 21: need to repeat for 61582824 particles. (took 0.0754342 sec) SUBFIND: ngb iteration 22: need to repeat for 61555250 particles. (took 0.0771994 sec) SUBFIND: ngb iteration 23: need to repeat for 61493426 particles. (took 0.0795596 sec) SUBFIND: ngb iteration 24: need to repeat for 61362734 particles. (took 0.0827388 sec) SUBFIND: ngb iteration 25: need to repeat for 61080012 particles. (took 0.0871067 sec) SUBFIND: ngb iteration 26: need to repeat for 60481740 particles. (took 0.0928667 sec) SUBFIND: ngb iteration 27: need to repeat for 59303564 particles. (took 0.101759 sec) SUBFIND: ngb iteration 28: need to repeat for 57135606 particles. (took 0.112812 sec) SUBFIND: ngb iteration 29: need to repeat for 53613627 particles. (took 0.125487 sec) SUBFIND: ngb iteration 30: need to repeat for 48656058 particles. (took 0.139607 sec) SUBFIND: ngb iteration 31: need to repeat for 42684005 particles. (took 0.152252 sec) SUBFIND: ngb iteration 32: need to repeat for 36403824 particles. (took 0.15954 sec) SUBFIND: ngb iteration 33: need to repeat for 30358796 particles. (took 0.153667 sec) SUBFIND: ngb iteration 34: need to repeat for 24644190 particles. (took 0.139507 sec) SUBFIND: ngb iteration 35: need to repeat for 19165305 particles. (took 0.116183 sec) SUBFIND: ngb iteration 36: need to repeat for 14038945 particles. (took 0.0939514 sec) SUBFIND: ngb iteration 37: need to repeat for 9512763 particles. (took 0.0728909 sec) SUBFIND: ngb iteration 38: need to repeat for 5823876 particles. (took 0.0549612 sec) SUBFIND: ngb iteration 39: need to repeat for 3142168 particles. (took 0.0378895 sec) SUBFIND: ngb iteration 40: need to repeat for 1454738 particles. (took 0.0237973 sec) SUBFIND: ngb iteration 41: need to repeat for 560495 particles. (took 0.0137039 sec) SUBFIND: ngb iteration 42: need to repeat for 173813 particles. (took 0.0073039 sec) SUBFIND: ngb iteration 43: need to repeat for 42551 particles. (took 0.00354556 sec) SUBFIND: ngb iteration 44: need to repeat for 7710 particles. (took 0.00158401 sec) SUBFIND: ngb iteration 45: need to repeat for 1052 particles. (took 0.000657493 sec) SUBFIND: ngb iteration 46: need to repeat for 88 particles. (took 0.000345467 sec) SUBFIND: ngb iteration 47: need to repeat for 6 particles. (took 0.00025839 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 5.26431 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828961 particles, for threshold size factor 0.6) SUBFIND: The other 3264118 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00562932 sec SUBFIND: particle balance=1.12167 SUBFIND: subfind_exchange() took 0.234892 sec SUBFIND: particle balance for processing=1.00029 SUBFIND: subdomain decomposition took 0.0513831 sec SUBFIND: serial subfind subdomain decomposition took 0.0509339 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=3778 took 37.7885 sec SUBFIND: root-task=0: Serial processing of halo 0 took 37.9131 SUBFIND: Processing overall took (total time=41.2209 sec) SUBFIND: 0 out of 27 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258161 ALLOCATE: Changing to MaxPartSph = 118840 SUBFIND: subfind_exchange() (for return to original CPU) took 0.258076 sec TREE: Full tree construction for all particles. (presently allocated=79.7957 MB) GRAVTREE: Tree construction done. took 0.827311 sec =89244.1 NTopnodes=30105 NTopleaves=26342 tree-build-scalability=0.663057 SUBFIND: SO iteration 1: need to repeat for 3263992 halo centers. (took 0.0270103 sec) SUBFIND: SO iteration 2: need to repeat for 3263992 halo centers. (took 0.0273584 sec) SUBFIND: SO iteration 3: need to repeat for 3263992 halo centers. (took 0.0242087 sec) SUBFIND: SO iteration 4: need to repeat for 3263992 halo centers. (took 0.0238858 sec) SUBFIND: SO iteration 5: need to repeat for 3263992 halo centers. (took 0.0244141 sec) SUBFIND: SO iteration 6: need to repeat for 3263992 halo centers. (took 0.0238965 sec) SUBFIND: SO iteration 7: need to repeat for 3263992 halo centers. (took 0.0235343 sec) SUBFIND: SO iteration 8: need to repeat for 3263992 halo centers. (took 0.0235914 sec) SUBFIND: SO iteration 9: need to repeat for 3263992 halo centers. (took 0.0233857 sec) SUBFIND: SO iteration 10: need to repeat for 3263992 halo centers. (took 0.0232002 sec) SUBFIND: SO iteration 11: need to repeat for 3263992 halo centers. (took 0.0231881 sec) SUBFIND: SO iteration 12: need to repeat for 3263992 halo centers. (took 0.0232127 sec) SUBFIND: SO iteration 13: need to repeat for 3263992 halo centers. (took 0.0231745 sec) SUBFIND: SO iteration 14: need to repeat for 3263992 halo centers. (took 0.0232287 sec) SUBFIND: SO iteration 15: need to repeat for 3263992 halo centers. (took 0.0233355 sec) SUBFIND: SO iteration 16: need to repeat for 399474 halo centers. (took 0.022585 sec) SUBFIND: SO iteration 17: need to repeat for 5185 halo centers. (took 0.00966129 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000571057 sec) SUBFIND: SO iteration 1: need to repeat for 3263992 halo centers. (took 0.0235434 sec) SUBFIND: SO iteration 2: need to repeat for 3263992 halo centers. (took 0.0229946 sec) SUBFIND: SO iteration 3: need to repeat for 3263992 halo centers. (took 0.0231793 sec) SUBFIND: SO iteration 4: need to repeat for 3263992 halo centers. (took 0.0258156 sec) SUBFIND: SO iteration 5: need to repeat for 3263992 halo centers. (took 0.0265157 sec) SUBFIND: SO iteration 6: need to repeat for 3263992 halo centers. (took 0.0232074 sec) SUBFIND: SO iteration 7: need to repeat for 3263992 halo centers. (took 0.0239002 sec) SUBFIND: SO iteration 8: need to repeat for 3263992 halo centers. (took 0.0231883 sec) SUBFIND: SO iteration 9: need to repeat for 3263992 halo centers. (took 0.0233559 sec) SUBFIND: SO iteration 10: need to repeat for 3263992 halo centers. (took 0.0243307 sec) SUBFIND: SO iteration 11: need to repeat for 3263992 halo centers. (took 0.0231929 sec) SUBFIND: SO iteration 12: need to repeat for 3263992 halo centers. (took 0.0234229 sec) SUBFIND: SO iteration 13: need to repeat for 3263992 halo centers. (took 0.0232304 sec) SUBFIND: SO iteration 14: need to repeat for 3263992 halo centers. (took 0.023203 sec) SUBFIND: SO iteration 15: need to repeat for 3263992 halo centers. (took 0.0231324 sec) SUBFIND: SO iteration 16: need to repeat for 259289 halo centers. (took 0.0225686 sec) SUBFIND: SO iteration 17: need to repeat for 3994 halo centers. (took 0.0081795 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.000484414 sec) SUBFIND: SO iteration 1: need to repeat for 3263992 halo centers. (took 0.0232903 sec) SUBFIND: SO iteration 2: need to repeat for 3263992 halo centers. (took 0.0229509 sec) SUBFIND: SO iteration 3: need to repeat for 3263992 halo centers. (took 0.0235542 sec) SUBFIND: SO iteration 4: need to repeat for 3263992 halo centers. (took 0.023149 sec) SUBFIND: SO iteration 5: need to repeat for 3263992 halo centers. (took 0.0233165 sec) SUBFIND: SO iteration 6: need to repeat for 3263992 halo centers. (took 0.0231175 sec) SUBFIND: SO iteration 7: need to repeat for 3263992 halo centers. (took 0.023169 sec) SUBFIND: SO iteration 8: need to repeat for 3263992 halo centers. (took 0.0232514 sec) SUBFIND: SO iteration 9: need to repeat for 3263992 halo centers. (took 0.0234061 sec) SUBFIND: SO iteration 10: need to repeat for 3263992 halo centers. (took 0.0236277 sec) SUBFIND: SO iteration 11: need to repeat for 3263992 halo centers. (took 0.0232546 sec) SUBFIND: SO iteration 12: need to repeat for 3263992 halo centers. (took 0.0234609 sec) SUBFIND: SO iteration 13: need to repeat for 3263992 halo centers. (took 0.0233807 sec) SUBFIND: SO iteration 14: need to repeat for 3263992 halo centers. (took 0.0258889 sec) SUBFIND: SO iteration 15: need to repeat for 3263992 halo centers. (took 0.0235524 sec) SUBFIND: SO iteration 16: need to repeat for 411441 halo centers. (took 0.0248777 sec) SUBFIND: SO iteration 17: need to repeat for 5309 halo centers. (took 0.00981726 sec) SUBFIND: SO iteration 18: need to repeat for 1 halo centers. (took 0.00060177 sec) SUBFIND: SO iteration 1: need to repeat for 3263992 halo centers. (took 0.0233331 sec) SUBFIND: SO iteration 2: need to repeat for 3263992 halo centers. (took 0.0229629 sec) SUBFIND: SO iteration 3: need to repeat for 3263992 halo centers. (took 0.0222769 sec) SUBFIND: SO iteration 4: need to repeat for 3263992 halo centers. (took 0.0241723 sec) SUBFIND: SO iteration 5: need to repeat for 3263992 halo centers. (took 0.0226541 sec) SUBFIND: SO iteration 6: need to repeat for 3263992 halo centers. (took 0.0229146 sec) SUBFIND: SO iteration 7: need to repeat for 3263992 halo centers. (took 0.0225835 sec) SUBFIND: SO iteration 8: need to repeat for 3263992 halo centers. (took 0.0226346 sec) SUBFIND: SO iteration 9: need to repeat for 3263992 halo centers. (took 0.0226497 sec) SUBFIND: SO iteration 10: need to repeat for 3263992 halo centers. (took 0.0227519 sec) SUBFIND: SO iteration 11: need to repeat for 3263992 halo centers. (took 0.0227195 sec) SUBFIND: SO iteration 12: need to repeat for 3263992 halo centers. (took 0.0226671 sec) SUBFIND: SO iteration 13: need to repeat for 3263992 halo centers. (took 0.0226226 sec) SUBFIND: SO iteration 14: need to repeat for 3263992 halo centers. (took 0.0226058 sec) SUBFIND: SO iteration 15: need to repeat for 3263992 halo centers. (took 0.0226142 sec) SUBFIND: SO iteration 16: need to repeat for 2920008 halo centers. (took 0.022553 sec) SUBFIND: SO iteration 17: need to repeat for 267678 halo centers. (took 0.0207712 sec) SUBFIND: SO iteration 18: need to repeat for 41327 halo centers. (took 0.00814292 sec) SUBFIND: determining spherical overdensity masses took 1.56975 sec SUBFIND: assembled and ordered groups and subhalos (took 0.269648 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 12.3524 sec, total size 1220.24 MB, corresponds to effective I/O rate of 98.7851 MB/sec SUBFIND: Subgroup catalogues saved. took = 12.3541 sec SUBFIND: Finished with SUBFIND. (total time=62.2618 sec) SUBFIND: Total number of subhalos with at least 20 particles: 3264018 SUBFIND: Largest subhalo has 82 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133823504 FOF: preparing output order of particles took 0.92372 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 10.9537 sec, total size 5299.68 MB, corresponds to effective I/O rate of 483.827 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 126 (rank 126 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 120 (rank 120 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 121 (rank 121 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 125 (rank 125 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 135 (rank 135 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.