TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186468.38 Mb (on task= 621), Smallest = 186402.84 Mb (on task= 432), Average = 186425.72 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5112.49 Mb (on task= 432), Smallest = 5046.96 Mb (on task= 621), Average = 5089.60 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5112.49 Mb (on task= 432), Smallest = 5046.96 Mb (on task= 621), Average = 5089.60 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 0), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c106-162.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.9469 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 61744341 (tot= 61744341) masstab= 0 READIC: Type 1: 72084235 (tot= 72084235) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 389 (tot= 389) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.48365 sec, total size 6361.74 MB, corresponds to effective I/O rate of 1418.87 MB/sec READIC: Total number of particles : 133828965 INIT: Testing ID uniqueness... INIT: success. took=0.0583456 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=27336, determination of top-level tree involved 6 iterations and took 0.360655 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=185 for nextra=16, reaching maximum imbalance of 1.12101|1.12107 DOMAIN: combining multiple-domains took 0.0148959 sec DOMAIN: exchange of 72084624 particles DOMAIN: particle exchange done. (took 0.196934 sec) DOMAIN: domain decomposition done. (took in total 0.578158 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0309614 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=85.6785 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0509365 sec =72866.6 NTopnodes=31241 NTopleaves=27336 FOF: Start linking particles (presently allocated=97.2288 MB) FOF: linking of small cells took 0.000912311 sec FOF: local links done (took 0.0709261 sec, avg-work=0.0619503, imbalance=1.12947). FOF: Marked=184482 out of the 72084235 primaries which are linked FOF: begin linking across processors (presently allocated=98.208 MB) FOF: have done 19921 cross links (processed 184482, took 0.00392901 sec) FOF: have done 3939 cross links (processed 93954, took 0.00323694 sec) FOF: have done 640 cross links (processed 13409, took 0.00268811 sec) FOF: have done 85 cross links (processed 2023, took 0.00242909 sec) FOF: have done 10 cross links (processed 255, took 0.00233875 sec) FOF: have done 2 cross links (processed 29, took 0.00234115 sec) FOF: have done 0 cross links (processed 6, took 0.00234257 sec) FOF: Local groups found. FOF: primary group finding took = 0.0956039 sec FOF: Start finding nearest dm-particle (presently allocated=97.2288 MB) FOF: fof-nearest iteration 1: need to repeat for 60744514 particles. (took = 0.0453831 sec) FOF: fof-nearest iteration 2: need to repeat for 55784638 particles. (took = 0.0486656 sec) FOF: fof-nearest iteration 3: need to repeat for 41117332 particles. (took = 0.0522374 sec) FOF: fof-nearest iteration 4: need to repeat for 19586672 particles. (took = 0.0458865 sec) FOF: fof-nearest iteration 5: need to repeat for 3782000 particles. (took = 0.0273985 sec) FOF: fof-nearest iteration 6: need to repeat for 89453 particles. (took = 0.0080908 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.231687 sec FOF: compiling local group data and catalogue took = 0.0133719 sec FOF: Total number of FOF groups with at least 32 particles: 3096444 FOF: Largest FOF group has 86 particles. FOF: Total number of particles in FOF groups: 133828917 FOF: group properties are now allocated.. (presently allocated=89.2123 MB) FOF: computation of group properties took = 0.00763795 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.25931 sec FOF: Finished computing FoF groups. Complete work took 0.788122 sec (presently allocated=86.8903 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.0753 MB) GRAVTREE: Tree construction done. took 0.216915 sec =89427.6 NTopnodes=31241 NTopleaves=27336 tree-build-scalability=0.65106 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 131462285 particles. (took 0.446839 sec) SUBFIND: ngb iteration 2: need to repeat for 128213146 particles. (took 0.36355 sec) SUBFIND: ngb iteration 3: need to repeat for 124589547 particles. (took 0.31697 sec) SUBFIND: ngb iteration 4: need to repeat for 120794768 particles. (took 0.294564 sec) SUBFIND: ngb iteration 5: need to repeat for 116415105 particles. (took 0.277834 sec) SUBFIND: ngb iteration 6: need to repeat for 110135994 particles. (took 0.269763 sec) SUBFIND: ngb iteration 7: need to repeat for 99894984 particles. (took 0.256527 sec) SUBFIND: ngb iteration 8: need to repeat for 86004036 particles. (took 0.22654 sec) SUBFIND: ngb iteration 9: need to repeat for 73596064 particles. (took 0.18184 sec) SUBFIND: ngb iteration 10: need to repeat for 66374319 particles. (took 0.140114 sec) SUBFIND: ngb iteration 11: need to repeat for 63290102 particles. (took 0.116501 sec) SUBFIND: ngb iteration 12: need to repeat for 62219195 particles. (took 0.106421 sec) SUBFIND: ngb iteration 13: need to repeat for 61887056 particles. (took 0.1038 sec) SUBFIND: ngb iteration 14: need to repeat for 61787697 particles. (took 0.102057 sec) SUBFIND: ngb iteration 15: need to repeat for 61756835 particles. (took 0.099543 sec) SUBFIND: ngb iteration 16: need to repeat for 61747672 particles. (took 0.095111 sec) SUBFIND: ngb iteration 17: need to repeat for 61744722 particles. (took 0.0888958 sec) SUBFIND: ngb iteration 18: need to repeat for 61743141 particles. (took 0.0826188 sec) SUBFIND: ngb iteration 19: need to repeat for 61740720 particles. (took 0.0775323 sec) SUBFIND: ngb iteration 20: need to repeat for 61736189 particles. (took 0.0752528 sec) SUBFIND: ngb iteration 21: need to repeat for 61726750 particles. (took 0.0755929 sec) SUBFIND: ngb iteration 22: need to repeat for 61705796 particles. (took 0.0769284 sec) SUBFIND: ngb iteration 23: need to repeat for 61660648 particles. (took 0.0793968 sec) SUBFIND: ngb iteration 24: need to repeat for 61571478 particles. (took 0.0827517 sec) SUBFIND: ngb iteration 25: need to repeat for 61377850 particles. (took 0.0869867 sec) SUBFIND: ngb iteration 26: need to repeat for 60990422 particles. (took 0.0933248 sec) SUBFIND: ngb iteration 27: need to repeat for 60250851 particles. (took 0.101204 sec) SUBFIND: ngb iteration 28: need to repeat for 58935562 particles. (took 0.112756 sec) SUBFIND: ngb iteration 29: need to repeat for 56837213 particles. (took 0.128735 sec) SUBFIND: ngb iteration 30: need to repeat for 53881888 particles. (took 0.148204 sec) SUBFIND: ngb iteration 31: need to repeat for 50139208 particles. (took 0.166451 sec) SUBFIND: ngb iteration 32: need to repeat for 45807835 particles. (took 0.180262 sec) SUBFIND: ngb iteration 33: need to repeat for 40948967 particles. (took 0.184369 sec) SUBFIND: ngb iteration 34: need to repeat for 35474067 particles. (took 0.174431 sec) SUBFIND: ngb iteration 35: need to repeat for 29357811 particles. (took 0.155818 sec) SUBFIND: ngb iteration 36: need to repeat for 22839816 particles. (took 0.13421 sec) SUBFIND: ngb iteration 37: need to repeat for 16407609 particles. (took 0.110386 sec) SUBFIND: ngb iteration 38: need to repeat for 10659733 particles. (took 0.0856521 sec) SUBFIND: ngb iteration 39: need to repeat for 6119877 particles. (took 0.0615666 sec) SUBFIND: ngb iteration 40: need to repeat for 3018659 particles. (took 0.0404876 sec) SUBFIND: ngb iteration 41: need to repeat for 1241455 particles. (took 0.0240615 sec) SUBFIND: ngb iteration 42: need to repeat for 409979 particles. (took 0.0124923 sec) SUBFIND: ngb iteration 43: need to repeat for 104914 particles. (took 0.00570731 sec) SUBFIND: ngb iteration 44: need to repeat for 20033 particles. (took 0.00263494 sec) SUBFIND: ngb iteration 45: need to repeat for 2789 particles. (took 0.000979891 sec) SUBFIND: ngb iteration 46: need to repeat for 233 particles. (took 0.000434689 sec) SUBFIND: ngb iteration 47: need to repeat for 14 particles. (took 0.000329336 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 6.0525 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828965 particles, for threshold size factor 0.6) SUBFIND: The other 3096444 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00546313 sec SUBFIND: particle balance=1.12101 SUBFIND: subfind_exchange() took 0.235191 sec SUBFIND: particle balance for processing=1.00031 SUBFIND: subdomain decomposition took 0.0512993 sec SUBFIND: serial subfind subdomain decomposition took 0.0506973 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=3584 took 36.5568 sec SUBFIND: root-task=0: Serial processing of halo 0 took 36.6808 SUBFIND: Processing overall took (total time=39.0769 sec) SUBFIND: 0 out of 199 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258160 ALLOCATE: Changing to MaxPartSph = 119106 SUBFIND: subfind_exchange() (for return to original CPU) took 0.256824 sec TREE: Full tree construction for all particles. (presently allocated=79.1015 MB) GRAVTREE: Tree construction done. took 0.841797 sec =89427.6 NTopnodes=31241 NTopleaves=27336 tree-build-scalability=0.65106 SUBFIND: SO iteration 1: need to repeat for 3096355 halo centers. (took 0.0251108 sec) SUBFIND: SO iteration 2: need to repeat for 3096355 halo centers. (took 0.0226672 sec) SUBFIND: SO iteration 3: need to repeat for 3096355 halo centers. (took 0.022802 sec) SUBFIND: SO iteration 4: need to repeat for 3096355 halo centers. (took 0.0226109 sec) SUBFIND: SO iteration 5: need to repeat for 3096355 halo centers. (took 0.0225706 sec) SUBFIND: SO iteration 6: need to repeat for 3096355 halo centers. (took 0.022762 sec) SUBFIND: SO iteration 7: need to repeat for 3096355 halo centers. (took 0.0225666 sec) SUBFIND: SO iteration 8: need to repeat for 3096355 halo centers. (took 0.0226443 sec) SUBFIND: SO iteration 9: need to repeat for 3096355 halo centers. (took 0.0226738 sec) SUBFIND: SO iteration 10: need to repeat for 3096355 halo centers. (took 0.0226868 sec) SUBFIND: SO iteration 11: need to repeat for 3096355 halo centers. (took 0.0225597 sec) SUBFIND: SO iteration 12: need to repeat for 3096355 halo centers. (took 0.0226288 sec) SUBFIND: SO iteration 13: need to repeat for 3096355 halo centers. (took 0.0225977 sec) SUBFIND: SO iteration 14: need to repeat for 3096355 halo centers. (took 0.0225755 sec) SUBFIND: SO iteration 15: need to repeat for 3096355 halo centers. (took 0.0225712 sec) SUBFIND: SO iteration 16: need to repeat for 376963 halo centers. (took 0.0219915 sec) SUBFIND: SO iteration 17: need to repeat for 4339 halo centers. (took 0.00944007 sec) SUBFIND: SO iteration 1: need to repeat for 3096355 halo centers. (took 0.022729 sec) SUBFIND: SO iteration 2: need to repeat for 3096355 halo centers. (took 0.0223009 sec) SUBFIND: SO iteration 3: need to repeat for 3096355 halo centers. (took 0.02259 sec) SUBFIND: SO iteration 4: need to repeat for 3096355 halo centers. (took 0.0225868 sec) SUBFIND: SO iteration 5: need to repeat for 3096355 halo centers. (took 0.0225847 sec) SUBFIND: SO iteration 6: need to repeat for 3096355 halo centers. (took 0.0226941 sec) SUBFIND: SO iteration 7: need to repeat for 3096355 halo centers. (took 0.0225561 sec) SUBFIND: SO iteration 8: need to repeat for 3096355 halo centers. (took 0.0226324 sec) SUBFIND: SO iteration 9: need to repeat for 3096355 halo centers. (took 0.0226092 sec) SUBFIND: SO iteration 10: need to repeat for 3096355 halo centers. (took 0.0226044 sec) SUBFIND: SO iteration 11: need to repeat for 3096355 halo centers. (took 0.0226077 sec) SUBFIND: SO iteration 12: need to repeat for 3096355 halo centers. (took 0.0229024 sec) SUBFIND: SO iteration 13: need to repeat for 3096355 halo centers. (took 0.022919 sec) SUBFIND: SO iteration 14: need to repeat for 3096355 halo centers. (took 0.0232105 sec) SUBFIND: SO iteration 15: need to repeat for 3096354 halo centers. (took 0.02298 sec) SUBFIND: SO iteration 16: need to repeat for 225983 halo centers. (took 0.0223212 sec) SUBFIND: SO iteration 17: need to repeat for 2764 halo centers. (took 0.00783561 sec) SUBFIND: SO iteration 1: need to repeat for 3096355 halo centers. (took 0.0230791 sec) SUBFIND: SO iteration 2: need to repeat for 3096355 halo centers. (took 0.0225342 sec) SUBFIND: SO iteration 3: need to repeat for 3096355 halo centers. (took 0.0225622 sec) SUBFIND: SO iteration 4: need to repeat for 3096355 halo centers. (took 0.0229424 sec) SUBFIND: SO iteration 5: need to repeat for 3096355 halo centers. (took 0.0226407 sec) SUBFIND: SO iteration 6: need to repeat for 3096355 halo centers. (took 0.0225037 sec) SUBFIND: SO iteration 7: need to repeat for 3096355 halo centers. (took 0.0225459 sec) SUBFIND: SO iteration 8: need to repeat for 3096355 halo centers. (took 0.0225906 sec) SUBFIND: SO iteration 9: need to repeat for 3096355 halo centers. (took 0.0225648 sec) SUBFIND: SO iteration 10: need to repeat for 3096355 halo centers. (took 0.0225572 sec) SUBFIND: SO iteration 11: need to repeat for 3096355 halo centers. (took 0.0225413 sec) SUBFIND: SO iteration 12: need to repeat for 3096355 halo centers. (took 0.0225667 sec) SUBFIND: SO iteration 13: need to repeat for 3096355 halo centers. (took 0.0228421 sec) SUBFIND: SO iteration 14: need to repeat for 3096355 halo centers. (took 0.0225706 sec) SUBFIND: SO iteration 15: need to repeat for 3096355 halo centers. (took 0.0225983 sec) SUBFIND: SO iteration 16: need to repeat for 380018 halo centers. (took 0.0219393 sec) SUBFIND: SO iteration 17: need to repeat for 4477 halo centers. (took 0.00949665 sec) SUBFIND: SO iteration 1: need to repeat for 3096355 halo centers. (took 0.0225985 sec) SUBFIND: SO iteration 2: need to repeat for 3096355 halo centers. (took 0.0223728 sec) SUBFIND: SO iteration 3: need to repeat for 3096355 halo centers. (took 0.021714 sec) SUBFIND: SO iteration 4: need to repeat for 3096355 halo centers. (took 0.0220583 sec) SUBFIND: SO iteration 5: need to repeat for 3096355 halo centers. (took 0.0220538 sec) SUBFIND: SO iteration 6: need to repeat for 3096355 halo centers. (took 0.0220475 sec) SUBFIND: SO iteration 7: need to repeat for 3096355 halo centers. (took 0.0220579 sec) SUBFIND: SO iteration 8: need to repeat for 3096355 halo centers. (took 0.0220667 sec) SUBFIND: SO iteration 9: need to repeat for 3096355 halo centers. (took 0.022142 sec) SUBFIND: SO iteration 10: need to repeat for 3096355 halo centers. (took 0.0220907 sec) SUBFIND: SO iteration 11: need to repeat for 3096355 halo centers. (took 0.0219996 sec) SUBFIND: SO iteration 12: need to repeat for 3096355 halo centers. (took 0.0222934 sec) SUBFIND: SO iteration 13: need to repeat for 3096355 halo centers. (took 0.0221189 sec) SUBFIND: SO iteration 14: need to repeat for 3096355 halo centers. (took 0.0220418 sec) SUBFIND: SO iteration 15: need to repeat for 3096355 halo centers. (took 0.0220312 sec) SUBFIND: SO iteration 16: need to repeat for 2751612 halo centers. (took 0.0219451 sec) SUBFIND: SO iteration 17: need to repeat for 222043 halo centers. (took 0.0201982 sec) SUBFIND: SO iteration 18: need to repeat for 33050 halo centers. (took 0.00745627 sec) SUBFIND: determining spherical overdensity masses took 1.50423 sec SUBFIND: assembled and ordered groups and subhalos (took 0.302926 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 5.62956 sec, total size 1157.6 MB, corresponds to effective I/O rate of 205.628 MB/sec SUBFIND: Subgroup catalogues saved. took = 5.63122 sec SUBFIND: Finished with SUBFIND. (total time=54.1688 sec) SUBFIND: Total number of subhalos with at least 20 particles: 3096553 SUBFIND: Largest subhalo has 86 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133824841 FOF: preparing output order of particles took 0.916827 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 9.544 sec, total size 5301.26 MB, corresponds to effective I/O rate of 555.455 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 378 (rank 378 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 388 (rank 388 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 368 (rank 368 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.