TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186483.68 Mb (on task= 621), Smallest = 186398.90 Mb (on task= 432), Average = 186428.83 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5116.43 Mb (on task= 432), Smallest = 5031.66 Mb (on task= 621), Average = 5086.50 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5116.43 Mb (on task= 432), Smallest = 5031.66 Mb (on task= 621), Average = 5086.50 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 21), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c106-162.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.1696 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 61981661 (tot= 61981661) masstab= 0 READIC: Type 1: 71846796 (tot= 71846796) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 504 (tot= 504) masstab= 0 READIC: Type 5: 1 (tot= 1) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.28795 sec, total size 6362.64 MB, corresponds to effective I/O rate of 1483.84 MB/sec READIC: Total number of particles : 133828962 INIT: Testing ID uniqueness... INIT: success. took=0.0666853 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=30696, determination of top-level tree involved 6 iterations and took 0.444034 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=180 for nextra=80, reaching maximum imbalance of 1.11628|1.11683 DOMAIN: combining multiple-domains took 0.0238632 sec DOMAIN: exchange of 71847301 particles DOMAIN: particle exchange done. (took 0.215392 sec) DOMAIN: domain decomposition done. (took in total 0.689082 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0308336 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=85.8235 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0523277 sec =75441.2 NTopnodes=35081 NTopleaves=30696 FOF: Start linking particles (presently allocated=97.4251 MB) FOF: linking of small cells took 0.000836933 sec FOF: local links done (took 0.0712411 sec, avg-work=0.0623229, imbalance=1.12114). FOF: Marked=177690 out of the 71846796 primaries which are linked FOF: begin linking across processors (presently allocated=98.4282 MB) FOF: have done 18547 cross links (processed 177690, took 0.00573851 sec) FOF: have done 3723 cross links (processed 90515, took 0.00461807 sec) FOF: have done 598 cross links (processed 13210, took 0.00485253 sec) FOF: have done 86 cross links (processed 2022, took 0.00277481 sec) FOF: have done 8 cross links (processed 259, took 0.00285639 sec) FOF: have done 2 cross links (processed 28, took 0.0026502 sec) FOF: have done 0 cross links (processed 4, took 0.00257403 sec) FOF: Local groups found. FOF: primary group finding took = 0.10305 sec FOF: Start finding nearest dm-particle (presently allocated=97.4251 MB) FOF: fof-nearest iteration 1: need to repeat for 60940434 particles. (took = 0.0498057 sec) FOF: fof-nearest iteration 2: need to repeat for 55792692 particles. (took = 0.0515108 sec) FOF: fof-nearest iteration 3: need to repeat for 40724884 particles. (took = 0.0533634 sec) FOF: fof-nearest iteration 4: need to repeat for 18978242 particles. (took = 0.0458771 sec) FOF: fof-nearest iteration 5: need to repeat for 3535250 particles. (took = 0.0267729 sec) FOF: fof-nearest iteration 6: need to repeat for 82395 particles. (took = 0.00798173 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.239351 sec FOF: compiling local group data and catalogue took = 0.0134671 sec FOF: Total number of FOF groups with at least 32 particles: 2862737 FOF: Largest FOF group has 94 particles. FOF: Total number of particles in FOF groups: 133828954 FOF: group properties are now allocated.. (presently allocated=89.3091 MB) FOF: computation of group properties took = 0.00725891 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.269242 sec FOF: Finished computing FoF groups. Complete work took 0.818008 sec (presently allocated=86.9567 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.1197 MB) GRAVTREE: Tree construction done. took 0.211559 sec =91880.4 NTopnodes=35081 NTopleaves=30696 tree-build-scalability=0.61863 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133357825 particles. (took 0.44516 sec) SUBFIND: ngb iteration 2: need to repeat for 132605768 particles. (took 0.372034 sec) SUBFIND: ngb iteration 3: need to repeat for 131509097 particles. (took 0.344106 sec) SUBFIND: ngb iteration 4: need to repeat for 129818273 particles. (took 0.322744 sec) SUBFIND: ngb iteration 5: need to repeat for 126927270 particles. (took 0.310142 sec) SUBFIND: ngb iteration 6: need to repeat for 121527560 particles. (took 0.309776 sec) SUBFIND: ngb iteration 7: need to repeat for 111402275 particles. (took 0.297761 sec) SUBFIND: ngb iteration 8: need to repeat for 95653337 particles. (took 0.268508 sec) SUBFIND: ngb iteration 9: need to repeat for 79356378 particles. (took 0.220013 sec) SUBFIND: ngb iteration 10: need to repeat for 68992770 particles. (took 0.164543 sec) SUBFIND: ngb iteration 11: need to repeat for 64347078 particles. (took 0.129104 sec) SUBFIND: ngb iteration 12: need to repeat for 62703749 particles. (took 0.115842 sec) SUBFIND: ngb iteration 13: need to repeat for 62197490 particles. (took 0.109785 sec) SUBFIND: ngb iteration 14: need to repeat for 62048399 particles. (took 0.10762 sec) SUBFIND: ngb iteration 15: need to repeat for 62003406 particles. (took 0.104427 sec) SUBFIND: ngb iteration 16: need to repeat for 61988320 particles. (took 0.100061 sec) SUBFIND: ngb iteration 17: need to repeat for 61983252 particles. (took 0.0929646 sec) SUBFIND: ngb iteration 18: need to repeat for 61980710 particles. (took 0.0857301 sec) SUBFIND: ngb iteration 19: need to repeat for 61978426 particles. (took 0.0806356 sec) SUBFIND: ngb iteration 20: need to repeat for 61974921 particles. (took 0.07792 sec) SUBFIND: ngb iteration 21: need to repeat for 61968147 particles. (took 0.0778399 sec) SUBFIND: ngb iteration 22: need to repeat for 61955756 particles. (took 0.0792705 sec) SUBFIND: ngb iteration 23: need to repeat for 61930928 particles. (took 0.0812586 sec) SUBFIND: ngb iteration 24: need to repeat for 61885213 particles. (took 0.0840308 sec) SUBFIND: ngb iteration 25: need to repeat for 61792979 particles. (took 0.0880625 sec) SUBFIND: ngb iteration 26: need to repeat for 61614596 particles. (took 0.0941051 sec) SUBFIND: ngb iteration 27: need to repeat for 61285644 particles. (took 0.102562 sec) SUBFIND: ngb iteration 28: need to repeat for 60710725 particles. (took 0.114731 sec) SUBFIND: ngb iteration 29: need to repeat for 59771756 particles. (took 0.131556 sec) SUBFIND: ngb iteration 30: need to repeat for 58365826 particles. (took 0.154685 sec) SUBFIND: ngb iteration 31: need to repeat for 56369219 particles. (took 0.178415 sec) SUBFIND: ngb iteration 32: need to repeat for 53610002 particles. (took 0.203269 sec) SUBFIND: ngb iteration 33: need to repeat for 49880315 particles. (took 0.212165 sec) SUBFIND: ngb iteration 34: need to repeat for 44972126 particles. (took 0.207601 sec) SUBFIND: ngb iteration 35: need to repeat for 38827316 particles. (took 0.190401 sec) SUBFIND: ngb iteration 36: need to repeat for 31656350 particles. (took 0.168042 sec) SUBFIND: ngb iteration 37: need to repeat for 23968170 particles. (took 0.142699 sec) SUBFIND: ngb iteration 38: need to repeat for 16543935 particles. (took 0.116075 sec) SUBFIND: ngb iteration 39: need to repeat for 10171003 particles. (took 0.0874163 sec) SUBFIND: ngb iteration 40: need to repeat for 5411706 particles. (took 0.0616875 sec) SUBFIND: ngb iteration 41: need to repeat for 2426326 particles. (took 0.0385299 sec) SUBFIND: ngb iteration 42: need to repeat for 879167 particles. (took 0.0223687 sec) SUBFIND: ngb iteration 43: need to repeat for 245132 particles. (took 0.00997174 sec) SUBFIND: ngb iteration 44: need to repeat for 51967 particles. (took 0.00427322 sec) SUBFIND: ngb iteration 45: need to repeat for 7533 particles. (took 0.00175269 sec) SUBFIND: ngb iteration 46: need to repeat for 691 particles. (took 0.000682771 sec) SUBFIND: ngb iteration 47: need to repeat for 35 particles. (took 0.000329996 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 6.71676 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828962 particles, for threshold size factor 0.6) SUBFIND: The other 2862737 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00607822 sec SUBFIND: particle balance=1.11622 SUBFIND: subfind_exchange() took 0.233705 sec SUBFIND: particle balance for processing=1.0005 SUBFIND: subdomain decomposition took 0.0511418 sec SUBFIND: serial subfind subdomain decomposition took 0.050857 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=3314 took 32.9295 sec SUBFIND: root-task=0: Serial processing of halo 0 took 33.053 SUBFIND: Processing overall took (total time=35.5065 sec) SUBFIND: 0 out of 839 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258163 ALLOCATE: Changing to MaxPartSph = 119565 SUBFIND: subfind_exchange() (for return to original CPU) took 0.259336 sec TREE: Full tree construction for all particles. (presently allocated=79.3699 MB) GRAVTREE: Tree construction done. took 0.770804 sec =91880.4 NTopnodes=35081 NTopleaves=30696 tree-build-scalability=0.61863 SUBFIND: SO iteration 1: need to repeat for 2862677 halo centers. (took 0.0253295 sec) SUBFIND: SO iteration 2: need to repeat for 2862677 halo centers. (took 0.0234515 sec) SUBFIND: SO iteration 3: need to repeat for 2862677 halo centers. (took 0.0231473 sec) SUBFIND: SO iteration 4: need to repeat for 2862677 halo centers. (took 0.0233572 sec) SUBFIND: SO iteration 5: need to repeat for 2862677 halo centers. (took 0.0276314 sec) SUBFIND: SO iteration 6: need to repeat for 2862677 halo centers. (took 0.0234352 sec) SUBFIND: SO iteration 7: need to repeat for 2862677 halo centers. (took 0.0224072 sec) SUBFIND: SO iteration 8: need to repeat for 2862677 halo centers. (took 0.0226787 sec) SUBFIND: SO iteration 9: need to repeat for 2862677 halo centers. (took 0.0221465 sec) SUBFIND: SO iteration 10: need to repeat for 2862677 halo centers. (took 0.0223233 sec) SUBFIND: SO iteration 11: need to repeat for 2862677 halo centers. (took 0.0221683 sec) SUBFIND: SO iteration 12: need to repeat for 2862677 halo centers. (took 0.023021 sec) SUBFIND: SO iteration 13: need to repeat for 2862677 halo centers. (took 0.021973 sec) SUBFIND: SO iteration 14: need to repeat for 2862677 halo centers. (took 0.0219676 sec) SUBFIND: SO iteration 15: need to repeat for 2862677 halo centers. (took 0.0220006 sec) SUBFIND: SO iteration 16: need to repeat for 319693 halo centers. (took 0.0215426 sec) SUBFIND: SO iteration 17: need to repeat for 3241 halo centers. (took 0.00895526 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000455366 sec) SUBFIND: SO iteration 1: need to repeat for 2862677 halo centers. (took 0.0221026 sec) SUBFIND: SO iteration 2: need to repeat for 2862677 halo centers. (took 0.0216944 sec) SUBFIND: SO iteration 3: need to repeat for 2862677 halo centers. (took 0.0220408 sec) SUBFIND: SO iteration 4: need to repeat for 2862677 halo centers. (took 0.0219672 sec) SUBFIND: SO iteration 5: need to repeat for 2862677 halo centers. (took 0.021977 sec) SUBFIND: SO iteration 6: need to repeat for 2862677 halo centers. (took 0.0220208 sec) SUBFIND: SO iteration 7: need to repeat for 2862677 halo centers. (took 0.0222596 sec) SUBFIND: SO iteration 8: need to repeat for 2862677 halo centers. (took 0.0219542 sec) SUBFIND: SO iteration 9: need to repeat for 2862677 halo centers. (took 0.0219787 sec) SUBFIND: SO iteration 10: need to repeat for 2862677 halo centers. (took 0.0221253 sec) SUBFIND: SO iteration 11: need to repeat for 2862677 halo centers. (took 0.0221128 sec) SUBFIND: SO iteration 12: need to repeat for 2862677 halo centers. (took 0.0219945 sec) SUBFIND: SO iteration 13: need to repeat for 2862677 halo centers. (took 0.0220924 sec) SUBFIND: SO iteration 14: need to repeat for 2862677 halo centers. (took 0.0220246 sec) SUBFIND: SO iteration 15: need to repeat for 2862677 halo centers. (took 0.022314 sec) SUBFIND: SO iteration 16: need to repeat for 190383 halo centers. (took 0.021614 sec) SUBFIND: SO iteration 17: need to repeat for 1618 halo centers. (took 0.00702415 sec) SUBFIND: SO iteration 18: need to repeat for 2 halo centers. (took 0.000354845 sec) SUBFIND: SO iteration 1: need to repeat for 2862677 halo centers. (took 0.022165 sec) SUBFIND: SO iteration 2: need to repeat for 2862677 halo centers. (took 0.0217632 sec) SUBFIND: SO iteration 3: need to repeat for 2862677 halo centers. (took 0.0219165 sec) SUBFIND: SO iteration 4: need to repeat for 2862677 halo centers. (took 0.022603 sec) SUBFIND: SO iteration 5: need to repeat for 2862677 halo centers. (took 0.0220291 sec) SUBFIND: SO iteration 6: need to repeat for 2862677 halo centers. (took 0.0220142 sec) SUBFIND: SO iteration 7: need to repeat for 2862677 halo centers. (took 0.0219594 sec) SUBFIND: SO iteration 8: need to repeat for 2862677 halo centers. (took 0.0219194 sec) SUBFIND: SO iteration 9: need to repeat for 2862677 halo centers. (took 0.0219934 sec) SUBFIND: SO iteration 10: need to repeat for 2862677 halo centers. (took 0.0221134 sec) SUBFIND: SO iteration 11: need to repeat for 2862677 halo centers. (took 0.0219162 sec) SUBFIND: SO iteration 12: need to repeat for 2862677 halo centers. (took 0.0219885 sec) SUBFIND: SO iteration 13: need to repeat for 2862677 halo centers. (took 0.0221485 sec) SUBFIND: SO iteration 14: need to repeat for 2862677 halo centers. (took 0.0220749 sec) SUBFIND: SO iteration 15: need to repeat for 2862677 halo centers. (took 0.0222256 sec) SUBFIND: SO iteration 16: need to repeat for 325313 halo centers. (took 0.0219305 sec) SUBFIND: SO iteration 17: need to repeat for 3442 halo centers. (took 0.00905694 sec) SUBFIND: SO iteration 18: need to repeat for 3 halo centers. (took 0.000432465 sec) SUBFIND: SO iteration 1: need to repeat for 2862677 halo centers. (took 0.0220831 sec) SUBFIND: SO iteration 2: need to repeat for 2862677 halo centers. (took 0.0218288 sec) SUBFIND: SO iteration 3: need to repeat for 2862677 halo centers. (took 0.0214973 sec) SUBFIND: SO iteration 4: need to repeat for 2862677 halo centers. (took 0.0219212 sec) SUBFIND: SO iteration 5: need to repeat for 2862677 halo centers. (took 0.0215666 sec) SUBFIND: SO iteration 6: need to repeat for 2862677 halo centers. (took 0.0219101 sec) SUBFIND: SO iteration 7: need to repeat for 2862677 halo centers. (took 0.0215009 sec) SUBFIND: SO iteration 8: need to repeat for 2862677 halo centers. (took 0.0215697 sec) SUBFIND: SO iteration 9: need to repeat for 2862677 halo centers. (took 0.0216253 sec) SUBFIND: SO iteration 10: need to repeat for 2862677 halo centers. (took 0.0216961 sec) SUBFIND: SO iteration 11: need to repeat for 2862677 halo centers. (took 0.0215706 sec) SUBFIND: SO iteration 12: need to repeat for 2862677 halo centers. (took 0.0215536 sec) SUBFIND: SO iteration 13: need to repeat for 2862677 halo centers. (took 0.0216391 sec) SUBFIND: SO iteration 14: need to repeat for 2862677 halo centers. (took 0.0215436 sec) SUBFIND: SO iteration 15: need to repeat for 2862677 halo centers. (took 0.0217442 sec) SUBFIND: SO iteration 16: need to repeat for 2516314 halo centers. (took 0.0214695 sec) SUBFIND: SO iteration 17: need to repeat for 174556 halo centers. (took 0.0195967 sec) SUBFIND: SO iteration 18: need to repeat for 23446 halo centers. (took 0.00660773 sec) SUBFIND: determining spherical overdensity masses took 1.47904 sec SUBFIND: assembled and ordered groups and subhalos (took 0.267171 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 5.98186 sec, total size 1070.37 MB, corresponds to effective I/O rate of 178.935 MB/sec SUBFIND: Subgroup catalogues saved. took = 5.9834 sec SUBFIND: Finished with SUBFIND. (total time=51.4785 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2863516 SUBFIND: Largest subhalo has 94 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133825915 FOF: preparing output order of particles took 0.938622 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.25929 sec, total size 5303.98 MB, corresponds to effective I/O rate of 642.183 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 23 (rank 23 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 675 (rank 675 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 3 (rank 3 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 687 (rank 687 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 692 (rank 692 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 854 (rank 854 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 831 (rank 831 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 833 (rank 833 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 836 (rank 836 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.