TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186462.45 Mb (on task= 621), Smallest = 186396.48 Mb (on task= 432), Average = 186426.98 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5118.86 Mb (on task= 432), Smallest = 5052.89 Mb (on task= 621), Average = 5088.35 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5118.86 Mb (on task= 432), Smallest = 5052.89 Mb (on task= 621), Average = 5088.35 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 0), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c106-162.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.1492 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 62626120 (tot= 62626120) masstab= 0 READIC: Type 1: 71201704 (tot= 71201704) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 1090 (tot= 1090) masstab= 0 READIC: Type 5: 1 (tot= 1) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.3861 sec, total size 6365.1 MB, corresponds to effective I/O rate of 1451.2 MB/sec READIC: Total number of particles : 133828915 INIT: Testing ID uniqueness... INIT: success. took=0.0596687 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=32838, determination of top-level tree involved 6 iterations and took 0.385678 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=175 for nextra=125, reaching maximum imbalance of 1.1119|1.11203 DOMAIN: combining multiple-domains took 0.0157936 sec DOMAIN: exchange of 71202795 particles DOMAIN: particle exchange done. (took 0.216694 sec) DOMAIN: domain decomposition done. (took in total 0.623852 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0330613 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=86.0996 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0515726 sec =74874.4 NTopnodes=37529 NTopleaves=32838 FOF: Start linking particles (presently allocated=97.8963 MB) FOF: linking of small cells took 0.000766417 sec FOF: local links done (took 0.0724936 sec, avg-work=0.0631823, imbalance=1.12733). FOF: Marked=170595 out of the 71201704 primaries which are linked FOF: begin linking across processors (presently allocated=98.9355 MB) FOF: have done 16751 cross links (processed 170595, took 0.00388688 sec) FOF: have done 3357 cross links (processed 86639, took 0.003165 sec) FOF: have done 553 cross links (processed 11980, took 0.00264901 sec) FOF: have done 87 cross links (processed 1901, took 0.0024135 sec) FOF: have done 11 cross links (processed 281, took 0.00233829 sec) FOF: have done 2 cross links (processed 32, took 0.00232388 sec) FOF: have done 1 cross links (processed 4, took 0.00226657 sec) FOF: have done 0 cross links (processed 3, took 0.00234477 sec) FOF: Local groups found. FOF: primary group finding took = 0.0993624 sec FOF: Start finding nearest dm-particle (presently allocated=97.8963 MB) FOF: fof-nearest iteration 1: need to repeat for 61468834 particles. (took = 0.0457196 sec) FOF: fof-nearest iteration 2: need to repeat for 55797483 particles. (took = 0.0489056 sec) FOF: fof-nearest iteration 3: need to repeat for 39638053 particles. (took = 0.0527445 sec) FOF: fof-nearest iteration 4: need to repeat for 17432537 particles. (took = 0.0452877 sec) FOF: fof-nearest iteration 5: need to repeat for 3014672 particles. (took = 0.0252924 sec) FOF: fof-nearest iteration 6: need to repeat for 69240 particles. (took = 0.00715749 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.229205 sec FOF: compiling local group data and catalogue took = 0.0131001 sec FOF: Total number of FOF groups with at least 32 particles: 2399431 FOF: Largest FOF group has 112 particles. FOF: Total number of particles in FOF groups: 133828908 FOF: group properties are now allocated.. (presently allocated=89.5529 MB) FOF: computation of group properties took = 0.00665844 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.249007 sec FOF: Finished computing FoF groups. Complete work took 0.77346 sec (presently allocated=87.0995 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.2425 MB) GRAVTREE: Tree construction done. took 0.217453 sec =91067.2 NTopnodes=37529 NTopleaves=32838 tree-build-scalability=0.588375 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 128017743 particles. (took 0.413736 sec) SUBFIND: ngb iteration 2: need to repeat for 121802406 particles. (took 0.346248 sec) SUBFIND: ngb iteration 3: need to repeat for 116035789 particles. (took 0.306312 sec) SUBFIND: ngb iteration 4: need to repeat for 111057693 particles. (took 0.277973 sec) SUBFIND: ngb iteration 5: need to repeat for 106381149 particles. (took 0.263015 sec) SUBFIND: ngb iteration 6: need to repeat for 100711406 particles. (took 0.252117 sec) SUBFIND: ngb iteration 7: need to repeat for 92243168 particles. (took 0.235439 sec) SUBFIND: ngb iteration 8: need to repeat for 81325167 particles. (took 0.208043 sec) SUBFIND: ngb iteration 9: need to repeat for 71902890 particles. (took 0.171362 sec) SUBFIND: ngb iteration 10: need to repeat for 66388677 particles. (took 0.140232 sec) SUBFIND: ngb iteration 11: need to repeat for 63940968 particles. (took 0.123404 sec) SUBFIND: ngb iteration 12: need to repeat for 63052093 particles. (took 0.118529 sec) SUBFIND: ngb iteration 13: need to repeat for 62765143 particles. (took 0.118518 sec) SUBFIND: ngb iteration 14: need to repeat for 62673439 particles. (took 0.118192 sec) SUBFIND: ngb iteration 15: need to repeat for 62643014 particles. (took 0.115485 sec) SUBFIND: ngb iteration 16: need to repeat for 62628361 particles. (took 0.109765 sec) SUBFIND: ngb iteration 17: need to repeat for 62609712 particles. (took 0.102314 sec) SUBFIND: ngb iteration 18: need to repeat for 62576164 particles. (took 0.0950351 sec) SUBFIND: ngb iteration 19: need to repeat for 62524060 particles. (took 0.0888807 sec) SUBFIND: ngb iteration 20: need to repeat for 62450159 particles. (took 0.0858165 sec) SUBFIND: ngb iteration 21: need to repeat for 62346561 particles. (took 0.0855135 sec) SUBFIND: ngb iteration 22: need to repeat for 62194622 particles. (took 0.0865913 sec) SUBFIND: ngb iteration 23: need to repeat for 61964968 particles. (took 0.0883793 sec) SUBFIND: ngb iteration 24: need to repeat for 61615208 particles. (took 0.091592 sec) SUBFIND: ngb iteration 25: need to repeat for 61072367 particles. (took 0.0949433 sec) SUBFIND: ngb iteration 26: need to repeat for 60240898 particles. (took 0.100799 sec) SUBFIND: ngb iteration 27: need to repeat for 58970959 particles. (took 0.108706 sec) SUBFIND: ngb iteration 28: need to repeat for 57113859 particles. (took 0.120364 sec) SUBFIND: ngb iteration 29: need to repeat for 54537100 particles. (took 0.135001 sec) SUBFIND: ngb iteration 30: need to repeat for 51163710 particles. (took 0.151947 sec) SUBFIND: ngb iteration 31: need to repeat for 47134856 particles. (took 0.163269 sec) SUBFIND: ngb iteration 32: need to repeat for 42681288 particles. (took 0.17339 sec) SUBFIND: ngb iteration 33: need to repeat for 38040146 particles. (took 0.179751 sec) SUBFIND: ngb iteration 34: need to repeat for 33232644 particles. (took 0.173596 sec) SUBFIND: ngb iteration 35: need to repeat for 28095795 particles. (took 0.159017 sec) SUBFIND: ngb iteration 36: need to repeat for 22595078 particles. (took 0.138489 sec) SUBFIND: ngb iteration 37: need to repeat for 16974966 particles. (took 0.115376 sec) SUBFIND: ngb iteration 38: need to repeat for 11680525 particles. (took 0.0919948 sec) SUBFIND: ngb iteration 39: need to repeat for 7184237 particles. (took 0.0697787 sec) SUBFIND: ngb iteration 40: need to repeat for 3845814 particles. (took 0.0482322 sec) SUBFIND: ngb iteration 41: need to repeat for 1737265 particles. (took 0.0301195 sec) SUBFIND: ngb iteration 42: need to repeat for 640429 particles. (took 0.0168553 sec) SUBFIND: ngb iteration 43: need to repeat for 184950 particles. (took 0.00868586 sec) SUBFIND: ngb iteration 44: need to repeat for 40557 particles. (took 0.00381662 sec) SUBFIND: ngb iteration 45: need to repeat for 6413 particles. (took 0.00150821 sec) SUBFIND: ngb iteration 46: need to repeat for 707 particles. (took 0.000555027 sec) SUBFIND: ngb iteration 47: need to repeat for 46 particles. (took 0.000333928 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 6.13297 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828915 particles, for threshold size factor 0.6) SUBFIND: The other 2399431 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00485779 sec SUBFIND: particle balance=1.1119 SUBFIND: subfind_exchange() took 0.235283 sec SUBFIND: particle balance for processing=1.00067 SUBFIND: subdomain decomposition took 0.0514537 sec SUBFIND: serial subfind subdomain decomposition took 0.0508647 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2778 took 30.4284 sec SUBFIND: root-task=0: Serial processing of halo 0 took 30.5528 SUBFIND: Processing overall took (total time=30.9952 sec) SUBFIND: 0 out of 2627 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258161 ALLOCATE: Changing to MaxPartSph = 120806 SUBFIND: subfind_exchange() (for return to original CPU) took 0.261929 sec TREE: Full tree construction for all particles. (presently allocated=80.1762 MB) GRAVTREE: Tree construction done. took 0.794072 sec =91067.2 NTopnodes=37529 NTopleaves=32838 tree-build-scalability=0.588375 SUBFIND: SO iteration 1: need to repeat for 2399407 halo centers. (took 0.0228697 sec) SUBFIND: SO iteration 2: need to repeat for 2399407 halo centers. (took 0.0218621 sec) SUBFIND: SO iteration 3: need to repeat for 2399407 halo centers. (took 0.0211693 sec) SUBFIND: SO iteration 4: need to repeat for 2399407 halo centers. (took 0.02077 sec) SUBFIND: SO iteration 5: need to repeat for 2399407 halo centers. (took 0.0206595 sec) SUBFIND: SO iteration 6: need to repeat for 2399407 halo centers. (took 0.0206808 sec) SUBFIND: SO iteration 7: need to repeat for 2399407 halo centers. (took 0.0207445 sec) SUBFIND: SO iteration 8: need to repeat for 2399407 halo centers. (took 0.0211692 sec) SUBFIND: SO iteration 9: need to repeat for 2399407 halo centers. (took 0.0207997 sec) SUBFIND: SO iteration 10: need to repeat for 2399407 halo centers. (took 0.0207148 sec) SUBFIND: SO iteration 11: need to repeat for 2399407 halo centers. (took 0.0206437 sec) SUBFIND: SO iteration 12: need to repeat for 2399407 halo centers. (took 0.0211553 sec) SUBFIND: SO iteration 13: need to repeat for 2399407 halo centers. (took 0.0206436 sec) SUBFIND: SO iteration 14: need to repeat for 2399407 halo centers. (took 0.0207683 sec) SUBFIND: SO iteration 15: need to repeat for 2399407 halo centers. (took 0.0205995 sec) SUBFIND: SO iteration 16: need to repeat for 216196 halo centers. (took 0.0202082 sec) SUBFIND: SO iteration 17: need to repeat for 1251 halo centers. (took 0.0075301 sec) SUBFIND: SO iteration 1: need to repeat for 2399407 halo centers. (took 0.0214782 sec) SUBFIND: SO iteration 2: need to repeat for 2399407 halo centers. (took 0.0212017 sec) SUBFIND: SO iteration 3: need to repeat for 2399407 halo centers. (took 0.0214823 sec) SUBFIND: SO iteration 4: need to repeat for 2399407 halo centers. (took 0.0220649 sec) SUBFIND: SO iteration 5: need to repeat for 2399407 halo centers. (took 0.0232298 sec) SUBFIND: SO iteration 6: need to repeat for 2399407 halo centers. (took 0.0218952 sec) SUBFIND: SO iteration 7: need to repeat for 2399407 halo centers. (took 0.0213848 sec) SUBFIND: SO iteration 8: need to repeat for 2399407 halo centers. (took 0.0216469 sec) SUBFIND: SO iteration 9: need to repeat for 2399407 halo centers. (took 0.02093 sec) SUBFIND: SO iteration 10: need to repeat for 2399407 halo centers. (took 0.0206367 sec) SUBFIND: SO iteration 11: need to repeat for 2399407 halo centers. (took 0.0208014 sec) SUBFIND: SO iteration 12: need to repeat for 2399407 halo centers. (took 0.020703 sec) SUBFIND: SO iteration 13: need to repeat for 2399407 halo centers. (took 0.0207763 sec) SUBFIND: SO iteration 14: need to repeat for 2399407 halo centers. (took 0.0206568 sec) SUBFIND: SO iteration 15: need to repeat for 2399407 halo centers. (took 0.0206397 sec) SUBFIND: SO iteration 16: need to repeat for 129329 halo centers. (took 0.0201918 sec) SUBFIND: SO iteration 17: need to repeat for 799 halo centers. (took 0.00563732 sec) SUBFIND: SO iteration 1: need to repeat for 2399407 halo centers. (took 0.0206574 sec) SUBFIND: SO iteration 2: need to repeat for 2399407 halo centers. (took 0.0204075 sec) SUBFIND: SO iteration 3: need to repeat for 2399407 halo centers. (took 0.0206625 sec) SUBFIND: SO iteration 4: need to repeat for 2399407 halo centers. (took 0.0212586 sec) SUBFIND: SO iteration 5: need to repeat for 2399407 halo centers. (took 0.0206001 sec) SUBFIND: SO iteration 6: need to repeat for 2399407 halo centers. (took 0.0206327 sec) SUBFIND: SO iteration 7: need to repeat for 2399407 halo centers. (took 0.0205993 sec) SUBFIND: SO iteration 8: need to repeat for 2399407 halo centers. (took 0.0207033 sec) SUBFIND: SO iteration 9: need to repeat for 2399407 halo centers. (took 0.0205875 sec) SUBFIND: SO iteration 10: need to repeat for 2399407 halo centers. (took 0.02059 sec) SUBFIND: SO iteration 11: need to repeat for 2399407 halo centers. (took 0.0206472 sec) SUBFIND: SO iteration 12: need to repeat for 2399407 halo centers. (took 0.0206445 sec) SUBFIND: SO iteration 13: need to repeat for 2399407 halo centers. (took 0.0206368 sec) SUBFIND: SO iteration 14: need to repeat for 2399407 halo centers. (took 0.020815 sec) SUBFIND: SO iteration 15: need to repeat for 2399407 halo centers. (took 0.0213379 sec) SUBFIND: SO iteration 16: need to repeat for 221617 halo centers. (took 0.0210295 sec) SUBFIND: SO iteration 17: need to repeat for 1269 halo centers. (took 0.00758166 sec) SUBFIND: SO iteration 1: need to repeat for 2399407 halo centers. (took 0.0211654 sec) SUBFIND: SO iteration 2: need to repeat for 2399407 halo centers. (took 0.0206233 sec) SUBFIND: SO iteration 3: need to repeat for 2399407 halo centers. (took 0.0201166 sec) SUBFIND: SO iteration 4: need to repeat for 2399407 halo centers. (took 0.0209489 sec) SUBFIND: SO iteration 5: need to repeat for 2399407 halo centers. (took 0.0203124 sec) SUBFIND: SO iteration 6: need to repeat for 2399407 halo centers. (took 0.0202737 sec) SUBFIND: SO iteration 7: need to repeat for 2399407 halo centers. (took 0.0202813 sec) SUBFIND: SO iteration 8: need to repeat for 2399407 halo centers. (took 0.0206569 sec) SUBFIND: SO iteration 9: need to repeat for 2399407 halo centers. (took 0.0205055 sec) SUBFIND: SO iteration 10: need to repeat for 2399407 halo centers. (took 0.0206453 sec) SUBFIND: SO iteration 11: need to repeat for 2399407 halo centers. (took 0.020335 sec) SUBFIND: SO iteration 12: need to repeat for 2399407 halo centers. (took 0.0203535 sec) SUBFIND: SO iteration 13: need to repeat for 2399407 halo centers. (took 0.0203625 sec) SUBFIND: SO iteration 14: need to repeat for 2399407 halo centers. (took 0.020363 sec) SUBFIND: SO iteration 15: need to repeat for 2399407 halo centers. (took 0.0202647 sec) SUBFIND: SO iteration 16: need to repeat for 2037687 halo centers. (took 0.0204311 sec) SUBFIND: SO iteration 17: need to repeat for 197327 halo centers. (took 0.0182636 sec) SUBFIND: SO iteration 18: need to repeat for 20276 halo centers. (took 0.0070798 sec) SUBFIND: determining spherical overdensity masses took 1.38657 sec SUBFIND: assembled and ordered groups and subhalos (took 0.266588 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 5.61075 sec, total size 897.538 MB, corresponds to effective I/O rate of 159.968 MB/sec SUBFIND: Subgroup catalogues saved. took = 5.61213 sec SUBFIND: Finished with SUBFIND. (total time=45.9504 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2402024 SUBFIND: Largest subhalo has 112 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133827532 FOF: preparing output order of particles took 0.980707 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 9.03203 sec, total size 5311.35 MB, corresponds to effective I/O rate of 588.057 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 194 (rank 194 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 253 (rank 253 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 262 (rank 262 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 264 (rank 264 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 252 (rank 252 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 275 (rank 275 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.