TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186478.98 Mb (on task= 621), Smallest = 186396.21 Mb (on task= 432), Average = 186427.53 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5119.12 Mb (on task= 432), Smallest = 5036.36 Mb (on task= 621), Average = 5087.80 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5119.12 Mb (on task= 432), Smallest = 5036.36 Mb (on task= 621), Average = 5087.80 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 16), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c106-162.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 16.2867 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 62889181 (tot= 62889181) masstab= 0 READIC: Type 1: 70938367 (tot= 70938367) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 1388 (tot= 1388) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.66477 sec, total size 6366.11 MB, corresponds to effective I/O rate of 1364.72 MB/sec READIC: Total number of particles : 133828936 INIT: Testing ID uniqueness... INIT: success. took=0.0602107 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=32628, determination of top-level tree involved 6 iterations and took 0.380794 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=180 for nextra=80, reaching maximum imbalance of 1.11683|1.11683 DOMAIN: combining multiple-domains took 0.0156872 sec DOMAIN: exchange of 70939755 particles DOMAIN: particle exchange done. (took 0.213864 sec) DOMAIN: domain decomposition done. (took in total 0.616091 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0327247 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=86.1948 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0517507 sec =73590.6 NTopnodes=37289 NTopleaves=32628 FOF: Start linking particles (presently allocated=97.9732 MB) FOF: linking of small cells took 0.00076909 sec FOF: local links done (took 0.0726053 sec, avg-work=0.0634837, imbalance=1.12458). FOF: Marked=178184 out of the 70938367 primaries which are linked FOF: begin linking across processors (presently allocated=99.0012 MB) FOF: have done 16931 cross links (processed 178184, took 0.00398546 sec) FOF: have done 3536 cross links (processed 91131, took 0.00313852 sec) FOF: have done 563 cross links (processed 12952, took 0.00258284 sec) FOF: have done 88 cross links (processed 1985, took 0.00242621 sec) FOF: have done 12 cross links (processed 286, took 0.00232959 sec) FOF: have done 1 cross links (processed 43, took 0.00229295 sec) FOF: have done 0 cross links (processed 2, took 0.00228583 sec) FOF: Local groups found. FOF: primary group finding took = 0.0968971 sec FOF: Start finding nearest dm-particle (presently allocated=97.9732 MB) FOF: fof-nearest iteration 1: need to repeat for 61686107 particles. (took = 0.0461864 sec) FOF: fof-nearest iteration 2: need to repeat for 55791747 particles. (took = 0.0503687 sec) FOF: fof-nearest iteration 3: need to repeat for 39187809 particles. (took = 0.0543399 sec) FOF: fof-nearest iteration 4: need to repeat for 16855286 particles. (took = 0.0464935 sec) FOF: fof-nearest iteration 5: need to repeat for 2848092 particles. (took = 0.0251933 sec) FOF: fof-nearest iteration 6: need to repeat for 65536 particles. (took = 0.00701524 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.233767 sec FOF: compiling local group data and catalogue took = 0.013009 sec FOF: Total number of FOF groups with at least 32 particles: 2256072 FOF: Largest FOF group has 60 particles. FOF: Total number of particles in FOF groups: 133828913 FOF: group properties are now allocated.. (presently allocated=89.556 MB) FOF: computation of group properties took = 0.0065516 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.245197 sec FOF: Finished computing FoF groups. Complete work took 0.77242 sec (presently allocated=87.1287 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.2934 MB) GRAVTREE: Tree construction done. took 0.149954 sec =89710.5 NTopnodes=37289 NTopleaves=32628 tree-build-scalability=0.584822 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 123463794 particles. (took 0.415244 sec) SUBFIND: ngb iteration 2: need to repeat for 112703351 particles. (took 0.324736 sec) SUBFIND: ngb iteration 3: need to repeat for 103084521 particles. (took 0.264912 sec) SUBFIND: ngb iteration 4: need to repeat for 95544365 particles. (took 0.220996 sec) SUBFIND: ngb iteration 5: need to repeat for 89844580 particles. (took 0.192558 sec) SUBFIND: ngb iteration 6: need to repeat for 84983679 particles. (took 0.17858 sec) SUBFIND: ngb iteration 7: need to repeat for 79658931 particles. (took 0.166808 sec) SUBFIND: ngb iteration 8: need to repeat for 73742794 particles. (took 0.152815 sec) SUBFIND: ngb iteration 9: need to repeat for 68768979 particles. (took 0.13769 sec) SUBFIND: ngb iteration 10: need to repeat for 65650425 particles. (took 0.125676 sec) SUBFIND: ngb iteration 11: need to repeat for 64080389 particles. (took 0.120753 sec) SUBFIND: ngb iteration 12: need to repeat for 63389644 particles. (took 0.121242 sec) SUBFIND: ngb iteration 13: need to repeat for 63106128 particles. (took 0.123626 sec) SUBFIND: ngb iteration 14: need to repeat for 62985847 particles. (took 0.124345 sec) SUBFIND: ngb iteration 15: need to repeat for 62929814 particles. (took 0.121719 sec) SUBFIND: ngb iteration 16: need to repeat for 62891661 particles. (took 0.115744 sec) SUBFIND: ngb iteration 17: need to repeat for 62837343 particles. (took 0.107952 sec) SUBFIND: ngb iteration 18: need to repeat for 62750357 particles. (took 0.100145 sec) SUBFIND: ngb iteration 19: need to repeat for 62626748 particles. (took 0.0936023 sec) SUBFIND: ngb iteration 20: need to repeat for 62461200 particles. (took 0.0905564 sec) SUBFIND: ngb iteration 21: need to repeat for 62232247 particles. (took 0.0897375 sec) SUBFIND: ngb iteration 22: need to repeat for 61902724 particles. (took 0.0901849 sec) SUBFIND: ngb iteration 23: need to repeat for 61418499 particles. (took 0.0915106 sec) SUBFIND: ngb iteration 24: need to repeat for 60683624 particles. (took 0.0925022 sec) SUBFIND: ngb iteration 25: need to repeat for 59581810 particles. (took 0.0946916 sec) SUBFIND: ngb iteration 26: need to repeat for 57943691 particles. (took 0.0977574 sec) SUBFIND: ngb iteration 27: need to repeat for 55561794 particles. (took 0.101854 sec) SUBFIND: ngb iteration 28: need to repeat for 52155655 particles. (took 0.106951 sec) SUBFIND: ngb iteration 29: need to repeat for 47649664 particles. (took 0.113978 sec) SUBFIND: ngb iteration 30: need to repeat for 42076241 particles. (took 0.118598 sec) SUBFIND: ngb iteration 31: need to repeat for 35814342 particles. (took 0.122561 sec) SUBFIND: ngb iteration 32: need to repeat for 29557300 particles. (took 0.125234 sec) SUBFIND: ngb iteration 33: need to repeat for 23976279 particles. (took 0.120679 sec) SUBFIND: ngb iteration 34: need to repeat for 19249020 particles. (took 0.111075 sec) SUBFIND: ngb iteration 35: need to repeat for 15144472 particles. (took 0.0968169 sec) SUBFIND: ngb iteration 36: need to repeat for 11455168 particles. (took 0.0798521 sec) SUBFIND: ngb iteration 37: need to repeat for 8180708 particles. (took 0.063214 sec) SUBFIND: ngb iteration 38: need to repeat for 5405851 particles. (took 0.0484866 sec) SUBFIND: ngb iteration 39: need to repeat for 3230572 particles. (took 0.0358122 sec) SUBFIND: ngb iteration 40: need to repeat for 1701358 particles. (took 0.0245402 sec) SUBFIND: ngb iteration 41: need to repeat for 769354 particles. (took 0.0157161 sec) SUBFIND: ngb iteration 42: need to repeat for 289684 particles. (took 0.00902114 sec) SUBFIND: ngb iteration 43: need to repeat for 88586 particles. (took 0.0048268 sec) SUBFIND: ngb iteration 44: need to repeat for 21164 particles. (took 0.00246297 sec) SUBFIND: ngb iteration 45: need to repeat for 3975 particles. (took 0.000981038 sec) SUBFIND: ngb iteration 46: need to repeat for 496 particles. (took 0.000565242 sec) SUBFIND: ngb iteration 47: need to repeat for 38 particles. (took 0.000559671 sec) SUBFIND: ngb iteration 48: need to repeat for 2 particles. (took 0.000286106 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 5.16404 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828936 particles, for threshold size factor 0.6) SUBFIND: The other 2256072 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00530742 sec SUBFIND: particle balance=1.11662 SUBFIND: subfind_exchange() took 0.23616 sec SUBFIND: particle balance for processing=1.00031 SUBFIND: subdomain decomposition took 0.0512727 sec SUBFIND: serial subfind subdomain decomposition took 0.0507814 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2612 took 26.7976 sec SUBFIND: root-task=0: Serial processing of halo 0 took 26.9218 SUBFIND: Processing overall took (total time=29.0046 sec) SUBFIND: 0 out of 2448 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258160 ALLOCATE: Changing to MaxPartSph = 121315 SUBFIND: subfind_exchange() (for return to original CPU) took 0.260904 sec TREE: Full tree construction for all particles. (presently allocated=80.0554 MB) GRAVTREE: Tree construction done. took 0.812152 sec =89710.5 NTopnodes=37289 NTopleaves=32628 tree-build-scalability=0.584822 SUBFIND: SO iteration 1: need to repeat for 2256066 halo centers. (took 0.0225034 sec) SUBFIND: SO iteration 2: need to repeat for 2256066 halo centers. (took 0.0208344 sec) SUBFIND: SO iteration 3: need to repeat for 2256066 halo centers. (took 0.0216897 sec) SUBFIND: SO iteration 4: need to repeat for 2256066 halo centers. (took 0.0208744 sec) SUBFIND: SO iteration 5: need to repeat for 2256066 halo centers. (took 0.0203288 sec) SUBFIND: SO iteration 6: need to repeat for 2256066 halo centers. (took 0.0201072 sec) SUBFIND: SO iteration 7: need to repeat for 2256066 halo centers. (took 0.0200306 sec) SUBFIND: SO iteration 8: need to repeat for 2256066 halo centers. (took 0.0200238 sec) SUBFIND: SO iteration 9: need to repeat for 2256066 halo centers. (took 0.0200569 sec) SUBFIND: SO iteration 10: need to repeat for 2256066 halo centers. (took 0.0201363 sec) SUBFIND: SO iteration 11: need to repeat for 2256066 halo centers. (took 0.0200809 sec) SUBFIND: SO iteration 12: need to repeat for 2256066 halo centers. (took 0.0208023 sec) SUBFIND: SO iteration 13: need to repeat for 2256066 halo centers. (took 0.0200741 sec) SUBFIND: SO iteration 14: need to repeat for 2256066 halo centers. (took 0.0202923 sec) SUBFIND: SO iteration 15: need to repeat for 2256066 halo centers. (took 0.0200227 sec) SUBFIND: SO iteration 16: need to repeat for 190993 halo centers. (took 0.0201039 sec) SUBFIND: SO iteration 17: need to repeat for 876 halo centers. (took 0.00781417 sec) SUBFIND: SO iteration 1: need to repeat for 2256066 halo centers. (took 0.0201403 sec) SUBFIND: SO iteration 2: need to repeat for 2256066 halo centers. (took 0.0207237 sec) SUBFIND: SO iteration 3: need to repeat for 2256066 halo centers. (took 0.0205397 sec) SUBFIND: SO iteration 4: need to repeat for 2256066 halo centers. (took 0.0204029 sec) SUBFIND: SO iteration 5: need to repeat for 2256066 halo centers. (took 0.0203961 sec) SUBFIND: SO iteration 6: need to repeat for 2256066 halo centers. (took 0.0202432 sec) SUBFIND: SO iteration 7: need to repeat for 2256066 halo centers. (took 0.0200887 sec) SUBFIND: SO iteration 8: need to repeat for 2256066 halo centers. (took 0.0201727 sec) SUBFIND: SO iteration 9: need to repeat for 2256066 halo centers. (took 0.020073 sec) SUBFIND: SO iteration 10: need to repeat for 2256066 halo centers. (took 0.0200223 sec) SUBFIND: SO iteration 11: need to repeat for 2256066 halo centers. (took 0.0200561 sec) SUBFIND: SO iteration 12: need to repeat for 2256066 halo centers. (took 0.0203504 sec) SUBFIND: SO iteration 13: need to repeat for 2256066 halo centers. (took 0.020234 sec) SUBFIND: SO iteration 14: need to repeat for 2256066 halo centers. (took 0.0201285 sec) SUBFIND: SO iteration 15: need to repeat for 2256066 halo centers. (took 0.0201641 sec) SUBFIND: SO iteration 16: need to repeat for 111714 halo centers. (took 0.0196099 sec) SUBFIND: SO iteration 17: need to repeat for 537 halo centers. (took 0.00634408 sec) SUBFIND: SO iteration 1: need to repeat for 2256066 halo centers. (took 0.0201638 sec) SUBFIND: SO iteration 2: need to repeat for 2256066 halo centers. (took 0.0199398 sec) SUBFIND: SO iteration 3: need to repeat for 2256066 halo centers. (took 0.0200788 sec) SUBFIND: SO iteration 4: need to repeat for 2256066 halo centers. (took 0.0201144 sec) SUBFIND: SO iteration 5: need to repeat for 2256066 halo centers. (took 0.0200543 sec) SUBFIND: SO iteration 6: need to repeat for 2256066 halo centers. (took 0.0200712 sec) SUBFIND: SO iteration 7: need to repeat for 2256066 halo centers. (took 0.0200732 sec) SUBFIND: SO iteration 8: need to repeat for 2256066 halo centers. (took 0.0200637 sec) SUBFIND: SO iteration 9: need to repeat for 2256066 halo centers. (took 0.0200543 sec) SUBFIND: SO iteration 10: need to repeat for 2256066 halo centers. (took 0.0200623 sec) SUBFIND: SO iteration 11: need to repeat for 2256066 halo centers. (took 0.0200657 sec) SUBFIND: SO iteration 12: need to repeat for 2256066 halo centers. (took 0.0202065 sec) SUBFIND: SO iteration 13: need to repeat for 2256066 halo centers. (took 0.0200524 sec) SUBFIND: SO iteration 14: need to repeat for 2256066 halo centers. (took 0.0201381 sec) SUBFIND: SO iteration 15: need to repeat for 2256066 halo centers. (took 0.0202503 sec) SUBFIND: SO iteration 16: need to repeat for 192702 halo centers. (took 0.0197565 sec) SUBFIND: SO iteration 17: need to repeat for 885 halo centers. (took 0.00726157 sec) SUBFIND: SO iteration 1: need to repeat for 2256066 halo centers. (took 0.0201765 sec) SUBFIND: SO iteration 2: need to repeat for 2256066 halo centers. (took 0.0200829 sec) SUBFIND: SO iteration 3: need to repeat for 2256066 halo centers. (took 0.0198322 sec) SUBFIND: SO iteration 4: need to repeat for 2256066 halo centers. (took 0.0197373 sec) SUBFIND: SO iteration 5: need to repeat for 2256066 halo centers. (took 0.0197884 sec) SUBFIND: SO iteration 6: need to repeat for 2256066 halo centers. (took 0.0199344 sec) SUBFIND: SO iteration 7: need to repeat for 2256066 halo centers. (took 0.0197406 sec) SUBFIND: SO iteration 8: need to repeat for 2256066 halo centers. (took 0.0197636 sec) SUBFIND: SO iteration 9: need to repeat for 2256066 halo centers. (took 0.0200236 sec) SUBFIND: SO iteration 10: need to repeat for 2256066 halo centers. (took 0.0197333 sec) SUBFIND: SO iteration 11: need to repeat for 2256066 halo centers. (took 0.0197105 sec) SUBFIND: SO iteration 12: need to repeat for 2256066 halo centers. (took 0.019736 sec) SUBFIND: SO iteration 13: need to repeat for 2256066 halo centers. (took 0.0197195 sec) SUBFIND: SO iteration 14: need to repeat for 2256066 halo centers. (took 0.0197095 sec) SUBFIND: SO iteration 15: need to repeat for 2256066 halo centers. (took 0.0199221 sec) SUBFIND: SO iteration 16: need to repeat for 1885445 halo centers. (took 0.0199023 sec) SUBFIND: SO iteration 17: need to repeat for 186191 halo centers. (took 0.0179367 sec) SUBFIND: SO iteration 18: need to repeat for 15699 halo centers. (took 0.007005 sec) SUBFIND: determining spherical overdensity masses took 1.34167 sec SUBFIND: assembled and ordered groups and subhalos (took 0.264529 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 5.60637 sec, total size 843.91 MB, corresponds to effective I/O rate of 150.527 MB/sec SUBFIND: Subgroup catalogues saved. took = 5.60772 sec SUBFIND: Finished with SUBFIND. (total time=42.8898 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2258496 SUBFIND: Largest subhalo has 60 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133828468 FOF: preparing output order of particles took 0.946836 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 7.62703 sec, total size 5314.36 MB, corresponds to effective I/O rate of 696.78 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 740 (rank 740 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 754 (rank 754 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 739 (rank 739 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.