TACC: Starting up job 4244607 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186469.96 Mb (on task= 621), Smallest = 186405.07 Mb (on task= 0), Average = 186425.64 Mb Total Mem: Largest = 191515.34 Mb (on task= 27), Smallest = 191515.20 Mb (on task= 0), Average = 191515.33 Mb Committed_AS: Largest = 5110.13 Mb (on task= 0), Smallest = 5045.38 Mb (on task= 621), Average = 5089.69 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5110.13 Mb (on task= 0), Smallest = 5045.38 Mb (on task= 621), Average = 5089.69 Mb avail /dev/shm: Largest = 95321.44 Mb (on task= 27), Smallest = 95321.34 Mb (on task= 22), Average = 95321.42 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c102-131.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.9346 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_086.hdf5' contains: READIC: Type 0 (gas): 63649767 (tot= 63649767) masstab= 0 READIC: Type 1: 70175174 (tot= 70175174) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 3978 (tot= 3978) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_086.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.24355 sec, total size 6369.01 MB, corresponds to effective I/O rate of 1500.87 MB/sec READIC: Total number of particles : 133828919 INIT: Testing ID uniqueness... INIT: success. took=0.0666579 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=31879, determination of top-level tree involved 6 iterations and took 0.377867 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=175 for nextra=125, reaching maximum imbalance of 1.11202|1.11203 DOMAIN: combining multiple-domains took 0.0156814 sec DOMAIN: exchange of 70179152 particles DOMAIN: particle exchange done. (took 0.218722 sec) DOMAIN: domain decomposition done. (took in total 0.617829 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0335098 sec. INIT: Converting u -> entropy All.cf_a3inv=729 FOF: Begin to compute FoF group catalogue... (presently allocated=86.4676 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0501316 sec =69909.1 NTopnodes=36433 NTopleaves=31879 FOF: Start linking particles (presently allocated=98.2938 MB) FOF: linking of small cells took 0.000980111 sec FOF: local links done (took 0.0730477 sec, avg-work=0.0644284, imbalance=1.12204). FOF: Marked=182994 out of the 70175174 primaries which are linked FOF: begin linking across processors (presently allocated=99.3254 MB) FOF: have done 16088 cross links (processed 182994, took 0.00384728 sec) FOF: have done 3531 cross links (processed 92532, took 0.00308216 sec) FOF: have done 583 cross links (processed 13429, took 0.00258175 sec) FOF: have done 116 cross links (processed 2267, took 0.00237956 sec) FOF: have done 13 cross links (processed 416, took 0.00238909 sec) FOF: have done 2 cross links (processed 42, took 0.00234901 sec) FOF: have done 0 cross links (processed 7, took 0.00230042 sec) FOF: Local groups found. FOF: primary group finding took = 0.097442 sec FOF: Start finding nearest dm-particle (presently allocated=98.2938 MB) FOF: fof-nearest iteration 1: need to repeat for 62275382 particles. (took = 0.0470405 sec) FOF: fof-nearest iteration 2: need to repeat for 55601280 particles. (took = 0.0515289 sec) FOF: fof-nearest iteration 3: need to repeat for 37502010 particles. (took = 0.0556781 sec) FOF: fof-nearest iteration 4: need to repeat for 15043730 particles. (took = 0.0459618 sec) FOF: fof-nearest iteration 5: need to repeat for 2398792 particles. (took = 0.0236826 sec) FOF: fof-nearest iteration 6: need to repeat for 54878 particles. (took = 0.0063986 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.234449 sec FOF: compiling local group data and catalogue took = 0.012911 sec FOF: Total number of FOF groups with at least 32 particles: 1875634 FOF: Largest FOF group has 144 particles. FOF: Total number of particles in FOF groups: 133828913 FOF: group properties are now allocated.. (presently allocated=89.7202 MB) FOF: computation of group properties took = 0.00621743 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.247178 sec FOF: Finished computing FoF groups. Complete work took 0.771961 sec (presently allocated=87.259 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.4017 MB) GRAVTREE: Tree construction done. took 0.152193 sec =85848.1 NTopnodes=36433 NTopleaves=31879 tree-build-scalability=0.576102 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133305422 particles. (took 0.421174 sec) SUBFIND: ngb iteration 2: need to repeat for 132612702 particles. (took 0.354775 sec) SUBFIND: ngb iteration 3: need to repeat for 131720093 particles. (took 0.319572 sec) SUBFIND: ngb iteration 4: need to repeat for 130486491 particles. (took 0.296699 sec) SUBFIND: ngb iteration 5: need to repeat for 128503656 particles. (took 0.290001 sec) SUBFIND: ngb iteration 6: need to repeat for 124903965 particles. (took 0.289946 sec) SUBFIND: ngb iteration 7: need to repeat for 118173720 particles. (took 0.288208 sec) SUBFIND: ngb iteration 8: need to repeat for 106952698 particles. (took 0.275254 sec) SUBFIND: ngb iteration 9: need to repeat for 92873516 particles. (took 0.249254 sec) SUBFIND: ngb iteration 10: need to repeat for 80702121 particles. (took 0.214408 sec) SUBFIND: ngb iteration 11: need to repeat for 72835798 particles. (took 0.182808 sec) SUBFIND: ngb iteration 12: need to repeat for 68489567 particles. (took 0.163211 sec) SUBFIND: ngb iteration 13: need to repeat for 66225931 particles. (took 0.153453 sec) SUBFIND: ngb iteration 14: need to repeat for 65038337 particles. (took 0.146132 sec) SUBFIND: ngb iteration 15: need to repeat for 64384198 particles. (took 0.139637 sec) SUBFIND: ngb iteration 16: need to repeat for 63986598 particles. (took 0.131281 sec) SUBFIND: ngb iteration 17: need to repeat for 63719769 particles. (took 0.122094 sec) SUBFIND: ngb iteration 18: need to repeat for 63521163 particles. (took 0.11279 sec) SUBFIND: ngb iteration 19: need to repeat for 63356004 particles. (took 0.105607 sec) SUBFIND: ngb iteration 20: need to repeat for 63190868 particles. (took 0.10153 sec) SUBFIND: ngb iteration 21: need to repeat for 62994141 particles. (took 0.100164 sec) SUBFIND: ngb iteration 22: need to repeat for 62743528 particles. (took 0.100652 sec) SUBFIND: ngb iteration 23: need to repeat for 62410049 particles. (took 0.101922 sec) SUBFIND: ngb iteration 24: need to repeat for 61965676 particles. (took 0.103992 sec) SUBFIND: ngb iteration 25: need to repeat for 61358994 particles. (took 0.106653 sec) SUBFIND: ngb iteration 26: need to repeat for 60532490 particles. (took 0.110737 sec) SUBFIND: ngb iteration 27: need to repeat for 59423328 particles. (took 0.116247 sec) SUBFIND: ngb iteration 28: need to repeat for 57948793 particles. (took 0.124704 sec) SUBFIND: ngb iteration 29: need to repeat for 56037720 particles. (took 0.134807 sec) SUBFIND: ngb iteration 30: need to repeat for 53617809 particles. (took 0.145598 sec) SUBFIND: ngb iteration 31: need to repeat for 50619723 particles. (took 0.156462 sec) SUBFIND: ngb iteration 32: need to repeat for 46987946 particles. (took 0.163878 sec) SUBFIND: ngb iteration 33: need to repeat for 42670575 particles. (took 0.166635 sec) SUBFIND: ngb iteration 34: need to repeat for 37652061 particles. (took 0.164571 sec) SUBFIND: ngb iteration 35: need to repeat for 32018775 particles. (took 0.154911 sec) SUBFIND: ngb iteration 36: need to repeat for 25983713 particles. (took 0.139967 sec) SUBFIND: ngb iteration 37: need to repeat for 19884330 particles. (took 0.119088 sec) SUBFIND: ngb iteration 38: need to repeat for 14146149 particles. (took 0.0988716 sec) SUBFIND: ngb iteration 39: need to repeat for 9203789 particles. (took 0.0776359 sec) SUBFIND: ngb iteration 40: need to repeat for 5362259 particles. (took 0.057805 sec) SUBFIND: ngb iteration 41: need to repeat for 2736355 particles. (took 0.0388054 sec) SUBFIND: ngb iteration 42: need to repeat for 1190266 particles. (took 0.0237841 sec) SUBFIND: ngb iteration 43: need to repeat for 425440 particles. (took 0.012686 sec) SUBFIND: ngb iteration 44: need to repeat for 122595 particles. (took 0.00615231 sec) SUBFIND: ngb iteration 45: need to repeat for 26989 particles. (took 0.00271153 sec) SUBFIND: ngb iteration 46: need to repeat for 4262 particles. (took 0.00116336 sec) SUBFIND: ngb iteration 47: need to repeat for 355 particles. (took 0.000457508 sec) SUBFIND: ngb iteration 48: need to repeat for 9 particles. (took 0.000311896 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 6.8931 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 133828919 particles, for threshold size factor 0.6) SUBFIND: The other 1875634 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00440591 sec SUBFIND: particle balance=1.11182 SUBFIND: subfind_exchange() took 0.237337 sec SUBFIND: particle balance for processing=1.00053 SUBFIND: subdomain decomposition took 0.0508081 sec SUBFIND: serial subfind subdomain decomposition took 0.0506465 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2171 took 22.4829 sec SUBFIND: root-task=0: Serial processing of halo 0 took 22.6058 SUBFIND: Processing overall took (total time=23.9819 sec) SUBFIND: 0 out of 6379 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258160 ALLOCATE: Changing to MaxPartSph = 122781 SUBFIND: subfind_exchange() (for return to original CPU) took 0.264304 sec TREE: Full tree construction for all particles. (presently allocated=80.4449 MB) GRAVTREE: Tree construction done. took 0.752735 sec =85848.1 NTopnodes=36433 NTopleaves=31879 tree-build-scalability=0.576102 SUBFIND: SO iteration 1: need to repeat for 1875628 halo centers. (took 0.0209855 sec) SUBFIND: SO iteration 2: need to repeat for 1875628 halo centers. (took 0.020772 sec) SUBFIND: SO iteration 3: need to repeat for 1875628 halo centers. (took 0.0193908 sec) SUBFIND: SO iteration 4: need to repeat for 1875628 halo centers. (took 0.0192393 sec) SUBFIND: SO iteration 5: need to repeat for 1875628 halo centers. (took 0.0190947 sec) SUBFIND: SO iteration 6: need to repeat for 1875628 halo centers. (took 0.0190486 sec) SUBFIND: SO iteration 7: need to repeat for 1875628 halo centers. (took 0.0193781 sec) SUBFIND: SO iteration 8: need to repeat for 1875628 halo centers. (took 0.0189623 sec) SUBFIND: SO iteration 9: need to repeat for 1875628 halo centers. (took 0.0193313 sec) SUBFIND: SO iteration 10: need to repeat for 1875628 halo centers. (took 0.019032 sec) SUBFIND: SO iteration 11: need to repeat for 1875628 halo centers. (took 0.0190364 sec) SUBFIND: SO iteration 12: need to repeat for 1875628 halo centers. (took 0.0189681 sec) SUBFIND: SO iteration 13: need to repeat for 1875628 halo centers. (took 0.0190347 sec) SUBFIND: SO iteration 14: need to repeat for 1875628 halo centers. (took 0.0190297 sec) SUBFIND: SO iteration 15: need to repeat for 1875628 halo centers. (took 0.0193339 sec) SUBFIND: SO iteration 16: need to repeat for 124910 halo centers. (took 0.0186119 sec) SUBFIND: SO iteration 17: need to repeat for 817 halo centers. (took 0.00570978 sec) SUBFIND: SO iteration 1: need to repeat for 1875628 halo centers. (took 0.0191903 sec) SUBFIND: SO iteration 2: need to repeat for 1875628 halo centers. (took 0.0195277 sec) SUBFIND: SO iteration 3: need to repeat for 1875628 halo centers. (took 0.0195325 sec) SUBFIND: SO iteration 4: need to repeat for 1875628 halo centers. (took 0.0192283 sec) SUBFIND: SO iteration 5: need to repeat for 1875628 halo centers. (took 0.0191849 sec) SUBFIND: SO iteration 6: need to repeat for 1875628 halo centers. (took 0.0191182 sec) SUBFIND: SO iteration 7: need to repeat for 1875628 halo centers. (took 0.0192022 sec) SUBFIND: SO iteration 8: need to repeat for 1875628 halo centers. (took 0.0190441 sec) SUBFIND: SO iteration 9: need to repeat for 1875628 halo centers. (took 0.0191247 sec) SUBFIND: SO iteration 10: need to repeat for 1875628 halo centers. (took 0.0191031 sec) SUBFIND: SO iteration 11: need to repeat for 1875628 halo centers. (took 0.0190482 sec) SUBFIND: SO iteration 12: need to repeat for 1875628 halo centers. (took 0.0190017 sec) SUBFIND: SO iteration 13: need to repeat for 1875628 halo centers. (took 0.0190569 sec) SUBFIND: SO iteration 14: need to repeat for 1875628 halo centers. (took 0.01904 sec) SUBFIND: SO iteration 15: need to repeat for 1875628 halo centers. (took 0.0191637 sec) SUBFIND: SO iteration 16: need to repeat for 71373 halo centers. (took 0.0185937 sec) SUBFIND: SO iteration 17: need to repeat for 186 halo centers. (took 0.00395974 sec) SUBFIND: SO iteration 1: need to repeat for 1875628 halo centers. (took 0.019038 sec) SUBFIND: SO iteration 2: need to repeat for 1875628 halo centers. (took 0.0188502 sec) SUBFIND: SO iteration 3: need to repeat for 1875628 halo centers. (took 0.0191349 sec) SUBFIND: SO iteration 4: need to repeat for 1875628 halo centers. (took 0.0196396 sec) SUBFIND: SO iteration 5: need to repeat for 1875628 halo centers. (took 0.0208041 sec) SUBFIND: SO iteration 6: need to repeat for 1875628 halo centers. (took 0.018954 sec) SUBFIND: SO iteration 7: need to repeat for 1875628 halo centers. (took 0.0189696 sec) SUBFIND: SO iteration 8: need to repeat for 1875628 halo centers. (took 0.0190412 sec) SUBFIND: SO iteration 9: need to repeat for 1875628 halo centers. (took 0.0190629 sec) SUBFIND: SO iteration 10: need to repeat for 1875628 halo centers. (took 0.0189874 sec) SUBFIND: SO iteration 11: need to repeat for 1875628 halo centers. (took 0.0189316 sec) SUBFIND: SO iteration 12: need to repeat for 1875628 halo centers. (took 0.01896 sec) SUBFIND: SO iteration 13: need to repeat for 1875628 halo centers. (took 0.0191569 sec) SUBFIND: SO iteration 14: need to repeat for 1875628 halo centers. (took 0.0189524 sec) SUBFIND: SO iteration 15: need to repeat for 1875628 halo centers. (took 0.0190795 sec) SUBFIND: SO iteration 16: need to repeat for 127435 halo centers. (took 0.0186103 sec) SUBFIND: SO iteration 17: need to repeat for 838 halo centers. (took 0.00572448 sec) SUBFIND: SO iteration 1: need to repeat for 1875628 halo centers. (took 0.0189654 sec) SUBFIND: SO iteration 2: need to repeat for 1875628 halo centers. (took 0.0190173 sec) SUBFIND: SO iteration 3: need to repeat for 1875628 halo centers. (took 0.0186132 sec) SUBFIND: SO iteration 4: need to repeat for 1875628 halo centers. (took 0.019801 sec) SUBFIND: SO iteration 5: need to repeat for 1875628 halo centers. (took 0.0190496 sec) SUBFIND: SO iteration 6: need to repeat for 1875628 halo centers. (took 0.0189201 sec) SUBFIND: SO iteration 7: need to repeat for 1875628 halo centers. (took 0.0191455 sec) SUBFIND: SO iteration 8: need to repeat for 1875628 halo centers. (took 0.0196491 sec) SUBFIND: SO iteration 9: need to repeat for 1875628 halo centers. (took 0.019878 sec) SUBFIND: SO iteration 10: need to repeat for 1875628 halo centers. (took 0.0198303 sec) SUBFIND: SO iteration 11: need to repeat for 1875628 halo centers. (took 0.020563 sec) SUBFIND: SO iteration 12: need to repeat for 1875628 halo centers. (took 0.0199745 sec) SUBFIND: SO iteration 13: need to repeat for 1875628 halo centers. (took 0.020103 sec) SUBFIND: SO iteration 14: need to repeat for 1875628 halo centers. (took 0.0194709 sec) SUBFIND: SO iteration 15: need to repeat for 1875628 halo centers. (took 0.0206545 sec) SUBFIND: SO iteration 16: need to repeat for 1475052 halo centers. (took 0.019886 sec) SUBFIND: SO iteration 17: need to repeat for 111962 halo centers. (took 0.0169171 sec) SUBFIND: SO iteration 18: need to repeat for 12633 halo centers. (took 0.00562863 sec) SUBFIND: SO iteration 19: need to repeat for 1 halo centers. (took 0.00115801 sec) SUBFIND: determining spherical overdensity masses took 1.27819 sec SUBFIND: assembled and ordered groups and subhalos (took 0.256621 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_086' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 5.60304 sec, total size 702.497 MB, corresponds to effective I/O rate of 125.378 MB/sec SUBFIND: Subgroup catalogues saved. took = 5.60426 sec SUBFIND: Finished with SUBFIND. (total time=39.4679 sec) SUBFIND: Total number of subhalos with at least 20 particles: 1881989 SUBFIND: Largest subhalo has 121 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 133828436 FOF: preparing output order of particles took 0.946458 sec SNAPSHOT: writing snapshot file #86 @ time 0.111111 ... SNAPSHOT: writing snapshot file: 'output/snap_086' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_086.hdf5' to 'output/bak-snap_086.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.13119 sec, total size 5323.07 MB, corresponds to effective I/O rate of 654.648 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 379 (rank 379 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 522 (rank 522 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 589 (rank 589 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 365 (rank 365 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 596 (rank 596 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 615 (rank 615 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 595 (rank 595 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.