TACC: Starting up job 4244611 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186305.36 Mb (on task= 702), Smallest = 186178.74 Mb (on task= 0), Average = 186277.19 Mb Total Mem: Largest = 191386.89 Mb (on task= 54), Smallest = 191386.76 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5208.02 Mb (on task= 0), Smallest = 5081.54 Mb (on task= 702), Average = 5109.70 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5208.02 Mb (on task= 0), Smallest = 5081.54 Mb (on task= 702), Average = 5109.70 Mb avail /dev/shm: Largest = 95257.22 Mb (on task= 81), Smallest = 95257.12 Mb (on task= 16), Average = 95257.20 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-001.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 17.266 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_066.hdf5' contains: READIC: Type 0 (gas): 63817185 (tot= 63817185) masstab= 0 READIC: Type 1: 70317343 (tot= 70317343) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 794 (tot= 794) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_066.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.73077 sec, total size 6383.67 MB, corresponds to effective I/O rate of 1349.39 MB/sec READIC: Total number of particles : 134135322 INIT: Testing ID uniqueness... INIT: success. took=0.0601293 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: Increasing TopNodeAllocFactor=4.09487 new value=5.32333 DOMAIN: NTopleaves=32271, determination of top-level tree involved 6 iterations and took 0.383055 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=196, reaching maximum imbalance of 1.1197|1.11973 DOMAIN: combining multiple-domains took 0.0155329 sec DOMAIN: exchange of 70318137 particles DOMAIN: particle exchange done. (took 0.226468 sec) DOMAIN: domain decomposition done. (took in total 0.630856 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0348208 sec. INIT: Converting u -> entropy All.cf_a3inv=1000 FOF: Begin to compute FoF group catalogue... (presently allocated=86.679 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0535637 sec =76225.9 NTopnodes=36881 NTopleaves=32271 FOF: Start linking particles (presently allocated=98.7108 MB) FOF: linking of small cells took 0.00103624 sec FOF: local links done (took 0.069795 sec, avg-work=0.0608641, imbalance=1.13364). FOF: Marked=170431 out of the 70317343 primaries which are linked FOF: begin linking across processors (presently allocated=99.7883 MB) FOF: have done 17632 cross links (processed 170431, took 0.00406325 sec) FOF: have done 3477 cross links (processed 86991, took 0.00329046 sec) FOF: have done 574 cross links (processed 11871, took 0.00279357 sec) FOF: have done 76 cross links (processed 1782, took 0.00246219 sec) FOF: have done 8 cross links (processed 209, took 0.00235864 sec) FOF: have done 0 cross links (processed 32, took 0.00241794 sec) FOF: Local groups found. FOF: primary group finding took = 0.0930218 sec FOF: Start finding nearest dm-particle (presently allocated=98.7108 MB) FOF: fof-nearest iteration 1: need to repeat for 62656307 particles. (took = 0.046381 sec) FOF: fof-nearest iteration 2: need to repeat for 56790797 particles. (took = 0.0503183 sec) FOF: fof-nearest iteration 3: need to repeat for 39491202 particles. (took = 0.0536698 sec) FOF: fof-nearest iteration 4: need to repeat for 16858199 particles. (took = 0.0449805 sec) FOF: fof-nearest iteration 5: need to repeat for 3065650 particles. (took = 0.0241725 sec) FOF: fof-nearest iteration 6: need to repeat for 56366 particles. (took = 0.00710092 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.231007 sec FOF: compiling local group data and catalogue took = 0.0134683 sec FOF: Total number of FOF groups with at least 32 particles: 2776345 FOF: Largest FOF group has 98 particles. FOF: Total number of particles in FOF groups: 134134900 FOF: group properties are now allocated.. (presently allocated=90.4241 MB) FOF: computation of group properties took = 0.00739308 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.243168 sec FOF: Finished computing FoF groups. Complete work took 0.784742 sec (presently allocated=87.8754 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=93.0661 MB) GRAVTREE: Tree construction done. took 0.216658 sec =93402.8 NTopnodes=36881 NTopleaves=32271 tree-build-scalability=0.605597 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 133841653 particles. (took 0.429606 sec) SUBFIND: ngb iteration 2: need to repeat for 133334518 particles. (took 0.371956 sec) SUBFIND: ngb iteration 3: need to repeat for 132502861 particles. (took 0.34918 sec) SUBFIND: ngb iteration 4: need to repeat for 131075525 particles. (took 0.327648 sec) SUBFIND: ngb iteration 5: need to repeat for 128452460 particles. (took 0.318883 sec) SUBFIND: ngb iteration 6: need to repeat for 123408889 particles. (took 0.314476 sec) SUBFIND: ngb iteration 7: need to repeat for 113919645 particles. (took 0.303457 sec) SUBFIND: ngb iteration 8: need to repeat for 99032676 particles. (took 0.278245 sec) SUBFIND: ngb iteration 9: need to repeat for 83041125 particles. (took 0.232611 sec) SUBFIND: ngb iteration 10: need to repeat for 72121750 particles. (took 0.178213 sec) SUBFIND: ngb iteration 11: need to repeat for 66834867 particles. (took 0.138837 sec) SUBFIND: ngb iteration 12: need to repeat for 64797057 particles. (took 0.120728 sec) SUBFIND: ngb iteration 13: need to repeat for 64118558 particles. (took 0.115539 sec) SUBFIND: ngb iteration 14: need to repeat for 63910386 particles. (took 0.113368 sec) SUBFIND: ngb iteration 15: need to repeat for 63847111 particles. (took 0.110273 sec) SUBFIND: ngb iteration 16: need to repeat for 63826308 particles. (took 0.104487 sec) SUBFIND: ngb iteration 17: need to repeat for 63818816 particles. (took 0.097209 sec) SUBFIND: ngb iteration 18: need to repeat for 63815041 particles. (took 0.0902982 sec) SUBFIND: ngb iteration 19: need to repeat for 63810894 particles. (took 0.0853052 sec) SUBFIND: ngb iteration 20: need to repeat for 63804277 particles. (took 0.0829262 sec) SUBFIND: ngb iteration 21: need to repeat for 63792346 particles. (took 0.0832761 sec) SUBFIND: ngb iteration 22: need to repeat for 63769797 particles. (took 0.0849056 sec) SUBFIND: ngb iteration 23: need to repeat for 63726195 particles. (took 0.0878881 sec) SUBFIND: ngb iteration 24: need to repeat for 63647817 particles. (took 0.0914413 sec) SUBFIND: ngb iteration 25: need to repeat for 63506877 particles. (took 0.0969255 sec) SUBFIND: ngb iteration 26: need to repeat for 63255951 particles. (took 0.104567 sec) SUBFIND: ngb iteration 27: need to repeat for 62831570 particles. (took 0.115459 sec) SUBFIND: ngb iteration 28: need to repeat for 62152122 particles. (took 0.129031 sec) SUBFIND: ngb iteration 29: need to repeat for 61102308 particles. (took 0.147068 sec) SUBFIND: ngb iteration 30: need to repeat for 59550636 particles. (took 0.167409 sec) SUBFIND: ngb iteration 31: need to repeat for 57353772 particles. (took 0.190675 sec) SUBFIND: ngb iteration 32: need to repeat for 54347979 particles. (took 0.205608 sec) SUBFIND: ngb iteration 33: need to repeat for 50368475 particles. (took 0.217084 sec) SUBFIND: ngb iteration 34: need to repeat for 45314488 particles. (took 0.215225 sec) SUBFIND: ngb iteration 35: need to repeat for 39202292 particles. (took 0.206551 sec) SUBFIND: ngb iteration 36: need to repeat for 32238892 particles. (took 0.187389 sec) SUBFIND: ngb iteration 37: need to repeat for 24864858 particles. (took 0.161578 sec) SUBFIND: ngb iteration 38: need to repeat for 17698725 particles. (took 0.135711 sec) SUBFIND: ngb iteration 39: need to repeat for 11406823 particles. (took 0.107615 sec) SUBFIND: ngb iteration 40: need to repeat for 6486494 particles. (took 0.0785404 sec) SUBFIND: ngb iteration 41: need to repeat for 3175335 particles. (took 0.0520306 sec) SUBFIND: ngb iteration 42: need to repeat for 1295922 particles. (took 0.0312585 sec) SUBFIND: ngb iteration 43: need to repeat for 419157 particles. (took 0.0158702 sec) SUBFIND: ngb iteration 44: need to repeat for 104479 particles. (took 0.00708544 sec) SUBFIND: ngb iteration 45: need to repeat for 18336 particles. (took 0.00290393 sec) SUBFIND: ngb iteration 46: need to repeat for 2131 particles. (took 0.00109687 sec) SUBFIND: ngb iteration 47: need to repeat for 164 particles. (took 0.000414956 sec) SUBFIND: ngb iteration 48: need to repeat for 22 particles. (took 0.000282135 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 7.09218 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134135322 particles, for threshold size factor 0.6) SUBFIND: The other 2776345 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00518569 sec SUBFIND: particle balance=1.1197 SUBFIND: subfind_exchange() took 0.23717 sec SUBFIND: particle balance for processing=1.00051 SUBFIND: subdomain decomposition took 0.0514711 sec SUBFIND: serial subfind subdomain decomposition took 0.0510591 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=3214 took 32.2644 sec SUBFIND: root-task=0: Serial processing of halo 0 took 32.3894 SUBFIND: Processing overall took (total time=35.7196 sec) SUBFIND: 0 out of 1331 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258750 ALLOCATE: Changing to MaxPartSph = 123105 SUBFIND: subfind_exchange() (for return to original CPU) took 0.261646 sec TREE: Full tree construction for all particles. (presently allocated=81.4667 MB) GRAVTREE: Tree construction done. took 0.792394 sec =93402.8 NTopnodes=36881 NTopleaves=32271 tree-build-scalability=0.605597 SUBFIND: SO iteration 1: need to repeat for 2776338 halo centers. (took 0.0241074 sec) SUBFIND: SO iteration 2: need to repeat for 2776338 halo centers. (took 0.0217831 sec) SUBFIND: SO iteration 3: need to repeat for 2776338 halo centers. (took 0.0221103 sec) SUBFIND: SO iteration 4: need to repeat for 2776338 halo centers. (took 0.0220691 sec) SUBFIND: SO iteration 5: need to repeat for 2776338 halo centers. (took 0.0218983 sec) SUBFIND: SO iteration 6: need to repeat for 2776338 halo centers. (took 0.0221422 sec) SUBFIND: SO iteration 7: need to repeat for 2776338 halo centers. (took 0.0220989 sec) SUBFIND: SO iteration 8: need to repeat for 2776338 halo centers. (took 0.0218864 sec) SUBFIND: SO iteration 9: need to repeat for 2776338 halo centers. (took 0.0221555 sec) SUBFIND: SO iteration 10: need to repeat for 2776338 halo centers. (took 0.021957 sec) SUBFIND: SO iteration 11: need to repeat for 2776338 halo centers. (took 0.0220316 sec) SUBFIND: SO iteration 12: need to repeat for 2776338 halo centers. (took 0.0220326 sec) SUBFIND: SO iteration 13: need to repeat for 2776338 halo centers. (took 0.0220475 sec) SUBFIND: SO iteration 14: need to repeat for 2776338 halo centers. (took 0.0220741 sec) SUBFIND: SO iteration 15: need to repeat for 2776338 halo centers. (took 0.0219843 sec) SUBFIND: SO iteration 16: need to repeat for 276804 halo centers. (took 0.0214542 sec) SUBFIND: SO iteration 17: need to repeat for 2044 halo centers. (took 0.00814519 sec) SUBFIND: SO iteration 1: need to repeat for 2776338 halo centers. (took 0.0218607 sec) SUBFIND: SO iteration 2: need to repeat for 2776338 halo centers. (took 0.0215056 sec) SUBFIND: SO iteration 3: need to repeat for 2776338 halo centers. (took 0.021809 sec) SUBFIND: SO iteration 4: need to repeat for 2776338 halo centers. (took 0.0218571 sec) SUBFIND: SO iteration 5: need to repeat for 2776338 halo centers. (took 0.0219203 sec) SUBFIND: SO iteration 6: need to repeat for 2776338 halo centers. (took 0.0219352 sec) SUBFIND: SO iteration 7: need to repeat for 2776338 halo centers. (took 0.0218516 sec) SUBFIND: SO iteration 8: need to repeat for 2776338 halo centers. (took 0.0218442 sec) SUBFIND: SO iteration 9: need to repeat for 2776338 halo centers. (took 0.0218311 sec) SUBFIND: SO iteration 10: need to repeat for 2776338 halo centers. (took 0.021797 sec) SUBFIND: SO iteration 11: need to repeat for 2776338 halo centers. (took 0.0218859 sec) SUBFIND: SO iteration 12: need to repeat for 2776338 halo centers. (took 0.0217511 sec) SUBFIND: SO iteration 13: need to repeat for 2776338 halo centers. (took 0.0216968 sec) SUBFIND: SO iteration 14: need to repeat for 2776338 halo centers. (took 0.0218109 sec) SUBFIND: SO iteration 15: need to repeat for 2776338 halo centers. (took 0.0217852 sec) SUBFIND: SO iteration 16: need to repeat for 159149 halo centers. (took 0.0211733 sec) SUBFIND: SO iteration 17: need to repeat for 882 halo centers. (took 0.00640122 sec) SUBFIND: SO iteration 1: need to repeat for 2776338 halo centers. (took 0.0218584 sec) SUBFIND: SO iteration 2: need to repeat for 2776338 halo centers. (took 0.0214796 sec) SUBFIND: SO iteration 3: need to repeat for 2776338 halo centers. (took 0.0218664 sec) SUBFIND: SO iteration 4: need to repeat for 2776338 halo centers. (took 0.0219739 sec) SUBFIND: SO iteration 5: need to repeat for 2776338 halo centers. (took 0.0219206 sec) SUBFIND: SO iteration 6: need to repeat for 2776338 halo centers. (took 0.0216213 sec) SUBFIND: SO iteration 7: need to repeat for 2776338 halo centers. (took 0.0218627 sec) SUBFIND: SO iteration 8: need to repeat for 2776338 halo centers. (took 0.0218361 sec) SUBFIND: SO iteration 9: need to repeat for 2776338 halo centers. (took 0.021992 sec) SUBFIND: SO iteration 10: need to repeat for 2776338 halo centers. (took 0.0220641 sec) SUBFIND: SO iteration 11: need to repeat for 2776338 halo centers. (took 0.0222147 sec) SUBFIND: SO iteration 12: need to repeat for 2776338 halo centers. (took 0.0220047 sec) SUBFIND: SO iteration 13: need to repeat for 2776338 halo centers. (took 0.0221138 sec) SUBFIND: SO iteration 14: need to repeat for 2776338 halo centers. (took 0.0219382 sec) SUBFIND: SO iteration 15: need to repeat for 2776338 halo centers. (took 0.0218115 sec) SUBFIND: SO iteration 16: need to repeat for 279152 halo centers. (took 0.0215821 sec) SUBFIND: SO iteration 17: need to repeat for 2044 halo centers. (took 0.00891113 sec) SUBFIND: SO iteration 1: need to repeat for 2776338 halo centers. (took 0.0226299 sec) SUBFIND: SO iteration 2: need to repeat for 2776338 halo centers. (took 0.0221401 sec) SUBFIND: SO iteration 3: need to repeat for 2776338 halo centers. (took 0.0216479 sec) SUBFIND: SO iteration 4: need to repeat for 2776338 halo centers. (took 0.0215101 sec) SUBFIND: SO iteration 5: need to repeat for 2776338 halo centers. (took 0.0218951 sec) SUBFIND: SO iteration 6: need to repeat for 2776338 halo centers. (took 0.0216706 sec) SUBFIND: SO iteration 7: need to repeat for 2776338 halo centers. (took 0.02137 sec) SUBFIND: SO iteration 8: need to repeat for 2776338 halo centers. (took 0.0215664 sec) SUBFIND: SO iteration 9: need to repeat for 2776338 halo centers. (took 0.0215875 sec) SUBFIND: SO iteration 10: need to repeat for 2776338 halo centers. (took 0.0216454 sec) SUBFIND: SO iteration 11: need to repeat for 2776338 halo centers. (took 0.0215468 sec) SUBFIND: SO iteration 12: need to repeat for 2776338 halo centers. (took 0.0214227 sec) SUBFIND: SO iteration 13: need to repeat for 2776338 halo centers. (took 0.0213187 sec) SUBFIND: SO iteration 14: need to repeat for 2776338 halo centers. (took 0.0213239 sec) SUBFIND: SO iteration 15: need to repeat for 2776338 halo centers. (took 0.0214878 sec) SUBFIND: SO iteration 16: need to repeat for 2373874 halo centers. (took 0.0215463 sec) SUBFIND: SO iteration 17: need to repeat for 152657 halo centers. (took 0.0192951 sec) SUBFIND: SO iteration 18: need to repeat for 17277 halo centers. (took 0.00596862 sec) SUBFIND: determining spherical overdensity masses took 1.45356 sec SUBFIND: assembled and ordered groups and subhalos (took 0.272858 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_066' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 4.93793 sec, total size 1038.18 MB, corresponds to effective I/O rate of 210.246 MB/sec SUBFIND: Subgroup catalogues saved. took = 4.93981 sec SUBFIND: Finished with SUBFIND. (total time=51.0347 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2777669 SUBFIND: Largest subhalo has 98 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134134535 FOF: preparing output order of particles took 0.981573 sec SNAPSHOT: writing snapshot file #66 @ time 0.1 ... SNAPSHOT: writing snapshot file: 'output/snap_066' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_066.hdf5' to 'output/bak-snap_066.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 9.69962 sec, total size 5335.5 MB, corresponds to effective I/O rate of 550.073 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 34 (rank 34 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 28 (rank 28 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 583 (rank 583 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 627 (rank 627 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 619 (rank 619 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.