TACC: Starting up job 4244611 TACC: Starting parallel tasks... Shared memory islands host a minimum of 28 and a maximum of 28 MPI ranks. We shall use 32 MPI ranks in total for assisting one-sided communication (1 per shared memory node). ___ __ ____ ___ ____ ____ __ / __) /__\ ( _ \ / __)( ___)(_ _)___ /. | ( (_-. /(__)\ )(_) )( (_-. )__) )( (___)(_ _) \___/(__)(__)(____/ \___/(____) (__) (_) This is Gadget, version 4.0. Git commit 30019281bed6dcfb8d018c09095aeaa1e6ff5042, Wed Aug 11 12:22:28 2021 +0200 Code was compiled with the following compiler and flags: mpicxx -std=c++11 -Wwrite-strings -Wredundant-decls -Woverloaded-virtual -Wcast-qual -Wcast-align -Wpointer-arith -Wmissing-declarations -g -Wall -W -O3 -march=native -I/opt/apps/gcc9_1/hdf5/1.10.4/x86_64/include -I/opt/apps/gcc9_1/gsl/2.6/include -I/opt/apps/gcc9_1/impi19_0/fftw3/3.3.8/include -Ibuild -Isrc Code was compiled with the following settings: DOUBLEPRECISION=1 FOF FOF_GROUP_MIN_LEN=32 FOF_LINKLENGTH=0.2 FOF_PRIMARY_LINK_TYPES=2 FOF_SECONDARY_LINK_TYPES=1+16+32 GADGET2_HEADER IDS_64BIT NTYPES=6 PERIODIC PMGRID=128 SELFGRAVITY SUBFIND Running on 864 MPI tasks. BEGRUN: Size of particle structure 136 [bytes] BEGRUN: Size of sph particle structure 192 [bytes] BEGRUN: Size of gravity tree node 104 [bytes] BEGRUN: Size of neighbour tree node 192 [bytes] BEGRUN: Size of subfind auxiliary data 104 [bytes] ------------------------------------------------------------------------------------------------------------------------- AvailMem: Largest = 186305.27 Mb (on task= 810), Smallest = 186191.04 Mb (on task= 0), Average = 186276.79 Mb Total Mem: Largest = 191386.89 Mb (on task= 54), Smallest = 191386.76 Mb (on task= 0), Average = 191386.89 Mb Committed_AS: Largest = 5195.72 Mb (on task= 0), Smallest = 5081.62 Mb (on task= 810), Average = 5110.09 Mb SwapTotal: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb SwapFree: Largest = 0.00 Mb (on task= 0), Smallest = 0.00 Mb (on task= 0), Average = 0.00 Mb AllocMem: Largest = 5195.72 Mb (on task= 0), Smallest = 5081.62 Mb (on task= 810), Average = 5110.09 Mb avail /dev/shm: Largest = 95257.22 Mb (on task= 81), Smallest = 95257.12 Mb (on task= 16), Average = 95257.20 Mb ------------------------------------------------------------------------------------------------------------------------- Task=0 has the maximum commited memory and is host: c202-001.frontera.tacc.utexas.edu ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Obtaining parameters from file 'param.txt': InitCondFile lcdm_gas_littleendian.dat OutputDir output SnapshotFileBase snap OutputListFilename outputs_lcdm_gas.txt ICFormat 3 SnapFormat 3 TimeLimitCPU 180000 CpuTimeBetRestartFile 7200 MaxMemSize 3000 TimeBegin 0.0909091 TimeMax 1 ComovingIntegrationOn 1 Omega0 0.2814 OmegaLambda 0.7186 OmegaBaryon 0.0464 HubbleParam 0.697 Hubble 0.1 BoxSize 400000 OutputListOn 0 TimeBetSnapshot 1.83842 TimeOfFirstSnapshot 0.047619 TimeBetStatistics 0.05 NumFilesPerSnapshot 1 MaxFilesWithConcurrentIO 1 ErrTolIntAccuracy 0.012 CourantFac 0.15 MaxSizeTimestep 0.025 MinSizeTimestep 0 TypeOfOpeningCriterion 1 ErrTolTheta 0.9 ErrTolThetaMax 1 ErrTolForceAcc 0.0025 TopNodeFactor 2.5 ActivePartFracForNewDomainDecomp 0.01 DesNumNgb 64 MaxNumNgbDeviation 3 UnitLength_in_cm 3.08568e+21 UnitMass_in_g 1.989e+43 UnitVelocity_in_cm_per_s 100000 GravityConstantInternal 0 DesLinkNgb 20 SofteningComovingClass0 1.5 SofteningComovingClass1 1.5 SofteningComovingClass2 1.5 SofteningComovingClass3 1.5 SofteningComovingClass4 1.5 SofteningComovingClass5 1.5 SofteningMaxPhysClass0 1.5 SofteningMaxPhysClass1 1.5 SofteningMaxPhysClass2 1.5 SofteningMaxPhysClass3 1.5 SofteningMaxPhysClass4 1.5 SofteningMaxPhysClass5 1.5 SofteningClassOfPartType0 0 SofteningClassOfPartType1 0 SofteningClassOfPartType2 0 SofteningClassOfPartType3 0 SofteningClassOfPartType4 0 SofteningClassOfPartType5 0 ArtBulkViscConst 1 MinEgySpec 0 InitGasTemp 1000 MALLOC: Allocation of shared memory took 15.2063 sec BEGRUN: Hubble (internal units) = 0.1 BEGRUN: h = 0.697 BEGRUN: G (internal units) = 43018.7 BEGRUN: UnitMass_in_g = 1.989e+43 BEGRUN: UnitLenth_in_cm = 3.08568e+21 BEGRUN: UnitTime_in_s = 3.08568e+16 BEGRUN: UnitVelocity_in_cm_per_s = 100000 BEGRUN: UnitDensity_in_cgs = 6.76991e-22 BEGRUN: UnitEnergy_in_cgs = 1.989e+53 READIC: filenr=0, 'output/snap_066.hdf5' contains: READIC: Type 0 (gas): 64303009 (tot= 64303009) masstab= 0 READIC: Type 1: 69830036 (tot= 69830036) masstab= 0 READIC: Type 2: 0 (tot= 0) masstab= 0 READIC: Type 3: 0 (tot= 0) masstab= 0 READIC: Type 4: 2319 (tot= 2319) masstab= 0 READIC: Type 5: 0 (tot= 0) masstab= 0 READIC: Reading file `output/snap_066.hdf5' on task=0 and distribute it to 0 to 863. READIC: reading block 0 (Coordinates)... READIC: reading block 1 (Velocities)... READIC: reading block 2 (ParticleIDs)... READIC: reading block 3 (Masses)... READIC: reading block 4 (InternalEnergy)... READIC: reading block 5 (Density)... Dataset Density not present for particle type 0, using zero. READIC: reading block 6 (SmoothingLength)... Dataset SmoothingLength not present for particle type 0, using zero. READIC: reading done. Took 4.36871 sec, total size 6385.53 MB, corresponds to effective I/O rate of 1461.65 MB/sec READIC: Total number of particles : 134135364 INIT: Testing ID uniqueness... INIT: success. took=0.0597488 sec DOMAIN: Begin domain decomposition (sync-point 0). DOMAIN: Sum=4 TotalCost=4 NumTimeBinsToBeBalanced=1 MultipleDomains=4 DOMAIN: Increasing TopNodeAllocFactor=0.08 new value=0.104 DOMAIN: Increasing TopNodeAllocFactor=0.104 new value=0.1352 DOMAIN: Increasing TopNodeAllocFactor=0.1352 new value=0.17576 DOMAIN: Increasing TopNodeAllocFactor=0.17576 new value=0.228488 DOMAIN: Increasing TopNodeAllocFactor=0.228488 new value=0.297034 DOMAIN: Increasing TopNodeAllocFactor=0.297034 new value=0.386145 DOMAIN: Increasing TopNodeAllocFactor=0.386145 new value=0.501988 DOMAIN: Increasing TopNodeAllocFactor=0.501988 new value=0.652585 DOMAIN: Increasing TopNodeAllocFactor=0.652585 new value=0.84836 DOMAIN: Increasing TopNodeAllocFactor=0.84836 new value=1.10287 DOMAIN: Increasing TopNodeAllocFactor=1.10287 new value=1.43373 DOMAIN: Increasing TopNodeAllocFactor=1.43373 new value=1.86385 DOMAIN: Increasing TopNodeAllocFactor=1.86385 new value=2.423 DOMAIN: Increasing TopNodeAllocFactor=2.423 new value=3.1499 DOMAIN: Increasing TopNodeAllocFactor=3.1499 new value=4.09487 DOMAIN: NTopleaves=30878, determination of top-level tree involved 6 iterations and took 0.359102 sec DOMAIN: we are going to try at most 503 different settings for combining the domains on tasks=864, nnodes=32 DOMAIN: total_cost=4 total_load=2 DOMAIN: best solution found after 1 iterations by task=183 for nextra=196, reaching maximum imbalance of 1.11937|1.11973 DOMAIN: combining multiple-domains took 0.0153031 sec DOMAIN: exchange of 69832355 particles DOMAIN: particle exchange done. (took 0.212166 sec) DOMAIN: domain decomposition done. (took in total 0.5925 sec) PEANO: Begin Peano-Hilbert order... PEANO: done, took 0.0341183 sec. INIT: Converting u -> entropy All.cf_a3inv=1000 FOF: Begin to compute FoF group catalogue... (presently allocated=86.8382 MB) FOF: Comoving linking length: 11.3647 FOFTREE: Ngb-tree construction done. took 0.0519558 sec =71382.3 NTopnodes=35289 NTopleaves=30878 FOF: Start linking particles (presently allocated=98.7604 MB) FOF: linking of small cells took 0.000973709 sec FOF: local links done (took 0.0707395 sec, avg-work=0.062084, imbalance=1.12415). FOF: Marked=170454 out of the 69830036 primaries which are linked FOF: begin linking across processors (presently allocated=99.8057 MB) FOF: have done 16201 cross links (processed 170454, took 0.00381665 sec) FOF: have done 3257 cross links (processed 86957, took 0.00310943 sec) FOF: have done 521 cross links (processed 11809, took 0.00263578 sec) FOF: have done 79 cross links (processed 1956, took 0.00244462 sec) FOF: have done 7 cross links (processed 242, took 0.00236267 sec) FOF: have done 1 cross links (processed 19, took 0.00232743 sec) FOF: have done 0 cross links (processed 2, took 0.00233878 sec) FOF: Local groups found. FOF: primary group finding took = 0.0956454 sec FOF: Start finding nearest dm-particle (presently allocated=98.7604 MB) FOF: fof-nearest iteration 1: need to repeat for 62999325 particles. (took = 0.0470808 sec) FOF: fof-nearest iteration 2: need to repeat for 56481340 particles. (took = 0.0515083 sec) FOF: fof-nearest iteration 3: need to repeat for 37929625 particles. (took = 0.0551298 sec) FOF: fof-nearest iteration 4: need to repeat for 15162517 particles. (took = 0.0453717 sec) FOF: fof-nearest iteration 5: need to repeat for 2583590 particles. (took = 0.022767 sec) FOF: fof-nearest iteration 6: need to repeat for 47283 particles. (took = 0.00655901 sec) FOF: done finding nearest dm-particle FOF: attaching gas and star particles to nearest dm particles took = 0.232696 sec FOF: compiling local group data and catalogue took = 0.013352 sec FOF: Total number of FOF groups with at least 32 particles: 2280334 FOF: Largest FOF group has 117 particles. FOF: Total number of particles in FOF groups: 134135092 FOF: group properties are now allocated.. (presently allocated=90.285 MB) FOF: computation of group properties took = 0.00677067 sec FOF: start assigning group numbers FOF: Assigning of group numbers took = 0.233468 sec FOF: Finished computing FoF groups. Complete work took 0.754522 sec (presently allocated=87.7974 MB) SUBFIND: We now execute a parallel version of SUBFIND. TREE: Full tree construction for all particles. (presently allocated=92.986 MB) GRAVTREE: Tree construction done. took 0.151761 sec =88210.5 NTopnodes=35289 NTopleaves=30878 tree-build-scalability=0.600409 SUBFIND: finding total densities around all particles SUBFIND: ngb iteration 1: need to repeat for 125824457 particles. (took 0.431173 sec) SUBFIND: ngb iteration 2: need to repeat for 117096499 particles. (took 0.342507 sec) SUBFIND: ngb iteration 3: need to repeat for 108956572 particles. (took 0.291599 sec) SUBFIND: ngb iteration 4: need to repeat for 102172427 particles. (took 0.255513 sec) SUBFIND: ngb iteration 5: need to repeat for 96601026 particles. (took 0.227467 sec) SUBFIND: ngb iteration 6: need to repeat for 91272079 particles. (took 0.209994 sec) SUBFIND: ngb iteration 7: need to repeat for 84841305 particles. (took 0.198964 sec) SUBFIND: ngb iteration 8: need to repeat for 77433831 particles. (took 0.179636 sec) SUBFIND: ngb iteration 9: need to repeat for 71239055 particles. (took 0.154659 sec) SUBFIND: ngb iteration 10: need to repeat for 67441124 particles. (took 0.136112 sec) SUBFIND: ngb iteration 11: need to repeat for 65584044 particles. (took 0.126508 sec) SUBFIND: ngb iteration 12: need to repeat for 64804416 particles. (took 0.124384 sec) SUBFIND: ngb iteration 13: need to repeat for 64499871 particles. (took 0.125382 sec) SUBFIND: ngb iteration 14: need to repeat for 64382515 particles. (took 0.125048 sec) SUBFIND: ngb iteration 15: need to repeat for 64334290 particles. (took 0.122069 sec) SUBFIND: ngb iteration 16: need to repeat for 64302080 particles. (took 0.116459 sec) SUBFIND: ngb iteration 17: need to repeat for 64249481 particles. (took 0.108691 sec) SUBFIND: ngb iteration 18: need to repeat for 64157514 particles. (took 0.101031 sec) SUBFIND: ngb iteration 19: need to repeat for 64023726 particles. (took 0.0949157 sec) SUBFIND: ngb iteration 20: need to repeat for 63842919 particles. (took 0.0916639 sec) SUBFIND: ngb iteration 21: need to repeat for 63597042 particles. (took 0.0910431 sec) SUBFIND: ngb iteration 22: need to repeat for 63245609 particles. (took 0.0921475 sec) SUBFIND: ngb iteration 23: need to repeat for 62732347 particles. (took 0.0939178 sec) SUBFIND: ngb iteration 24: need to repeat for 61987710 particles. (took 0.0957099 sec) SUBFIND: ngb iteration 25: need to repeat for 60901011 particles. (took 0.0980229 sec) SUBFIND: ngb iteration 26: need to repeat for 59300279 particles. (took 0.102264 sec) SUBFIND: ngb iteration 27: need to repeat for 57022414 particles. (took 0.107182 sec) SUBFIND: ngb iteration 28: need to repeat for 53904442 particles. (took 0.113497 sec) SUBFIND: ngb iteration 29: need to repeat for 49847414 particles. (took 0.123572 sec) SUBFIND: ngb iteration 30: need to repeat for 44906736 particles. (took 0.132881 sec) SUBFIND: ngb iteration 31: need to repeat for 39404449 particles. (took 0.1424 sec) SUBFIND: ngb iteration 32: need to repeat for 33812976 particles. (took 0.146355 sec) SUBFIND: ngb iteration 33: need to repeat for 28551145 particles. (took 0.143956 sec) SUBFIND: ngb iteration 34: need to repeat for 23741516 particles. (took 0.136883 sec) SUBFIND: ngb iteration 35: need to repeat for 19251016 particles. (took 0.12111 sec) SUBFIND: ngb iteration 36: need to repeat for 14960025 particles. (took 0.102298 sec) SUBFIND: ngb iteration 37: need to repeat for 10970567 particles. (took 0.0843207 sec) SUBFIND: ngb iteration 38: need to repeat for 7447972 particles. (took 0.0676864 sec) SUBFIND: ngb iteration 39: need to repeat for 4574075 particles. (took 0.051263 sec) SUBFIND: ngb iteration 40: need to repeat for 2483982 particles. (took 0.0368251 sec) SUBFIND: ngb iteration 41: need to repeat for 1163712 particles. (took 0.0242995 sec) SUBFIND: ngb iteration 42: need to repeat for 454557 particles. (took 0.0148282 sec) SUBFIND: ngb iteration 43: need to repeat for 144663 particles. (took 0.00795672 sec) SUBFIND: ngb iteration 44: need to repeat for 36900 particles. (took 0.00372778 sec) SUBFIND: ngb iteration 45: need to repeat for 7447 particles. (took 0.00156467 sec) SUBFIND: ngb iteration 46: need to repeat for 1114 particles. (took 0.000710279 sec) SUBFIND: ngb iteration 47: need to repeat for 89 particles. (took 0.000360569 sec) SUBFIND: ngb iteration 48: need to repeat for 5 particles. (took 0.000246907 sec) SUBFIND: iteration to correct primary neighbor count and density estimate took 5.70497 sec SUBFIND: Number of FOF halos treated with collective SubFind algorithm = 0 SUBFIND: Number of processors used in different partitions for the collective SubFind code = 0 SUBFIND: (The adopted size-limit for the collective algorithm was 134135364 particles, for threshold size factor 0.6) SUBFIND: The other 2280334 FOF halos are treated in parallel with serial code SUBFIND: subfind_distribute_groups() took 0.00446334 sec SUBFIND: particle balance=1.11925 SUBFIND: subfind_exchange() took 0.238624 sec SUBFIND: particle balance for processing=1.00064 SUBFIND: subdomain decomposition took 0.0516529 sec SUBFIND: serial subfind subdomain decomposition took 0.0511554 sec SUBFIND: subfind_hbt_single_group() processing for Ngroups=2640 took 26.6059 sec SUBFIND: root-task=0: Serial processing of halo 0 took 26.7312 SUBFIND: Processing overall took (total time=29.5098 sec) SUBFIND: 0 out of 3350 decisions, fraction 0, where influenced by previous subhalo size ALLOCATE: Changing to MaxPart = 258750 ALLOCATE: Changing to MaxPartSph = 124041 SUBFIND: subfind_exchange() (for return to original CPU) took 0.261678 sec TREE: Full tree construction for all particles. (presently allocated=81.0591 MB) GRAVTREE: Tree construction done. took 0.810079 sec =88210.5 NTopnodes=35289 NTopleaves=30878 tree-build-scalability=0.600409 SUBFIND: SO iteration 1: need to repeat for 2280327 halo centers. (took 0.022497 sec) SUBFIND: SO iteration 2: need to repeat for 2280327 halo centers. (took 0.0204471 sec) SUBFIND: SO iteration 3: need to repeat for 2280327 halo centers. (took 0.0202094 sec) SUBFIND: SO iteration 4: need to repeat for 2280327 halo centers. (took 0.0201467 sec) SUBFIND: SO iteration 5: need to repeat for 2280327 halo centers. (took 0.0201 sec) SUBFIND: SO iteration 6: need to repeat for 2280327 halo centers. (took 0.020101 sec) SUBFIND: SO iteration 7: need to repeat for 2280327 halo centers. (took 0.0200985 sec) SUBFIND: SO iteration 8: need to repeat for 2280327 halo centers. (took 0.0200825 sec) SUBFIND: SO iteration 9: need to repeat for 2280327 halo centers. (took 0.0200461 sec) SUBFIND: SO iteration 10: need to repeat for 2280327 halo centers. (took 0.0200277 sec) SUBFIND: SO iteration 11: need to repeat for 2280327 halo centers. (took 0.0200707 sec) SUBFIND: SO iteration 12: need to repeat for 2280327 halo centers. (took 0.0200876 sec) SUBFIND: SO iteration 13: need to repeat for 2280327 halo centers. (took 0.0201564 sec) SUBFIND: SO iteration 14: need to repeat for 2280327 halo centers. (took 0.0200967 sec) SUBFIND: SO iteration 15: need to repeat for 2280327 halo centers. (took 0.0200897 sec) SUBFIND: SO iteration 16: need to repeat for 179707 halo centers. (took 0.0196339 sec) SUBFIND: SO iteration 17: need to repeat for 556 halo centers. (took 0.00667068 sec) SUBFIND: SO iteration 1: need to repeat for 2280327 halo centers. (took 0.020103 sec) SUBFIND: SO iteration 2: need to repeat for 2280327 halo centers. (took 0.0198035 sec) SUBFIND: SO iteration 3: need to repeat for 2280327 halo centers. (took 0.0200472 sec) SUBFIND: SO iteration 4: need to repeat for 2280327 halo centers. (took 0.0200475 sec) SUBFIND: SO iteration 5: need to repeat for 2280327 halo centers. (took 0.0200424 sec) SUBFIND: SO iteration 6: need to repeat for 2280327 halo centers. (took 0.0201362 sec) SUBFIND: SO iteration 7: need to repeat for 2280327 halo centers. (took 0.0200564 sec) SUBFIND: SO iteration 8: need to repeat for 2280327 halo centers. (took 0.0200968 sec) SUBFIND: SO iteration 9: need to repeat for 2280327 halo centers. (took 0.0199939 sec) SUBFIND: SO iteration 10: need to repeat for 2280327 halo centers. (took 0.0200472 sec) SUBFIND: SO iteration 11: need to repeat for 2280327 halo centers. (took 0.0203094 sec) SUBFIND: SO iteration 12: need to repeat for 2280327 halo centers. (took 0.0201447 sec) SUBFIND: SO iteration 13: need to repeat for 2280327 halo centers. (took 0.0200481 sec) SUBFIND: SO iteration 14: need to repeat for 2280327 halo centers. (took 0.0202319 sec) SUBFIND: SO iteration 15: need to repeat for 2280327 halo centers. (took 0.0200882 sec) SUBFIND: SO iteration 16: need to repeat for 103227 halo centers. (took 0.0196063 sec) SUBFIND: SO iteration 17: need to repeat for 333 halo centers. (took 0.004832 sec) SUBFIND: SO iteration 1: need to repeat for 2280327 halo centers. (took 0.0201955 sec) SUBFIND: SO iteration 2: need to repeat for 2280327 halo centers. (took 0.0199171 sec) SUBFIND: SO iteration 3: need to repeat for 2280327 halo centers. (took 0.0201057 sec) SUBFIND: SO iteration 4: need to repeat for 2280327 halo centers. (took 0.0200936 sec) SUBFIND: SO iteration 5: need to repeat for 2280327 halo centers. (took 0.020033 sec) SUBFIND: SO iteration 6: need to repeat for 2280327 halo centers. (took 0.020066 sec) SUBFIND: SO iteration 7: need to repeat for 2280327 halo centers. (took 0.0200437 sec) SUBFIND: SO iteration 8: need to repeat for 2280327 halo centers. (took 0.020028 sec) SUBFIND: SO iteration 9: need to repeat for 2280327 halo centers. (took 0.0200622 sec) SUBFIND: SO iteration 10: need to repeat for 2280327 halo centers. (took 0.0200377 sec) SUBFIND: SO iteration 11: need to repeat for 2280327 halo centers. (took 0.0200105 sec) SUBFIND: SO iteration 12: need to repeat for 2280327 halo centers. (took 0.0199719 sec) SUBFIND: SO iteration 13: need to repeat for 2280327 halo centers. (took 0.0202961 sec) SUBFIND: SO iteration 14: need to repeat for 2280327 halo centers. (took 0.0203018 sec) SUBFIND: SO iteration 15: need to repeat for 2280327 halo centers. (took 0.0202038 sec) SUBFIND: SO iteration 16: need to repeat for 181018 halo centers. (took 0.020058 sec) SUBFIND: SO iteration 17: need to repeat for 557 halo centers. (took 0.00670387 sec) SUBFIND: SO iteration 1: need to repeat for 2280327 halo centers. (took 0.0201223 sec) SUBFIND: SO iteration 2: need to repeat for 2280327 halo centers. (took 0.0201272 sec) SUBFIND: SO iteration 3: need to repeat for 2280327 halo centers. (took 0.0196191 sec) SUBFIND: SO iteration 4: need to repeat for 2280327 halo centers. (took 0.0197951 sec) SUBFIND: SO iteration 5: need to repeat for 2280327 halo centers. (took 0.0197662 sec) SUBFIND: SO iteration 6: need to repeat for 2280327 halo centers. (took 0.0197479 sec) SUBFIND: SO iteration 7: need to repeat for 2280327 halo centers. (took 0.0197621 sec) SUBFIND: SO iteration 8: need to repeat for 2280327 halo centers. (took 0.0197432 sec) SUBFIND: SO iteration 9: need to repeat for 2280327 halo centers. (took 0.01975 sec) SUBFIND: SO iteration 10: need to repeat for 2280327 halo centers. (took 0.0197946 sec) SUBFIND: SO iteration 11: need to repeat for 2280327 halo centers. (took 0.0198106 sec) SUBFIND: SO iteration 12: need to repeat for 2280327 halo centers. (took 0.0198577 sec) SUBFIND: SO iteration 13: need to repeat for 2280327 halo centers. (took 0.01976 sec) SUBFIND: SO iteration 14: need to repeat for 2280327 halo centers. (took 0.0197327 sec) SUBFIND: SO iteration 15: need to repeat for 2280327 halo centers. (took 0.0197193 sec) SUBFIND: SO iteration 16: need to repeat for 1864552 halo centers. (took 0.0196765 sec) SUBFIND: SO iteration 17: need to repeat for 173415 halo centers. (took 0.0174017 sec) SUBFIND: SO iteration 18: need to repeat for 13749 halo centers. (took 0.00638162 sec) SUBFIND: determining spherical overdensity masses took 1.33022 sec SUBFIND: assembled and ordered groups and subhalos (took 0.281572 sec) FOF/SUBFIND: writing group catalogue file: 'output/fof_subhalo_tab_066' (file 1 of 1) FOF/SUBFIND: writing group catalogue block 0 (GroupLen)... FOF/SUBFIND: writing group catalogue block 1 (GroupMass)... FOF/SUBFIND: writing group catalogue block 2 (GroupPos)... FOF/SUBFIND: writing group catalogue block 3 (GroupVel)... FOF/SUBFIND: writing group catalogue block 4 (GroupLenType)... FOF/SUBFIND: writing group catalogue block 5 (GroupOffsetType)... FOF/SUBFIND: writing group catalogue block 6 (GroupMassType)... FOF/SUBFIND: writing group catalogue block 7 (GroupAscale)... FOF/SUBFIND: writing group catalogue block 8 (Group_M_Mean200)... FOF/SUBFIND: writing group catalogue block 9 (Group_R_Mean200)... FOF/SUBFIND: writing group catalogue block 10 (Group_M_Crit200)... FOF/SUBFIND: writing group catalogue block 11 (Group_R_Crit200)... FOF/SUBFIND: writing group catalogue block 12 (Group_M_Crit500)... FOF/SUBFIND: writing group catalogue block 13 (Group_R_Crit500)... FOF/SUBFIND: writing group catalogue block 14 (Group_M_TopHat200)... FOF/SUBFIND: writing group catalogue block 15 (Group_R_TopHat200)... FOF/SUBFIND: writing group catalogue block 16 (GroupNsubs)... FOF/SUBFIND: writing group catalogue block 17 (GroupFirstSub)... FOF/SUBFIND: writing group catalogue block 18 (SubhaloGroupNr)... FOF/SUBFIND: writing group catalogue block 19 (SubhaloRankInGr)... FOF/SUBFIND: writing group catalogue block 20 (SubhaloLen)... FOF/SUBFIND: writing group catalogue block 21 (SubhaloMass)... FOF/SUBFIND: writing group catalogue block 22 (SubhaloPos)... FOF/SUBFIND: writing group catalogue block 23 (SubhaloVel)... FOF/SUBFIND: writing group catalogue block 24 (SubhaloLenType)... FOF/SUBFIND: writing group catalogue block 25 (SubhaloOffsetType)... FOF/SUBFIND: writing group catalogue block 26 (SubhaloMassType)... FOF/SUBFIND: writing group catalogue block 27 (SubhaloCM)... FOF/SUBFIND: writing group catalogue block 28 (SubhaloSpin)... FOF/SUBFIND: writing group catalogue block 29 (SubhaloVelDisp)... FOF/SUBFIND: writing group catalogue block 30 (SubhaloVmax)... FOF/SUBFIND: writing group catalogue block 31 (SubhaloVmaxRad)... FOF/SUBFIND: writing group catalogue block 32 (SubhaloHalfmassRad)... FOF/SUBFIND: writing group catalogue block 33 (SubhaloHalfmassRadType)... FOF/SUBFIND: writing group catalogue block 34 (SubhaloIDMostbound)... FOF/SUBFIND: writing group catalogue block 35 (SubhaloParentRank)... FOF/SUBFIND: Group catalogues saved. took = 4.8664 sec, total size 853.166 MB, corresponds to effective I/O rate of 175.317 MB/sec SUBFIND: Subgroup catalogues saved. took = 4.86795 sec SUBFIND: Finished with SUBFIND. (total time=43.2047 sec) SUBFIND: Total number of subhalos with at least 20 particles: 2283659 SUBFIND: Largest subhalo has 117 particles/cells. SUBFIND: Total number of particles/cells in subhalos: 134134680 FOF: preparing output order of particles took 0.920158 sec SNAPSHOT: writing snapshot file #66 @ time 0.1 ... SNAPSHOT: writing snapshot file: 'output/snap_066' (file 1 of 1) SNAPSHOT: writing snapshot rename 'output/snap_066.hdf5' to 'output/bak-snap_066.hdf5' SNAPSHOT: writing snapshot block 0 (Coordinates)... SNAPSHOT: writing snapshot block 1 (Velocities)... SNAPSHOT: writing snapshot block 2 (ParticleIDs)... SNAPSHOT: writing snapshot block 3 (Masses)... SNAPSHOT: writing snapshot block 4 (InternalEnergy)... SNAPSHOT: writing snapshot block 5 (Density)... SNAPSHOT: writing snapshot block 6 (SmoothingLength)... SNAPSHOT: done with writing snapshot. Took 8.75165 sec, total size 5341.06 MB, corresponds to effective I/O rate of 610.292 MB/sec endrun called, calling MPI_Finalize() bye! Abort(806969615) on node 731 (rank 731 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 743 (rank 743 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 748 (rank 748 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) Abort(806969615) on node 753 (rank 753 in comm 0): Fatal error in PMPI_Finalize: Other MPI error, error stack: PMPI_Finalize(214)...............: MPI_Finalize failed PMPI_Finalize(159)...............: MPID_Finalize(1288)..............: MPIDI_OFI_mpi_finalize_hook(1892): OFI domain close failed (ofi_init.c:1892:MPIDI_OFI_mpi_finalize_hook:Device or resource busy) TACC: MPI job exited with code: 15 TACC: Shutdown complete. Exiting.